Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013- 04-10] 254 sequences; 35,484,281 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq93 98.7 3e-15 seq13 84.2 7e-11 >seq93 Length=73557 Score = 98.7 bits (108), Expect = 3e-15 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 254978 ATACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAA 255037 || || ||| ||||||| | ||||||| |||||||||||||| || || ||| ||| Sbjct 32085 ATTCCCATGCTCCGTGTCTACAACAACACTGCTCGCTACGTCGACCAGGGTGGCAACAAG 32144 Query 255038 CGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGA 255081 || ||||| || ||| |||||||||| |||||||||||||| || Sbjct 32145 CGTCCAGGTGCTTTCGCCATCTACCTCGAGCCGTGGCACGCTGA 32188 >seq13 Length=704243 Score = 84.2 bits (92), Expect = 7e-11 Identities = 116/161 (72%), Gaps = 1/161 (1%) Strand=Plus/Plus Query 443709 CGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCCAT 443768 || || ||||| || |||| ||||| || | || || || || ||| |||||||| Sbjct 439845 CGTCTTGTCGCGTTCGCTGCCGTCGAGGGTATCTTCTTCAGTGGTTCCTTC-GCCTCCAT 439903 Query 443769 CTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCAG 443828 ||||||| |||| ||||| || || |||| ||| || ||||| ||||| || || Sbjct 439904 CTTCTGGCTGAAGAAGCGCGGTCTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATTTC 439963 Query 443829 TCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCT 443869 || |||||||| |||| ||| |||||||| || |||| Sbjct 439964 GCGTGACGAGGGCATGCACACCGATTTCGCCTGCCTCCTCT 440004 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588330830959030