Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013-
04-10] 254 sequences; 35,484,281 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq93 268 1e-66
seq13 84.2 3e-11
>seq93
Length=73557
Score = 268 bits (296), Expect = 1e-66
Identities = 1111/1736 (64%), Gaps = 25/1736 (1%)
Strand=Plus/Minus
Query 110363 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATATGCATAGAAGAG 110422
||||| |||||||| || ||||| ||||| | |||||| || | ||||| || | |
Sbjct 33490 CGGAGGTAGTACATGCCCGTCTTTAGTCCGAGCTTCCATCCGGCGAAGTGCATGGAGGTG 33431
Query 110423 AGCTTGGACATCGTTGGACTTTCCATGAAGAGGTTCATACTTTGACTTTGGTCAATGAAG 110482
| |||| ||| || || | |||| || ||| | | ||| |||||| ||||||
Sbjct 33430 ATCTTGCCCATGGTAGGCTCCTTCATGTGGATGTTTAGAGACTGAGATTGGTCGATGAAG 33371
Query 110483 CGCCCCCGTTGTGCCGCCATATCAATGACATCCTTCATCTTA---ATTTCCCAAACTGTG 110539
|| || | || ||||| | ||| | | ||| || | || ||||| || ||
Sbjct 33370 GCTCCACGGTCAGCAGCCATCTGAATAATAG--TTCG-CTGAGAGATCTCCCAGACAGTC 33314
Query 110540 CGATAGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAACCCCCCGCC 110599
|| || ||||| | || || ||||| | | ||| | ||| || || ||| |
Sbjct 33313 TTGTATAGGGTCTTGGTCTCCTCGGGGATGTTGGGGATCCTTGCGATAGAGCCACCCTCG 33254
Query 110600 TTCACCATGAGATCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTGACG 110659
| || | | |||||| | || |||||| | || || | |||||| ||||
Sbjct 33253 GCGATGATACGGTTCTTCATGTTCTCGGACCACAAGCCCATGTCGACGAGGTCCTTGAGC 33194
Query 110660 AGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTT 110719
|| |||||||| ||||||||| |||||| || | |||||||||||
Sbjct 33193 AGCCATGGGTTGACAACCTGAAACTCACCAGCGAGGACTCGACGGGAGTAGATGTTTGAG 33134
Query 110720 GTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATT 110779
||||| || || ||||| || || || || | ||| || | |||||| || || |||||
Sbjct 33133 GTGTACGGCTCGAAGCACTCGTTGTTGCCAAGGATCTGGGAGGTGGACGCAGTGGGCATG 33074
Query 110780 GGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCC 110839
|| || || | || ||| || | ||| | || || ||||| || ||
Sbjct 33073 GGAGCAATGAGGAGGGAGTTGCGGACACCATGCTGAGCAATCTTCTCCTTCAGCGACGCC 33014
Query 110840 CAGTCGTAGTTGA-GCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGA 110898
||||| || | | | || | || |||| |||| ||| | || || | ||||| ||
Sbjct 33013 CAGTCCCAGAGGTCGGTAGGCGTGACGTTCC-ACATATCATATTGGAGGATGCCTTGAGA 32955
Query 110899 CGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGC 110958
| || || ||||| | || | ||| | || | | | || | || ||| |
Sbjct 32954 AACAGGCGAGCCCTCGTATGTCTTATATGGGCCGAGTTCCTTTGCAATGTCGCAGGAAGA 32895
Query 110959 CTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATC 111018
|| | || || || ||||| || ||||| || || | | ||| || ||
Sbjct 32894 GGTGAGAGCAGCATGGTAGATGGTCTCGAAGATCTGAATGTTGAGTTTCTTAGCCTCCGG 32835
Query 111019 TGAATCAAATGCGTAGCGGCACAA-AATAAATACATCCGCGAGACCTTGAACACCCAAAC 111077
||| || |||| | || ||| | || || |||| ||||||||||| ||||||| |
Sbjct 32834 TGATTCGAATG-GCAGGCGCAGAGCAAGGAAGGCATCGGCGAGACCTTGCACACCCATGC 32776
Query 111078 CAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGT 111137
||||||| | ||| || | || || || || ||||| || ||| |
Sbjct 32775 CAATAGGGCGGTGACGGAAGTTGCTACGACGTGCCTCTTCGACGGGGTAGTGATTGACTT 32716
Query 111138 CAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAAT 111197
| || | || ||||| || || | || |||| ||| || || || | | |
Sbjct 32715 CGATAATCTTATTCAGATTACGCGTCACGACCTGAGTGACTTCGTGCAGCTTCTGGAAGT 32656
Query 111198 CAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAA 111257
| || || | || | | ||| || ||| || || | || ||||| |||||||
Sbjct 32655 CGAACTCGCCACGCTTGTAGTCGACGAACGATGGGAGAGCAAGAGAAGCCAAGTTGCAAA 32596
Query 111258 CAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAA 111317
|||| |||||| | |||||||| | || || || || | |||||| || |
Sbjct 32595 CAGCGACCTCATCAGGCGCGGTGTACTCGATGATCTCAGTGCACAGGTTGGAGCTGCGGA 32536
Query 111318 TCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGG 111377
| || || | |||||| ||||| ||||| |||||| ||||||||||| |||||| | |
Sbjct 32535 TGGTACCGAGATTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAAAGCATGAAAG 32476
Query 111378 GCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAA-CATCGGCGGCTGGTACA 111436
| | || ||||||||||| | | ||| || || | ||||| | || | ||| | ||
Sbjct 32475 GGTTACCAGTCTCCGTCTGAGCCTCGAGGATGGCATACCAAAGCTTCTG-GGCACGCACT 32417
Query 111437 ATGGCGTTGGCCCGTCCCTCCGCCTCGTA-CTTTGTGTAGAGGGCTTCAAACTCCTCACC 111495
| || | | || |||||| ||| || | || ||||| | || ||||| |||||
Sbjct 32416 GTCTCGCGGCCACGGCCCTCCTTCTCATAGCGGTG-ATAGAGCTCCTCGAACTCATCACC 32358
Query 111496 CACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTC 111555
|||| | ||| || || |||| || || || | || | ||| | || |||
Sbjct 32357 GTAGACGTCCGCGAGGCCGGGAGCCTCGTTGGGGCACATCAGCGTCCACTCGCCGTTTTC 32298
Query 111556 CTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCG 111615
|| || ||||||||||| || || || |||||||| | | ||||| || | ||
Sbjct 32297 CTGCACACGCTTCATGAAGAGATCGGGGATCCACAGAGCGTAGAAGAGGTCGCGGGCACG 32238
Query 111616 AGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCA 111675
| ||||||| | || ||||| || | || | ||| | | | ||| ||||||||
Sbjct 32237 AACCTCTTCCTTGCCGTGGTTCTTACGAAGGTCCAAGAAGCCAAATACATCAGCGTGCCA 32178
Query 111676 TGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTGATTTACATA 111729
||||| || |||| |||| || || | ||||| ||| | || | || ||
Sbjct 32177 CGGCTCGAGGTAGATGGCGAAAGCACC---TGGACGCTTGTTGCCACCCTGGTCGACGTA 32121
Query 111730 GCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGT 111789
||| || ||| ||| | || || ||||| ||||| | ||||| ||| ||| |||||
Sbjct 32120 GCGAGCAGTGTTGTTGTAGACACGGAGCATGGGAATGAGACCATTCGATGTACCGTTTGT 32061
Query 111790 CCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGC 111849
|| | ||| || |||| | | || | || | |||||||| |||||
Sbjct 32060 GCCACCAATGTAGGAGCCGGTGGCACGAATGCGGTGCACGTTGAGACCAATACCGCCAGC 32001
Query 111850 CCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTC 111909
||| ||||| ||||| | |||| || | ||||| || | || ||| ||
Sbjct 32000 GGTCTTGGAGATCAAAGCACATGTCTTAAGTGTATCGTAGATTCCATCAATGCTGTCTTC 31941
Query 111910 CTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAG 111969
||| || |||| |||||||| |||||||| || ||| ||||| || ||||| ||
Sbjct 31940 CTTCATGTCGATGAGGAAGCAGGACGACATCTGAGGCGATGGGGTACCCGCGTTGAAAAG 31881
Query 111970 GGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAG 112028
|| || | ||||| |||| ||| | || ||||| | |||||||||||| | | |
Sbjct 31880 TGTAGGGGAAGCGTGTGTGAA-GTACTTCTGCGACATGTAGTCGTATGTCTCGATGGCCT 31822
Query 112029 AATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGGG 112084
|| || || || ||||||||||||| || || ||||| | ||||| ||||||
Sbjct 31821 TCTCGATATCCTCGCCGTGGATGCCGACAGCCACGCGCATCAGCATGTGTTGTGGG 31766
>seq13
Length=704243
Score = 84.2 bits (92), Expect = 3e-11
Identities = 336/523 (64%), Gaps = 22/523 (4%)
Strand=Plus/Minus
Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430
||||| || || |||||||| |||||||||||||| ||| | | | || || |||||
Sbjct 440281 TAGTCGCCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAAGGAGATATTCTCCATG 440222
Query 122431 AAGTCAAATGGATTCTTCGCGTTCCAAA--TGGGTGGCACC-----CCAACTTGTTTGAG 122483
||||| || || || | || || | | | |||| ||| |||| |||
Sbjct 440221 AAGTCGAAGGGGTTGGTGGCATTGTACACCTTGGTGTTACCGAGAGCCAA-------GAG 440169
Query 122484 GAGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAG 122543
||||| || | || |||||||||| | | |||| || |||||| |||| ||
Sbjct 440168 CAGACGGTCGGCAACGAACTCAATGTATTGGCACATGAGGGTAGCGTTCATGCCGAGCAG 440109
Query 122544 GTTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGAT 122603
|| || || || || | ||| | | ||| || || || || | | |||
Sbjct 440108 AGCGCAAGGCAGAGCCTCAGTCAGGAATTCCTGCTCGATTGTGACAGCTTCAGTGATGAT 440049
Query 122604 GGCGTGGATAGTTTCGGTAGTGGGTCTA---TTACGCAAAGTCTTGAAGAGCTCCACGGC 122660
||| |||| | || | |||| | | || | | || || ||| || |||
Sbjct 440048 GGCCTGGACCGACTCCTTGCTGGGACGAGTGTTCAGGAGAGAAAAGAGGAGG--CA-GGC 439992
Query 122661 AAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGG 122720
|| || ||| | ||||| || || ||||| || || || |||||| || || ||
Sbjct 439991 GAAATCGGTGTGCATGCCCTCGTCACGCGAAATGAGCTCGTTGGAGAAGGTGAGGCCGGG 439932
Query 122721 CATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACC 122780
||||||||| |||||||||| ||| | || | | ||| || || ||||||||||||
Sbjct 439931 CATGAGACCGCGCTTCTTCAGCCAGAAGATGGAGGCGAAGGAACCACTGAAGAAGATACC 439872
Query 122781 CTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAG-ACTTTGCATCAAACC 122839
||| || || ||||| | ||| || | || |||| | ||| ||| || | ||
Sbjct 439871 CTCGACGGCAGCGAACGCGACAAGACGGTTCGCAAAGGTG-GAGTTCTTATCAGAGATCC 439813
Query 122840 ATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGT 122882
|| || ||||| | |||||||| || ||||| || ||
Sbjct 439812 ATCGCAGAGCCCAGTCGGCCTTCTTGCGGATGCATGGAACTGT 439770
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628030005998400
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