Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013- 04-10] 254 sequences; 35,484,281 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq93 376 3e-99 seq13 123 3e-23 >seq93 Length=73557 Score = 376 bits (416), Expect = 3e-99 Identities = 1143/1744 (66%), Gaps = 34/1744 (2%) Strand=Plus/Minus Query 117837 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 117896 |||||||||||||| |||||||| || || ||||||| | | ||||| |||| Sbjct 33490 CGGAGGTAGTACATGCCCGTCTTTAGTCCGAGCTTCCATCCGGCGAAGTGCATGGAGGTG 33431 Query 117897 AACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 117956 | |||| | ||| || | |||| || ||| | | || ||||| ||||||||| Sbjct 33430 ATCTTGCCCATGGTAGGCTCCTTCATGTGGATGTTTAGAGACTGAGATTGGTCGATGAAG 33371 Query 117957 CGTCCCCGATCCGCCGCCATATCAATCACA--TCCTTCATCTTGATTTCCCACACAGTCC 118014 ||| || || || ||||| | ||| | | || | | ||| ||||| |||||| Sbjct 33370 GCTCCACGGTCAGCAGCCATCTGAATAATAGTTCGCTGAGA--GATCTCCCAGACAGTCT 33313 Query 118015 TGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCCT 118074 |||| ||| |||| | || || ||||| | ||| || ||| || |||||| | Sbjct 33312 TGTATAGGGTCTTGGTCTCCTCGGGGATGTTGGGGATCCTTGCGATAGAGCCACCCTCGG 33253 Query 118075 TGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGA 118134 || || | | |||||| | || ||||| | || || | ||| |||| | | Sbjct 33252 CGATGATACGGTTCTTCATGTTCTCGGACCACAAGCCCATGTCGACGAGGTCCTTGAGCA 33193 Query 118135 G--ATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGT 118192 | ||| | ||||||| ||||||||| |||||| || | ||||| || | Sbjct 33192 GCCATGGGT--TGACAACCTGAAACTCACCAGCGAGGACTCGACGGGAGTAGATGTTTGA 33135 Query 118193 CGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCAT 118252 ||||| ||||| |||||||| ||||| || | ||| |||| ||||| || |||||||| Sbjct 33134 GGTGTACGGCTCGAAGCACTCGTTGTTGCCAAGGATCTGGGAGGTGGACGCAGTGGGCAT 33075 Query 118253 GGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTC 118312 ||| || ||||| ||| ||| |||| ||| | | ||| ||||| || | | Sbjct 33074 GGGAGCAATGAGGAGGGAGTTGCGGACACCATGCTGAGCAATCTTCTCCTTCAGCGACGC 33015 Query 118313 CCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGA 118372 |||||| || | | | | | | |||||||||| | |||||||| ||||| || Sbjct 33014 CCAGTCCCAGAGGTCGGTAGGCGTGACGTTCCACATATCATATTGGAGGATGCCTTGAGA 32955 Query 118373 CGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGC 118432 | ||||| ||||| |||||| ||||||||| ||| || | ||| || | Sbjct 32954 AACAGGCGAGCCCTCGTATGTCTTATATGGGCCGAGTTCCTTTGCAATGTCGCAGGAAGA 32895 Query 118433 CTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTC 118492 ||| || || || || || || || || || || || | | ||| ||||| Sbjct 32894 GGTGAGAGCAGCATGGTAGATGGTCTCGAAGATCTGAATGTTGAGTTTCTTAGCCTCCGG 32835 Query 118493 GGAATCAAACGCGAGTCGGCACAA-AATAAATACATCCGCGAGACCTTGGACACCGAGGC 118551 || || || | || || || | || || |||| ||||||||||| ||||| | || Sbjct 32834 TGATTCGAATGGCAGGCG-CAGAGCAAGGAAGGCATCGGCGAGACCTTGCACACCCATGC 32776 Query 118552 CAATTGGGCGATGTCTCATATTAGACTTC--CGAGCGGTCTCCACGGGATAAAAATTCCT 118609 |||| ||||| || | | || || | || || || ||||| || ||| Sbjct 32775 CAATAGGGCGGTGACGGAAGTTG--CTACGACGTGCCTCTTCGACGGGGTAGTGATTGAC 32718 Query 118610 ATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTA 118669 ||||||| | |||| ||||| || || |||| |||| ||| || ||||| | | | Sbjct 32717 TTCGATAATCTTATTCAGATTACGCGTCACGACCTGAGTGACTTCGTGCAGCTTCTGGAA 32658 Query 118670 ATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACA 118729 || || || | || | | ||| || || || || | || |||| || || Sbjct 32657 GTCGAACTCGCCACGCTTGTAGTCGACGAACGATGGGAGAGCAAGAGAAGCCAAGTTGCA 32598 Query 118730 CACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTT 118789 |||| | |||||| | |||||||| || || || ||||||| ||| || || Sbjct 32597 AACAGCGACCTCATCAGGCGCGGTGTACTCGATGATCTCAGTGCACAGGTTGGAGCTGCG 32538 Query 118790 AATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTA 118849 ||||| || | ||||| || || ||| ||| || |||||||||||||||||| | Sbjct 32537 GATGGTACCGAGATTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAAAGCATGAA 32478 Query 118850 TGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCA 118908 || | || |||||||| || | || ||| || || | ||| | | || | || ||| Sbjct 32477 AGGGTTACCAGTCTCCGTCTGAGCCTCGAGGATGGCATACCAAAGCTTCTGG-GCACGCA 32419 Query 118909 CAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTG-TAGAGGGCTTCAAACTCTTCA 118967 | || || | | || ||||| | ||| || ||| ||||| | || ||||| ||| Sbjct 32418 CTGTCTCGCGGCCACGGCCCTCCTTCTCATAGCG-GTGATAGAGCTCCTCGAACTCATCA 32360 Query 118968 CCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCC 119027 || | | || | ||| || || |||| | ||||| | || | ||| | || Sbjct 32359 CCGTAGACGTCCGCGAGGCCGGGAGCCTCGTTGGGGCACATCAGCGTCCACTCGCCGTTT 32300 Query 119028 TCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAG 119087 |||| || |||||||||||||| || |||||||| || || ||||||| || || Sbjct 32299 TCCTGCACACGCTTCATGAAGAGATCGGGGATCCACAGAGCGTAGAAGAGGTCGCGGGCA 32240 Query 119088 CGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGC 119147 ||| | ||||| | || || || ||| | ||||| ||| | | | ||| |||||| Sbjct 32239 CGAACCTCTTCCTTGCCGTGGTTCTTACGAAGGTCCAAGAAGCCAAATACATCAGCGTGC 32180 Query 119148 CACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG------ACCAGCCTGGTTTACA 119201 ||||| || ||||| | |||| | | ||| |||| ||| |||||| || Sbjct 32179 CACGGCTCGAGGTAGATGGCGAAAG-CACCT--GGACGCTTGTTGCCACCCTGGTCGACG 32123 Query 119202 TACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGGCCATTT 119261 || | |||||| ||| | ||||| ||||| ||||||| ||||| ||| || ||| Sbjct 32122 TAGCGAGCAGTGTTGTTGTAGACACGGAGCATGGGAATGAGACCATTCGATGTACCGTTT 32063 Query 119262 GTCCCCCGAA--TACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCAATACCCC 119319 || || | || || ||| | |||| | | ||| | || | ||||||||| | Sbjct 32062 GTGCCACCAATGTAGGAGCC--GGTGGCACGAATGCGGTGCACGTTGAGACCAATACCGC 32005 Query 119320 CTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGT 119379 | || ||| ||||| || || | | || | ||||||| ||||| || || Sbjct 32004 CAGCGGTCTTGGAGATCAAAGCACATGTCTTAAGTGTATCGTAGATTCCATCAATGCTGT 31945 Query 119380 CACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGA 119439 | |||| | |||||||||||||| |||||| |||||| || ||||| ||||||| Sbjct 31944 CTTCCTTCATGTCGATGAGGAAGCAGGACGACATCTGAGGCGATGGGGTACCCGCGTTGA 31885 Query 119440 AGAGAGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTTGTCGTAGGTCTCCAAG 119498 | || || || | ||||| |||| ||| | || ||||| | |||||| ||||| | | Sbjct 31884 AAAGTGTAGGGGAAGCGTGTGTGAA-GTACTTCTGCGACATGTAGTCGTATGTCTCGATG 31826 Query 119499 ACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTG-GGG 119557 | || || || ||||| || |||| | || ||||| | ||||| ||| ||| Sbjct 31825 GCCTTCTCGATATCCTCGCCGTGGATGCCGACAGCCACGCGCATCAGCATGTGTTGTGGG 31766 Query 119558 TGTT 119561 ||| Sbjct 31765 CGTT 31762 >seq13 Length=704243 Score = 123 bits (136), Expect = 3e-23 Identities = 302/453 (67%), Gaps = 10/453 (2%) Strand=Plus/Minus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 ||||| ||||| ||||||||||||||||| ||||| || ||||| |||||||||||| Sbjct 440281 TAGTCGCCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAAGGAGATATTCTCCATG 440222 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAA--TTGCTGGCACTCCAATCTGTTTGAGGAGAC 129845 || || || ||||| | | || | | ||| || || | | ||| |||| Sbjct 440221 AAGTCGAAGGGGTTGGTGGCATTGTACACCTTGGTGTTACCGAGAGCCAA--GAGCAGAC 440164 Query 129846 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTAC 129905 | || | ||| |||||||||| | |||| | |||||| |||| || | Sbjct 440163 GGTCGGCAACGAACTCAATGTATTGGCACATGAGGGTAGCGTTCATGCCGAGCAGAGCGC 440104 Query 129906 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGT 129965 | || || || || | ||| ||| ||| || |||||||| | |||||| | Sbjct 440103 AAGGCAGAGCCTCAGTCAGGAATTCCTGCTCGATTGTGACAGCTTCAGTGATGATGGCCT 440044 Query 129966 GAATGGTCTCCGTGCCAGGTCTATTGCGCAA---AGTCTTGAAGAGTTCCACGGCAAACT 130022 | | | |||| ||| || | | || || || || ||| || ||| || | Sbjct 440043 GGACCGACTCCTTGCTGGGACGAGTGTTCAGGAGAGAAAAGAGGAGG--CA-GGCGAAAT 439987 Query 130023 CCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGA 130082 | ||| | ||||||||||| || ||||| || || |||||| || || ||||||| Sbjct 439986 CGGTGTGCATGCCCTCGTCACGCGAAATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATGA 439927 Query 130083 GACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCA 130142 |||| |||||||||| |||||| || | || || ||| ||||||||| ||||| | Sbjct 439926 GACCGCGCTTCTTCAGCCAGAAGATGGAGGCGAAGGAACCACTGAAGAAGATACCCTCGA 439867 Query 130143 CACACGCGAACGCAAAGAGACGCTCAGCAAAGG 130175 | |||||||| | ||||| | ||||||| Sbjct 439866 CGGCAGCGAACGCGACAAGACGGTTCGCAAAGG 439834 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618433236468240