Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013- 04-10] 254 sequences; 35,484,281 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq93 345 5e-90 seq13 96.9 4e-15 >seq93 Length=73557 Score = 345 bits (382), Expect = 5e-90 Identities = 923/1398 (66%), Gaps = 26/1398 (2%) Strand=Plus/Minus Query 78508 AACTCGCCGGCCAGGGTCCGGCGCAGGTAGATGTTGGTCGTGTACGGCTCGAAAGCCTCG 78567 ||||| || || ||| || || ||||||||| | |||||||||||||| |||| Sbjct 33172 AACTCACCAGCGAGGACTCGACGGGAGTAGATGTTTGAGGTGTACGGCTCGAAGCACTCG 33113 Query 78568 TTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCGGCATGGGTGCGACCAGTAGAGAATTC 78627 ||||| || | |||||||| ||| || || || |||||||| || | || || || || Sbjct 33112 TTGTTGCCAAGGATCTGGGAGGTGGACGCAGTGGGCATGGGAGCAATGAGGAGGGAGTTG 33053 Query 78628 CGAAGACCATGCGTCTTGATCTCGACCTTTAG----GCC--GTCCCAAAATTCATTCGCC 78681 || | ||||||| |||| |||| || ||| |||||| | || | | | Sbjct 33052 CGGACACCATGCTGAGCAATCTTCTCCTTCAGCGACGCCCAGTCCCAGAGGTCGGTAGGC 32993 Query 78682 GCGATCCCCCACATGTCCGGTTGAAGGATACCCTCGGACGCCGGCGACCCCTTGAACGTC 78741 | || |||||| || ||| ||||| || | || | ||||| |||| | | ||| Sbjct 32992 GTGACGTTCCACATATCATATTGGAGGATGCCTTGAGAAACAGGCGAGCCCTCGTATGTC 32933 Query 78742 TCGTAAGATCCCTCCTCCTTGGCGAGTTCGCATGACTCGAGCAGGGCCGCGTGGTACACA 78801 | || | || ||||| || | ||||| || | || || || ||||| | Sbjct 32932 TTATATGGGCCGAGTTCCTTTGCAATGTCGCAGGAAGAGGTGAGAGCAGCATGGTAGATG 32873 Query 78802 GCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCCTTGGTCTCGTCGAACGAAAGGCC--GA 78859 | ||||||||| ||||||| | |||| | ||||| | |||| || Sbjct 32872 GTCTCGAAGATCTGAATGTTGAGTTTCTTAGCCTCCGGTGATTCGAATGGCAGGCGCAGA 32813 Query 78860 GCATCATGAAGACATCGGCCAGGCCCTGGACGCCGATAGCGATCGGTCGGTGGCGCATGT 78919 ||| | |||| ||||||| || || || || || || | || || ||||| || | || Sbjct 32812 GCA--AGGAAGGCATCGGCGAGACCTTGCACACCCATGCCAATAGGGCGGTGACGGAAGT 32755 Query 78920 TGCTCTTTCGGGCCGCCTCGGTCGGGTAAAAGTTCCGATCGATGACGCGGTTCAGGTTAC 78979 |||| || ||| | ||| ||||| || ||||| | ||||| |||| Sbjct 32754 TGCTACGACGTGCCTCTTCGACGGGGTAGTGATTGACTTCGATAATCTTATTCAGATTAC 32695 Query 78980 GCGTGACGACCCGAGTCACCTCGTACAATTTGGCGAAATCAAAAT------GATTTCCTT 79033 |||| |||||| |||| || |||| || || ||| || || | | || | Sbjct 32694 GCGTCACGACCTGAGTGACTTCGTGCAGCTTCTGGAAGTCGAACTCGCCACGCTTGTAGT 32635 Query 79034 TGATGAAAGTCGGTAG-GCACAGCGATGCCAGGTTGCACACGGCCGTCTCGTCCGGGCTA 79092 || ||| | || || ||| || || |||| |||||| || || ||| || || Sbjct 32634 CGACGAACGATGGGAGAGCA-AGAGAAGCCAAGTTGCAAACAGCGACCTCATCAGGCGCG 32576 Query 79093 GAAACCTCGATGATTTCTGTGCACAAATTAGACGACTTGATGGTGCCGATGTTCTTCTGG 79152 | ||||||||| || ||||||| || || |||||| |||| ||||||||| Sbjct 32575 GTGTACTCGATGATCTCAGTGCACAGGTTGGAGCTGCGGATGGTACCGAGATTCTTCTGG 32516 Query 79153 TTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACATGTACGGCGTCCCGGTCTCAACCTGA 79212 |||||||| ||| ||||| |||||||| |||| | || | || ||||| |||| Sbjct 32515 TTGCTCTTGCGGTTGCAGGCATCCTTGTAAAGCATGAAAGGGTTACCAGTCTCCGTCTGA 32456 Query 79213 CTCTTGAGAACGCCGTCCCAGATGTCCCGGGCCCGGACAACCTTCTTGTACCGACCCTGT 79272 || ||| | | | | ||| | | | |||| || || || | || |||| Sbjct 32455 GCCTCGAGGATGGCATACCAAAGCTTCTGGGCACGCACTGTCTCGCGGCCACGGCCCTCC 32396 Query 79273 GCGACGTACGTCCGGTACAACTCGTTGAAAGCCTCCCCATAGACATCGGGCAGGCCCGGG 79332 | || | || | ||| | ||| | || || ||||| || | ||||| || Sbjct 32395 TTCTCATAGCGGTGATAGAGCTCCTCGAACTCATCACCGTAGACGTCCGCGAGGCCGGGA 32336 Query 79333 CACTCGTGCGGGCACATCAGGTGCCAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGG 79392 ||||| ||||||||||| ||| || ||| | || || || ||||||||| Sbjct 32335 GCCTCGTTGGGGCACATCAGCGTCCACTCGCCGTTTTCCTGCACACGCTTCATGAAGAGA 32276 Query 79393 TCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTC 79452 || ||||||||||| || ||||||||||||| ||| | ||| || | ||| |||||| Sbjct 32275 TCGGGGATCCACAGAGCGTAGAAGAGGTCGCGGGCACGAACCTCTTCCTTGCCGTGGTTC 32216 Query 79453 AGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAAC 79512 ||| || || | ||| | | | || |||||||||||||| || ||||||||||| Sbjct 32215 TTACGAAGGTCCAAGAAGCCAAATACATCAGCGTGCCACGGCTCGAGGTAGATGGCGAAA 32156 Query 79513 GAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGG 79572 | ||| |||||| ||| ||||||| |||||| || || ||||||||| | || ||| Sbjct 32155 GCACCTGGACGCTTGTTGCCACCCTGGTCGACGTAGCGAGCAGTGTTGTTGTAGACACGG 32096 Query 79573 AGCATGGGCACGATGCCGTCGGCGACG--CCGTTCGTCCCGTTGATTCGTGTACCGCTCG 79630 |||||||| | || || | ||| | ||||| || || || | ||| | | Sbjct 32095 AGCATGGGAATGAGACCAT--TCGATGTACCGTTTGTGCCACCAATGTAGGAGCCGGTGG 32038 Query 79631 CCCGAATGTTCGAGCA-GTGGATTCCGATGCCCCCGGACCACTTGGAGATGTGCGCGCAC 79689 | |||||| | ||| || || || || || || | ||||||||| || || Sbjct 32037 CACGAATG-CGGTGCACGTTGAGACCAATACCGCCAGCGGTCTTGGAGATCAAAGCACAT 31979 Query 79690 TCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAG 79749 ||| || || |||||||| || || || ||| |||||||| ||| ||||||||| Sbjct 31978 GTCTTAAGTGTATCGTAGATTCCATCAATGCTGTCTTCCTTCATGTCGATGAGGAAGCAG 31919 Query 79750 CTCGACATCTGTGG-GTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAA 79808 ||||||||| || | || ||||| |||||||| || || || | ||||| ||||| Sbjct 31918 GACGACATCTGAGGCGATG-GGGTACCCGCGTTGAAAAGTGTAGGGGAAGCGTGTGTGAA 31860 Query 79809 GAACTTTTGGCTCATCAGATCGTACGTCTCCTTGACGCGCGGGAGGTCGTCGCCGTGGAT 79868 | |||| || ||| ||||| ||||| || | | || || ||||||||||| Sbjct 31859 GTACTTCTGCGACATGTAGTCGTATGTCTCGATGGCCTTCTCGATATCCTCGCCGTGGAT 31800 Query 79869 GCCGACCGCGACGCGCAT 79886 |||||| || |||||||| Sbjct 31799 GCCGACAGCCACGCGCAT 31782 Score = 336 bits (372), Expect = 2e-87 Identities = 1128/1731 (65%), Gaps = 51/1731 (3%) Strand=Plus/Plus Query 19118 ATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGCGAGACATACGAC 19177 ||||| || || ||||||||||| ||||| || || | | | ||||||||||||| Sbjct 31782 ATGCGCGTGGCTGTCGGCATCCACGGCGAGGATATCGAGAAGGCCATCGAGACATACGAC 31841 Query 19178 CTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGAAC 19237 ||| ||||||| |||||| ||||| | || || ||||||||||| ||||| | Sbjct 31842 TACATGTCGCAGAAGTACTTCACACACGCTTCCCCTACACTTTTCAACGCGGGTACCC-C 31900 Query 19238 AAC-CCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCAT 19296 | | || ||||||||| ||| ||||| | | |||||||| ||||||||||| || || Sbjct 31901 ATCGCCTCAGATGTCGTCCTGCTTCCTCATCGACATGAAGGAAGACAGCATTGATGGAAT 31960 Query 19297 CTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATCCA 19356 |||||| || || ||| || || ||||||||| | || ||||| || || | Sbjct 31961 CTACGATACACTTAAGACATGTGCTTTGATCTCCAAGACCGCTGGCGGTATTGGTCTCAA 32020 Query 19357 C-TGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCCGACG 19415 | ||| | || || | | || | || ||| || ||||| | | | | Sbjct 32021 CGTGCACCGC-ATTCGTGCCACCGGCTCCTACATTGGTGGCACAAACGGTACATCGAATG 32079 Query 19416 GTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGGCG 19475 || || | || |||||||| |||| ||||||||| || | |||||| ||||||| ||| Sbjct 32080 GTCTCATTCCCATGCTCCGTGTCTACAACAACACTGCTCGCTACGTCGACCAGGGTGGCA 32139 Query 19476 GCAAACG--CAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGA 19533 ||| || || | ||| |||||||||||||||||||| |||||||| || || | | Sbjct 32140 ACAAGCGTCCAGGTGCT--TTCGCCATCTACCTCGAGCCGTGGCACGCTGATGTATTTGG 32197 Query 19534 TTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCAC 19593 ||| | || || || |||||| || | || ||| | || |||||||||||| Sbjct 32198 CTTCTTGGACCTTCGTAAGAACCACGGCAAGGAAGAGGTTCGTGCCCGCGACCTCTTCTA 32257 Query 19594 GGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACCT 19653 || ||||||| || || || |||||| || || || | ||| || ||| || Sbjct 32258 CGCTCTGTGGATCCCCGATCTCTTCATGAAGCGTGTGCAGGAAAACGGCGAGTGGACGCT 32317 Query 19654 GATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTTCAATGAGTT 19713 ||||||||| |||| || ||||| | ||||||||||| || | |||| | ||| | Sbjct 32318 GATGTGCCCCAACGAGGCTCCCGGCCTCGCGGACGTCTACGGTGATGAGTTCGAGGAGCT 32377 Query 19714 GT---ACCGGACTTACGTAGCCCAGGGCCGGTTCAAGAAGGTGGTCCGGGCCCGGGACGT 19770 | |||| | | | || ||||||| | || || || |||| | | | Sbjct 32378 CTATCACCGCTATGA-GAAG--GAGGGCCGTGGCCGCGAGACAGTGCGTGCCCAGAAGCT 32434 Query 19771 CTGGGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACATGTGCTACAAGGA 19830 ||| | | ||||| | ||| ||||| || | || | |||| |||||||| Sbjct 32435 TTGGTATGCCATCCTCGAGGCTCAGACGGAGACTGGTAACCCTTTCATGCTTTACAAGGA 32494 Query 19831 CGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATCAAGTCGTCCAACCTGTG 19890 ||| ||| |||| || |||||||| |||| | ||| ||||||||||| Sbjct 32495 TGCCTGCAACCGCAAGAGCAACCAGAAGAATCTCGGTACCATCCGCAGCTCCAACCTGTG 32554 Query 19891 TACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAATCTGGCGTCCCT 19950 ||||| ||||| ||| || ||| || ||| || || || || |||| || || Sbjct 32555 CACTGAGATCATCGAGTACACCGCGCCTGATGAGGTCGCTGTTTGCAACTTGGCTTCTCT 32614 Query 19951 GTGC-CTGCCGACTTTCGT------CAAGGCCTCCTCCTTCGACTTTGCCAAATTGTACG 20003 ||| || || | ||||| |||| | |||||||| || || ||| Sbjct 32615 -TGCTCTCCCATCGTTCGTCGACTACAAGCGTGGCGAGTTCGACTTCCAGAAGCTGCACG 32673 Query 20004 AGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGGAACTTTTACCCGA 20063 | || || | |||||| ||||||||||||||| | ||||| || ||||| Sbjct 32674 AAGTCACTCAGGTCGTGACGCGTAATCTGAATAAGATTATCGAAGTCAATCACTACCCCG 32733 Query 20064 CCGAGGCGGCGCGCAAGTCG-AATATGCGCCACCGGCCGATCGCGATCGGCGTCCAGGGC 20122 ||| | ||| || || | || | || ||||| || || | || || || || || Sbjct 32734 TCGAAGAGGCACG-TCGTAGCAACTTCCGTCACCGCCCTATTGGCATGGGTGTGCAAGGT 32792 Query 20123 CTGGCCGACGTTTTCATGATGCTC--GGCCTCTCATTCGACGATCCCAAGGCGCGCGAGC 20180 || ||||| | ||| | ||||| |||| ||||||| || |||| | | Sbjct 32793 CTCGCCGATGCCTTCCT--TGCTCTGCGCCTGCCATTCGAATCACCGGAGGCTAAGAAAC 32850 Query 20181 TCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCCTCCTGGAATCGTGCGAACTCG 20240 |||||| ||||||||| || | ||||| || || ||| || ||||| | | Sbjct 32851 TCAACATTCAGATCTTCGAGACCATCTACCATGCTGCTCTCACCTCTTCCTGCGACATTG 32910 Query 20241 CCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGCCCGCGTCCGAGGGTATCCTCC 20300 | || || |||||| || |||| | | |||| ||||| | || | || ||||||| Sbjct 32911 CAAAGGAACTCGGCCCATATAAGACATACGAGGGCTCGCCTGTTTCTCAAGGCATCCTCC 32970 Query 20301 AGCCGGACATGTGGGGCGTCACTGAGAATGAGTTTTG-----GAGCG-CCCTCAAGGTTG 20354 | || |||||| |||||| | || | || | ||| | || |||| Sbjct 32971 AATATGATATGTGGAACGTCACGCCTACCGACCTCTGGGACTGGGCGTCGCTGAAGGAGA 33030 Query 20355 AGATCAAGACCCACGGGCTTCGCAACTCGTTGCTCGTCGCGCCCATGCCGACCGCCTCGA 20414 |||| || || | |||||||| | ||| | || |||||||| || || || | Sbjct 33031 AGATTGCTCAGCATGGTGTCCGCAACTCCCTCCTCATTGCTCCCATGCCCACTGCGTCCA 33090 Query 20415 CCGCCCAGATCATGGGGAACAACGAGGCTTTCGAGCCGTACACGACCAACATCTACTTGC 20474 || |||||||| | || ||||||||| |||||||||||||| | |||||||||| | Sbjct 33091 CCTCCCAGATCCTTGGCAACAACGAGTGCTTCGAGCCGTACACCTCAAACATCTACTCCC 33150 Query 20475 GTCGTACACTGGCCGGTGAGTTCGTCA--TGGTAAACAAGCACCTGGTCCGCGACTTGCA 20532 |||| || || |||||||| ||| | || ||| ||| || ||| | Sbjct 33151 GTCGAGTCCTCGCTGGTGAGTT--TCAGGTTGTCAACCCATGGCTGCTCAAGGACCTCGT 33208 Query 20533 GAAGATCGATATGTGGTCGCCCAAAATTAAGAATGAAATTGTCCGAGCCGGCGGGAGCGT 20592 | || | ||||||| || || ||||| || || ||| | ||| | | Sbjct 33209 CGACATGGGCTTGTGGTCCGAGAACATGAAGAACCGTATCATC---GCC-GAGGGTGGCT 33264 Query 20593 CCA-GGCATTGGAT-------ATCCCCCAGAACCTCAAGGACATTTACAGGACCGTATGG 20644 | | ||| |||| |||||| || | |||| | | |||| ||| || ||| Sbjct 33265 CTATCGCA-AGGATCCCCAACATCCCCGAGGAGACCAAGACCCTATACAAGACTGTCTGG 33323 Query 20645 GAAATCCCACAGAAGAGCATCATCGACATGGCGGCCGATCGCGGCGCCTACATCGACCAG 20704 || ||| | ||| | || || | ||||| || || || || |||| ||||||||| Sbjct 33324 GAGATCTCTCAGCGAACTATTATTCAGATGGCTGCTGACCGTGGAGCCTTCATCGACCAA 33383 Query 20705 TCCCAGTCGCTCAATGTCTTCATGGAGAATCCGAGCCTGGCGAAGCTGAGCTCCATGCAT 20764 || ||||| || || || |||| || | || | | ||| ||| | | ||||||||| Sbjct 33384 TCTCAGTCTCTAAACATCCACATGAAGGAGCCTACCATGGGCAAGATCACCTCCATGCAC 33443 Query 20765 ATGTACGGCTGGCACAAGGGGCTCAAGACGGGCATGTACTATCTGCGGACC 20815 | ||| ||| | || || ||||||||||||||||| || || ||| Sbjct 33444 TTCGCCGGATGGAAGCTCGGACTAAAGACGGGCATGTACTACCTCCGTACC 33494 Score = 82.4 bits (90), Expect = 8e-11 Identities = 142/205 (69%), Gaps = 6/205 (3%) Strand=Plus/Minus Query 78199 TAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTCGACAGCTTG 78258 ||||||||||||||||| || || |||||||||| | |||||| | | |||| Sbjct 33484 TAGTACATGCCCGTCTTTAGTCCGAGCTTCCATCCGGCGAAGTGCATGGAGGTGATCTTG 33425 Query 78259 GCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATGTACGCACCG 78318 ||| | || | || |||| |||||| || ||||| || ||||||||| | || || Sbjct 33424 CCCATGGTAGGCTCCTTCATGTGGATGTTTAGAGACTGAGATTGGTCGATGAAGGCTCCA 33365 Query 78319 CGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGA---ATCTCCCAGATGGTCCGGTAA 78375 ||||| || ||||| | || | | || || || |||||||||| ||| ||| Sbjct 33364 CGGTCAGCAGCCATCTGAATAATAG---TTCGCTGAGAGATCTCCCAGACAGTCTTGTAT 33308 Query 78376 ATGGCCTTCAGCTCTTCCTGGATGT 78400 | || ||| ||| || |||||| Sbjct 33307 AGGGTCTTGGTCTCCTCGGGGATGT 33283 >seq13 Length=704243 Score = 96.9 bits (106), Expect = 4e-15 Identities = 106/141 (75%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 59973 TTTGCACAACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTC 60032 ||||| | ||||| | || || || ||| || || ||||||||| ||| || ||| Sbjct 439836 TTTGCGAACCGTCTTGTCGCGTTCGCTGCCGTCGAGGGTATCTTCTTCAGTGGTTCCTTC 439895 Query 60033 TGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAG 60092 | || |||||||| || ||||| || |||||||| ||||| | |||||||||||| Sbjct 439896 GCCTCCATCTTCTGGCTGAAGAAGCGCGGTCTCATGCCCGGCCTCACCTTCTCCAACGAG 439955 Query 60093 CTGATTTCCCGGGACGAGGGC 60113 || ||||| || ||||||||| Sbjct 439956 CTCATTTCGCGTGACGAGGGC 439976 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548523058433760