Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013- 04-10] 254 sequences; 35,484,281 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq5 116 4e-21 seq93 100 3e-16 seq9 91.5 1e-13 >seq5 Length=873697 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||| | ||| |||||||||||||| ||||| |||||||| Sbjct 38894 CCACCACGGAGACGGAGCACCAAGTGGAGCGTGGATTCCTTCTGAATATTGTAGTCCGAG 38953 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | || || | ||| ||||| || ||||| | ||| |||||||| || || Sbjct 38954 AGAGTACGCCCATCTTCTAACTGCTTGCCAGCGAAAATGAGACGTTGCTGATCTGGAGGG 39013 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || || ||||| || ||||| ||| | || || || || ||||| Sbjct 39014 ATACCCTCCTTATCCTGAATCTTCGACTTGACGTTGTCGATGGTATCCGATGACTCCACC 39073 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| |||||||| || || || || || || |||||||| ||||| Sbjct 39074 TCGAGCGTAATGGTCTTGCCAGTCAATGTCTTGACGAAAATCTGCAT 39120 Score = 109 bits (120), Expect = 6e-19 Identities = 135/185 (73%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || || || || || || ||||| || |||||||| ||| | ||| | || ||| Sbjct 39424 ACAAGATGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGACAAGGTACGGCCATCCTCG 39483 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| ||||| || || ||||| |||||||||||||| || |||||||| || || || Sbjct 39484 AGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGATCGGGGGGAATGCCTTCCTTGTCCTGG 39543 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || || || ||| | ||||| ||||| ||||| ||||| || || || ||| Sbjct 39544 ATCTTGCTCTTTACGTTGTCGATCGTGTCTGACGACTCCACCTCGAGGGTGATAGTCTTA 39603 Query 134685 CCGGT 134689 ||||| Sbjct 39604 CCGGT 39608 Score = 107 bits (118), Expect = 2e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || || ||||| || || || || ||||| || || ||||||||| | ||| | Sbjct 39131 AGGCGTAAGACGAGATGCAGAGTAGACTCCTTCTGGATATTGTAGTCGGATAGGGTACGG 39190 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || |||||||| ||||| || || ||||| ||||||||||| ||||| ||||| || Sbjct 39191 CCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGATCTGGCGGAATGCCCTCC 39250 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || ||||| || || || ||| | || |||||||| || || || || || Sbjct 39251 TTGTCCTGAATCTTCGACTTAACATTGTCAATGGTATCGGACGACTCGACCTCAAGCGTG 39310 Query 134676 ATGGTTTTACCGGT 134689 || ||||| ||||| Sbjct 39311 ATAGTTTTGCCGGT 39324 Score = 105 bits (116), Expect = 7e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 134483 CTTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC 134542 || ||| || | || || | ||| | ||| ||||| || ||||| |||||||||||||| Sbjct 38662 CTGTCCGCCACGAAGACGAAGCACCAAGTGCAGCGTAGACTCCTTCTGAATGTTGTAGTC 38721 Query 134543 GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGG 134602 | || | ||| || |||||||| || || || || | ||||||||| || || Sbjct 38722 AGAGAGCGTCCTACCGTCTTCCAGCTGTTTACCAGCGAAGATAAGACGCTGCTGGTCAGG 38781 Query 134603 CGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTC 134662 || ||||| || || ||||| || || |||||| || | || ||| |||||| Sbjct 38782 TGGAATGCCCTCCTTGTCTTGGATCTTCGATTTGACGTTATCGATGGTATCGCTCGATTC 38841 Query 134663 CACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || | || ||||| || ||||| | ||| || ||||| || ||||| Sbjct 38842 AACCTCCAAGGTGATGGTCTTGCCGGTGAGAGTCTTCACGAAGATCTGCAT 38892 >seq93 Length=73557 Score = 100 bits (110), Expect = 3e-16 Identities = 545/867 (63%), Gaps = 17/867 (2%) Strand=Plus/Plus Query 7537 ATCAACGGCGAATGCGCGGAACGAATTCAACACATGCTGTTGCGCGTGGCGGTGGGCATT 7596 ||||||||| | || ||||| |||||||||||| |||||||||| || ||||| Sbjct 31743 ATCAACGGCAAGGTTGCCGAACGCCCACAACACATGCTGATGCGCGTGGCTGTCGGCATC 31802 Query 7597 CACGGCGAAGACATTGACGCCGCCTTGGAAACGTACCAAATGATGTCTTTGAAACAGTTT 7656 |||||||| || || || ||| | || || ||| | ||||| ||| | || Sbjct 31803 CACGGCGAGGATATCGAGAAGGCCATCGAGACATACGACTACATGTCGCAGAAGTACTTC 31862 Query 7657 ACGCACGCTTCGCCCACCATGTTTGCCGCGGGCACAAACGCGCCTCAATTGTCCTCGTGT 7716 || |||||||| || || | || |||||| || ||||||| |||| || || Sbjct 31863 ACACACGCTTCCCCTACACTTTTCAACGCGGGTACCCCATCGCCTCAGATGTCGTCCTGC 31922 Query 7717 TTTTTGCTAACCATGCGCGAAGACAGCATCGACGGCATTTACAACACGCTGCGCGATTGC 7776 || | | |||| ||||||||||| || || || ||| | || || || Sbjct 31923 TTCCTCATCGACATGAAGGAAGACAGCATTGATGGAATCTACGATACACTTAAGACATGT 31982 Query 7777 GCCAATATTTCCAAATACGGCGGCGGAATAGGTCTGAACGTAAACGACGTGCGCGCCAAC 7836 || || ||||| || ||||| || ||||| ||||| || | | || |||| | Sbjct 31983 GCTTTGATCTCCAAGACCGCTGGCGGTATTGGTCTCAACGTGCACCGCATTCGTGCCACC 32042 Query 7837 GGTAGCCGCATCGTGTCCACCAACGGAAAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTG 7896 || | ||| | ||| ||||| | | | | ||| | |||||| | || || Sbjct 32043 GGCTCCTACATTGGTGGCACAAACGGTACATCGAATGGTCTCATTCCCATGCTCCGTGTC 32102 Query 7897 TTCAATAACGCGGTGCGACATGTAGACCAGGGGGG---AAAGCGCAAAGGCGCCGCTGCC 7953 | ||| ||| | | || | || |||||||| || ||||| ||| || ||| Sbjct 32103 TACAACAACACTGCTCGCTACGTCGACCAGGGTGGCAACAAGCGTCCAGGTGCTTTCGCC 32162 Query 7954 ATCTATTTGGAGCCGTGGCACGCGGACATTTACGCAGTGCTAAATCTGCGTCGCAACATG 8013 ||||| | |||||||||||||| || | | | | | | || ||| ||| Sbjct 32163 ATCTACCTCGAGCCGTGGCACGCTGATGTATTTGGCTTCTTGGACCTTCGTAAGAACCAC 32222 Query 8014 GGTTGCGAAGACAGCAAAGCGCGCGATCTATTCTTCGGATTGTGGGTGCCCGATCTGTTT 8073 || ||||| || ||||| || |||| || ||||| | |||||||| || Sbjct 32223 GGCAAGGAAGAGGTTCGTGCCCGCGACCTCTTCTACGCTCTGTGGATCCCCGATCTCTTC 32282 Query 8074 ATGAGGCGCGTTCATTTCGACGCACAATGGTCGCTCATGTGCCCCGATCGTTGC-CCTTT 8132 |||| ||| || || ||| | ||| |||| ||||||||| | || || || Sbjct 32283 ATGAAGCGTGTGCAGGAAAACGGCGAGTGGACGCTGATGTGCCCC-AACGAGGCTCCCGG 32341 Query 8133 ATTAAAAAACGTTTACGGTTCAAAATTTGAACAATTGTACAAACAATACGAACACGACGG 8192 | |||| |||||| | || || | | || | | || || | || || Sbjct 32342 CCTCGCGGACGTCTACGGTGATGAGTTCGAGGAGCTCTATCACCGCTATGAGAAGGAGGG 32401 Query 8193 CGCGTACGTGCGGCAAGTGAAAGCGCGCGACCTGCACC------GCGCCATTATCGAATG 8246 | |||| | | | || || ||| | || | | | ||||| |||| Sbjct 32402 C-----CGTG-GCCGCGAGACAGTGCGTGCCCAGAAGCTTTGGTATGCCATCCTCGAGGC 32455 Query 8247 TCAAAACGAAACCGGTATGCCGTACATGCTGTACAAAGACGCTTGCAACGCCAAAAGCAA 8306 ||| | || || |||| || | |||||| ||||| || || |||||| ||| ||||| Sbjct 32456 TCAGACGGAGACTGGTAACCCTTTCATGCTTTACAAGGATGCCTGCAACCGCAAGAGCAA 32515 Query 8307 TCAAAGCAACGTGGGCACCATTTGTTGCAGCAATCTGTGCGCTGAAATTGTACAGTACAG 8366 || | || | || ||||| | || ||| |||||| |||| || | |||||| Sbjct 32516 CCAGAAGAATCTCGGTACCATCCGCAGCTCCAACCTGTGCACTGAGATCATCGAGTACAC 32575 Query 8367 CGCGCCCGACGAAGTGGCCGTTTGCAA 8393 |||||| || || || || |||||||| Sbjct 32576 CGCGCCTGATGAGGTCGCTGTTTGCAA 32602 >seq9 Length=754770 Score = 91.5 bits (100), Expect = 1e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || | ||| ||||| |||||||| || |||||||||||| Sbjct 276147 CCACCACGGAGACGGAGGACCAAGTGAAGCGTCGATTCCTTCTGGATGTTGTAGTCGGAG 276206 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | ||| |||||||| ||||| || ||||||| |||||||| || || || Sbjct 276207 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCCGGGGGA 276266 Query 134607 ATGCCTTCTTTTTCTTGAATTTT 134629 ||||| || || || || || || Sbjct 276267 ATGCCCTCCTTGTCCTGGATCTT 276289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505396795360080