Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013-
04-10] 254 sequences; 35,484,281 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq5 118 1e-21
seq9 91.5 1e-13
>seq5
Length=873697
Score = 118 bits (130), Expect = 1e-21
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 35509 TCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGC 35568
||| ||||| | | | |||||| || | |||| |||||| ||||||||||| || |
Sbjct 38665 TCCGCCACGAAGACGAAGCACCAAGTGCAGCGTAGACTCCTTCTGAATGTTGTAGTCAGA 38724
Query 35569 CAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGG 35628
| || | |||| |||||||| ||||| || || || | ||||||||||| | ||
Sbjct 38725 GAGCGTCCTACCGTCTTCCAGCTGTTTACCAGCGAAGATAAGACGCTGCTGGTCAGGTGG 38784
Query 35629 AACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCAC 35688
|| || ||||||||| |||||| || | | | | || ||||||||||| ||
Sbjct 38785 AATGCCCTCCTTGTCTTGGATCTTCGATTTGACGTTATCGATGGTATCGCTCGATTCAAC 38844
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||||| ||||| || || || || | ||| ||||| || ||||||||
Sbjct 38845 CTCCAAGGTGATGGTCTTGCCGGTGAGAGTCTTCACGAAGATCTGCAT 38892
Score = 109 bits (120), Expect = 5e-19
Identities = 127/169 (75%), Gaps = 2/169 (1%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || ||||||||||||| |||||| || | || || |||||||| || || ||
Sbjct 39441 CTCCTTCTGGATGTTGTAATCGGACAAGGTACGGCCATCCTCGAGCTGCTTGCCGGCGAA 39500
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
||||| |||||||| || | |||| || ||||||||| |||||| ||| | ||
Sbjct 39501 GATCAAGCGCTGCTGATCGGGGGGAATGCCTTCCTTGTCCTGGATCTTGCTCTTTA-CGT 39559
Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712
|| | | |||||| ||| |||||||| | ||||| || ||||| ||
Sbjct 39560 TGTCGATCGTGTCTGACGACTCCACCTCGAGGGTGATAGTCTTACCGGT 39608
>seq9
Length=754770
Score = 91.5 bits (100), Expect = 1e-13
Identities = 106/143 (74%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | | ||||| || | ||| ||||| || |||||||| ||||
Sbjct 276147 CCACCACGGAGACGGAGGACCAAGTGAAGCGTCGATTCCTTCTGGATGTTGTAGTCGGAG 276206
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| ||| || |||| || |||||||| || || || |||| ||||||||||||| |||
Sbjct 276207 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCCGGGGGA 276266
Query 35630 ACGCTCTCCTTGTCCATGATCTT 35652
| || |||||||||| ||||||
Sbjct 276267 ATGCCCTCCTTGTCCTGGATCTT 276289
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450792168730320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |