Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013- 04-10] 254 sequences; 35,484,281 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq93 279 6e-70 seq13 125 8e-24 seq5 91.5 2e-13 >seq93 Length=73557 Score = 279 bits (308), Expect = 6e-70 Identities = 966/1486 (65%), Gaps = 27/1486 (2%) Strand=Plus/Plus Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGT 104280 |||||| ||||| | ||||||||||| |||| || || || || || || || | Sbjct 31766 CCCACAACACATGCTGATGCGCGTGGCTGTCGGCATCCACGGCGAGGATATCGAGAAGGC 31825 Query 104281 CTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCT 104339 | | |||||||||||| | ||||| || | ||| |||| ||||| | || || || | Sbjct 31826 CATCGAGACATACGACTACATGTCGCAGAAGTAC-TTCACACACGCTTCCCCTACACTTT 31884 Query 104340 TCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 104399 |||| || ||||| ||| || || ||||| |||||||| |||| || ||||| | Sbjct 31885 TCAACGCGGGTACCCCATCGCCTCAGATGTCGTCCTGCTTCCTCATCGACATGAAGGAAG 31944 Query 104400 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 104459 || || | || ||||| | || |||| | ||||| ||||| ||| |||| Sbjct 31945 ACAGCATTGATGGAATCTACGATACACTTAAGACATGTGCTTTGATCTCCAAGACCGCTG 32004 Query 104460 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 104519 | |||||||| | || | || | | |||| || ||| | || |||| Sbjct 32005 GCGGTATTGGTCTCAACGTGCACCGCATTCGTGCCACCGGCTCCTACATTGGTGGCACAA 32064 Query 104520 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 104579 | ||| ||| ||||| | ||||| ||||| || || | ||| ||| || ||||| | Sbjct 32065 ACGGTACATCGAATGGTCTCATTCCCATGCTCCGTGTCTACAACAACACTGCTCGCTACG 32124 Query 104580 TAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGC 104633 | | || | ||| ||||| | || || |||| |||| || ||||| |||| Sbjct 32125 TCGACCAGGGTGGCAACAAGCGTCCA---GGTGCTTTCGCCATCTACCTCGAGCCGTGGC 32181 Query 104634 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGT 104693 |||| ||| | | | ||| | || | ||| ||||| || | || |||| || Sbjct 32182 ACGCTGATGTATTTGGCTTCTTGGACCTTCGTAAGAACCACGGCAAGGAAGAGGTTCGTG 32241 Query 104694 GCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 104753 |||||| ||||||| |||||| ||||| || ||||||||||||||| | || |||| | Sbjct 32242 CCCGCGACCTCTTCTACGCTCTGTGGATCCCCGATCTCTTCATGAAGCGTGTGCAGGAAA 32301 Query 104754 GTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTG 104813 ||| | ||| | || | || || || |||| || || ||| | || | | |||| Sbjct 32302 ACGGCGAGTGGACGCTGATGTGCCCCAACGAGGCTCCCGGCCTCGCGGACGTCTACGGTG 32361 Query 104814 AGGAGTTTGAAGCCCTTTA-CACAAAGTACGAGGAAGAAGGTCG-GGCGACTGCGACGGT 104871 | ||||| || | || || ||| || ||| | || || || ||| | | ||| || Sbjct 32362 ATGAGTTCGAGGAGCTCTATCAC-CGCTATGAGAAGGAGGGCCGTGGCCGC-GAGACAGT 32419 Query 104872 GCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 104930 || || | || | | ||| | || || ||| || |||| || |||||||||| || | Sbjct 32420 GCGTGC-CCAGAAGCTTTGGTATGCCATCCTCGAGGCTCAGACGGAGACTGGTAACCCTT 32478 Query 104931 ACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 104990 |||||||||||| || ||||| |||| ||||| || || |||||| | ||| ||| Sbjct 32479 TCATGCTTTACAAGGATGCCTGCAACCGCAAGAGCAACCAGAAGAATCTCGGTACCATCC 32538 Query 104991 AGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGT 105050 || ||||| || || || || ||| | || | || | |||||| ||||| | Sbjct 32539 GCAGCTCCAACCTGTGCACTGAGATCATCGAGTACACCGCGCCTGATGAGGTCGCTGTTT 32598 Query 105051 GTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACA-TTTGAT 105109 | ||| | || || | |||||||| || || || | | | | | | || || Sbjct 32599 GCAACTTGGCTTCTCTTGCTCTCCCATCGTTCGTCGA-CTACAAGCGTGGCGAGTTCGAC 32657 Query 105110 TATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGAT 105169 | | || || |||||||| || | || || || || || | |||| || Sbjct 32658 TTCCAGAAGCTGCACGAAGTCACTCAGGTCGTGACGCGTAATCTGAATAAGATTATCGAA 32717 Query 105170 AGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGT 105229 ||| |||||||| || || ||| || | | ||||| || ||||| Sbjct 32718 GTCAATCACTACCCCGTCGAAGAGGCACGTCGTAGCAACTTCCGTCACCGCCCTATTGGC 32777 Query 105230 CTCGGTGTTCAGGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATTTGATTCCGA 105288 | ||||| || |||||||| |||| ||| || || || |||| |||| || || Sbjct 32778 ATGGGTGTGCAAGGTCTCGCCGATGCCTTCCTTGCTCTG-CGCCTGCCATTCGAATCACC 32836 Query 105289 CGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGC 105348 || || ||| || |||| | || || |||||||| || || || ||||| | Sbjct 32837 GGAGGCTAAGAAACTCAACATTCAGATCTTCGAGACCATCTACCATGCTGCTCTCACCTC 32896 Query 105349 GAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTC 105408 | || | ||| ||| || |||||| | || | ||||| || || | ||| Sbjct 32897 TTCCTGCGACATTGCAAAGGAACTCGGCCCATATAAGACATACGAGGGCTCGCCTGTTTC 32956 Query 105409 ACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGC-TTCACTACGACTGGG 105467 ||||| | || |||| |||||||| |||| || | || | | | || ||||||| Sbjct 32957 TCAAGGCATCCTCCAATATGATATGT-GGAACGTCACGCCTACCGACCTCTGGGACTGGG 33015 Query 105468 AAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAA 105527 | || ||||| || || | ||| | || ||| |||||||| ||||| | Sbjct 33016 CGTCGCTGAAGGAGAAGATTGCTCAGCATGGTGTCCGCAACTCCCTCCTCATTGCTCCCA 33075 Query 105528 TGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGA 105587 |||| || || |||||| | || ||| | || || || || ||||| || || ||||| Sbjct 33076 TGCCCACTGCGTCCACCTCCCAGATCCTTGGCAACAACGAGTGCTTCGAGCCGTACACCT 33135 Query 105588 CGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCAT--CT 105645 | |||||||| | || |||||| || |||||| | |||||||| ||| || Sbjct 33136 CAAACATCTACTCCCGTCGAGTCCTCGCTGGTGAGTTTCAGGTTGTCAAC--CCATGGCT 33193 Query 105646 CGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAG 105691 | | |||||| || || || | |||||| || | |||||| Sbjct 33194 GCTCAAGGACCTCGTCGACATGGGCTTGTGGTCCGAGAACATGAAG 33239 >seq13 Length=704243 Score = 125 bits (138), Expect = 8e-24 Identities = 154/209 (74%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 94732 ACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTT---TGATACAAAG 94788 |||||||| || || | ||||| || || |||||| || ||| | ||||| || Sbjct 439770 ACAGTTCCATGCATCCGCAAGAAGGCCGACTGGGCTCTGCGATGGATCTCTGATAAGAAC 439829 Query 94789 TCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCT 94848 || ||||||| | || || |||| || || || ||||||||||||||| | Sbjct 439830 TCCA---CCTTTGCGAACCGTCTTGTCGCGTTCGCTGCCGTCGAGGGTATCTTCTTCAGT 439886 Query 94849 GGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTC 94908 ||||||||| | | || | ||||| |||||||| ||||||||||| || ||| |||| Sbjct 439887 GGTTCCTTCGCCTCCATCTTCTGGCTGAAGAAGCGCGGTCTCATGCCCGGCCTCACCTTC 439946 Query 94909 TCCAACGAGCTTATCTCTCGTGACGAGGG 94937 ||||||||||| || || ||||||||||| Sbjct 439947 TCCAACGAGCTCATTTCGCGTGACGAGGG 439975 >seq5 Length=873697 Score = 91.5 bits (100), Expect = 2e-13 Identities = 269/406 (66%), Gaps = 19/406 (5%) Strand=Plus/Plus Query 9488 CGTCCCCGAACACTTGGGAGAGCTACTTGGATCTTACGATCAAAGCGACCTGGACGAAGG 9547 || || | |||| |||||| |||| || | | ||||| ||||| || || || ||| Sbjct 86431 CGCCCTCCAACATCTGGGAGCTCTACCTGAACGTGGCGATCGAAGCGTCCGGGTCGGAGG 86490 Query 9548 AGCGCGTCATCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACAATACCTGTTTCA 9607 || || | ||||| | ||| | | || || ||||| || | || | ||| || Sbjct 86491 AGAGCCTGGTCAAGAAGCTCAGGGTGGTTGGTAGCGGCAATAAAAATGACACCGGTGCTC 86550 Query 9608 TTATCAAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTC 9667 | |||||||||||| | || | | |||||| || | ||||| || | | || Sbjct 86551 TGATCAAAACCATCGAGATCGTTGAGAAGTTGATTTAGGGTTTGA---CGGTGGTAGTT- 86606 Query 9668 GCTGGCATACCACCAGCACTGCGTTGCTTTCC---CACGGCATCAATCTCATCAATGAAG 9724 ||||| | | | || | ||||||| ||||||||| | ||| || ||||| Sbjct 86607 ---GGCATCGCGCGA---CTT--TCGCTTTCCGCCCACGGCATCGAGCTCGTCGATGAAT 86658 Query 9725 ACGAT-GCATGGTTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCC 9783 ||||| ||| ||| || |||| || || ||||| || || |||||||| || || Sbjct 86659 ACGATAGCA-GGTGCTTTGGCGCGCGCAGCTGTGAAGAGCTCGCGGACACGCTTAGCTCC 86717 Query 9784 CACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACAT-TGGATGAAGGGGACATTAG 9842 ||||| ||| | | ||| | || | | | | |||| | || |||||||||| | Sbjct 86718 GACACCCACATAGACCTCGTCGAATTCAGAACCAG-ACATGTAGAAGAAGGGGACACCGG 86776 Query 9843 ATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGG 9888 ||| || |||| || ||||| || || |||||||| ||||| || Sbjct 86777 CTTCGCCTGCAACAGCACGGGCAAGCAGCGTCTTACCGGTACCAGG 86822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583258948146960