Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013-
04-10] 254 sequences; 35,484,281 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq5 116 4e-21
seq93 100 3e-16
seq9 91.5 1e-13
>seq5
Length=873697
Score = 116 bits (128), Expect = 4e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | ||| | ||| |||||||||||||| ||||| ||||||||
Sbjct 38894 CCACCACGGAGACGGAGCACCAAGTGGAGCGTGGATTCCTTCTGAATATTGTAGTCCGAG 38953
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| || | || || | ||| ||||| || ||||| | ||| |||||||| || ||
Sbjct 38954 AGAGTACGCCCATCTTCTAACTGCTTGCCAGCGAAAATGAGACGTTGCTGATCTGGAGGG 39013
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| || || || || ||||| || ||||| ||| | || || || || |||||
Sbjct 39014 ATACCCTCCTTATCCTGAATCTTCGACTTGACGTTGTCGATGGTATCCGATGACTCCACC 39073
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| |||||||| || || || || || || |||||||| |||||
Sbjct 39074 TCGAGCGTAATGGTCTTGCCAGTCAATGTCTTGACGAAAATCTGCAT 39120
Score = 109 bits (120), Expect = 6e-19
Identities = 135/185 (73%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564
|| || || || || || ||||| || |||||||| ||| | ||| | || |||
Sbjct 39424 ACAAGATGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGACAAGGTACGGCCATCCTCG 39483
Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624
||||| ||||| || || ||||| |||||||||||||| || |||||||| || || ||
Sbjct 39484 AGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGATCGGGGGGAATGCCTTCCTTGTCCTGG 39543
Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684
|| || || || ||| | ||||| ||||| ||||| ||||| || || || |||
Sbjct 39544 ATCTTGCTCTTTACGTTGTCGATCGTGTCTGACGACTCCACCTCGAGGGTGATAGTCTTA 39603
Query 134685 CCGGT 134689
|||||
Sbjct 39604 CCGGT 39608
Score = 107 bits (118), Expect = 2e-18
Identities = 140/194 (72%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| || || ||||| || || || || ||||| || || ||||||||| | ||| |
Sbjct 39131 AGGCGTAAGACGAGATGCAGAGTAGACTCCTTCTGGATATTGTAGTCGGATAGGGTACGG 39190
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
|| |||||||| ||||| || || ||||| ||||||||||| ||||| ||||| ||
Sbjct 39191 CCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGATCTGGCGGAATGCCCTCC 39250
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| || ||||| || || || ||| | || |||||||| || || || || ||
Sbjct 39251 TTGTCCTGAATCTTCGACTTAACATTGTCAATGGTATCGGACGACTCGACCTCAAGCGTG 39310
Query 134676 ATGGTTTTACCGGT 134689
|| ||||| |||||
Sbjct 39311 ATAGTTTTGCCGGT 39324
Score = 105 bits (116), Expect = 7e-18
Identities = 162/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 134483 CTTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC 134542
|| ||| || | || || | ||| | ||| ||||| || ||||| ||||||||||||||
Sbjct 38662 CTGTCCGCCACGAAGACGAAGCACCAAGTGCAGCGTAGACTCCTTCTGAATGTTGTAGTC 38721
Query 134543 GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGG 134602
| || | ||| || |||||||| || || || || | ||||||||| || ||
Sbjct 38722 AGAGAGCGTCCTACCGTCTTCCAGCTGTTTACCAGCGAAGATAAGACGCTGCTGGTCAGG 38781
Query 134603 CGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTC 134662
|| ||||| || || ||||| || || |||||| || | || ||| ||||||
Sbjct 38782 TGGAATGCCCTCCTTGTCTTGGATCTTCGATTTGACGTTATCGATGGTATCGCTCGATTC 38841
Query 134663 CACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || | || ||||| || ||||| | ||| || ||||| || |||||
Sbjct 38842 AACCTCCAAGGTGATGGTCTTGCCGGTGAGAGTCTTCACGAAGATCTGCAT 38892
>seq93
Length=73557
Score = 100 bits (110), Expect = 3e-16
Identities = 545/867 (63%), Gaps = 17/867 (2%)
Strand=Plus/Plus
Query 7537 ATCAACGGCGAATGCGCGGAACGAATTCAACACATGCTGTTGCGCGTGGCGGTGGGCATT 7596
||||||||| | || ||||| |||||||||||| |||||||||| || |||||
Sbjct 31743 ATCAACGGCAAGGTTGCCGAACGCCCACAACACATGCTGATGCGCGTGGCTGTCGGCATC 31802
Query 7597 CACGGCGAAGACATTGACGCCGCCTTGGAAACGTACCAAATGATGTCTTTGAAACAGTTT 7656
|||||||| || || || ||| | || || ||| | ||||| ||| | ||
Sbjct 31803 CACGGCGAGGATATCGAGAAGGCCATCGAGACATACGACTACATGTCGCAGAAGTACTTC 31862
Query 7657 ACGCACGCTTCGCCCACCATGTTTGCCGCGGGCACAAACGCGCCTCAATTGTCCTCGTGT 7716
|| |||||||| || || | || |||||| || ||||||| |||| || ||
Sbjct 31863 ACACACGCTTCCCCTACACTTTTCAACGCGGGTACCCCATCGCCTCAGATGTCGTCCTGC 31922
Query 7717 TTTTTGCTAACCATGCGCGAAGACAGCATCGACGGCATTTACAACACGCTGCGCGATTGC 7776
|| | | |||| ||||||||||| || || || ||| | || || ||
Sbjct 31923 TTCCTCATCGACATGAAGGAAGACAGCATTGATGGAATCTACGATACACTTAAGACATGT 31982
Query 7777 GCCAATATTTCCAAATACGGCGGCGGAATAGGTCTGAACGTAAACGACGTGCGCGCCAAC 7836
|| || ||||| || ||||| || ||||| ||||| || | | || |||| |
Sbjct 31983 GCTTTGATCTCCAAGACCGCTGGCGGTATTGGTCTCAACGTGCACCGCATTCGTGCCACC 32042
Query 7837 GGTAGCCGCATCGTGTCCACCAACGGAAAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTG 7896
|| | ||| | ||| ||||| | | | | ||| | |||||| | || ||
Sbjct 32043 GGCTCCTACATTGGTGGCACAAACGGTACATCGAATGGTCTCATTCCCATGCTCCGTGTC 32102
Query 7897 TTCAATAACGCGGTGCGACATGTAGACCAGGGGGG---AAAGCGCAAAGGCGCCGCTGCC 7953
| ||| ||| | | || | || |||||||| || ||||| ||| || |||
Sbjct 32103 TACAACAACACTGCTCGCTACGTCGACCAGGGTGGCAACAAGCGTCCAGGTGCTTTCGCC 32162
Query 7954 ATCTATTTGGAGCCGTGGCACGCGGACATTTACGCAGTGCTAAATCTGCGTCGCAACATG 8013
||||| | |||||||||||||| || | | | | | | || ||| |||
Sbjct 32163 ATCTACCTCGAGCCGTGGCACGCTGATGTATTTGGCTTCTTGGACCTTCGTAAGAACCAC 32222
Query 8014 GGTTGCGAAGACAGCAAAGCGCGCGATCTATTCTTCGGATTGTGGGTGCCCGATCTGTTT 8073
|| ||||| || ||||| || |||| || ||||| | |||||||| ||
Sbjct 32223 GGCAAGGAAGAGGTTCGTGCCCGCGACCTCTTCTACGCTCTGTGGATCCCCGATCTCTTC 32282
Query 8074 ATGAGGCGCGTTCATTTCGACGCACAATGGTCGCTCATGTGCCCCGATCGTTGC-CCTTT 8132
|||| ||| || || ||| | ||| |||| ||||||||| | || || ||
Sbjct 32283 ATGAAGCGTGTGCAGGAAAACGGCGAGTGGACGCTGATGTGCCCC-AACGAGGCTCCCGG 32341
Query 8133 ATTAAAAAACGTTTACGGTTCAAAATTTGAACAATTGTACAAACAATACGAACACGACGG 8192
| |||| |||||| | || || | | || | | || || | || ||
Sbjct 32342 CCTCGCGGACGTCTACGGTGATGAGTTCGAGGAGCTCTATCACCGCTATGAGAAGGAGGG 32401
Query 8193 CGCGTACGTGCGGCAAGTGAAAGCGCGCGACCTGCACC------GCGCCATTATCGAATG 8246
| |||| | | | || || ||| | || | | | ||||| ||||
Sbjct 32402 C-----CGTG-GCCGCGAGACAGTGCGTGCCCAGAAGCTTTGGTATGCCATCCTCGAGGC 32455
Query 8247 TCAAAACGAAACCGGTATGCCGTACATGCTGTACAAAGACGCTTGCAACGCCAAAAGCAA 8306
||| | || || |||| || | |||||| ||||| || || |||||| ||| |||||
Sbjct 32456 TCAGACGGAGACTGGTAACCCTTTCATGCTTTACAAGGATGCCTGCAACCGCAAGAGCAA 32515
Query 8307 TCAAAGCAACGTGGGCACCATTTGTTGCAGCAATCTGTGCGCTGAAATTGTACAGTACAG 8366
|| | || | || ||||| | || ||| |||||| |||| || | ||||||
Sbjct 32516 CCAGAAGAATCTCGGTACCATCCGCAGCTCCAACCTGTGCACTGAGATCATCGAGTACAC 32575
Query 8367 CGCGCCCGACGAAGTGGCCGTTTGCAA 8393
|||||| || || || || ||||||||
Sbjct 32576 CGCGCCTGATGAGGTCGCTGTTTGCAA 32602
>seq9
Length=754770
Score = 91.5 bits (100), Expect = 1e-13
Identities = 106/143 (74%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | || | ||| ||||| |||||||| || ||||||||||||
Sbjct 276147 CCACCACGGAGACGGAGGACCAAGTGAAGCGTCGATTCCTTCTGGATGTTGTAGTCGGAG 276206
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | ||| |||||||| ||||| || ||||||| |||||||| || || ||
Sbjct 276207 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCCGGGGGA 276266
Query 134607 ATGCCTTCTTTTTCTTGAATTTT 134629
||||| || || || || || ||
Sbjct 276267 ATGCCCTCCTTGTCCTGGATCTT 276289
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505396795360080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |