Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013-
04-10] 254 sequences; 35,484,281 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq93 266 4e-66
seq13 89.7 6e-13
>seq93
Length=73557
Score = 266 bits (294), Expect = 4e-66
Identities = 524/757 (69%), Gaps = 16/757 (2%)
Strand=Plus/Plus
Query 53195 ATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGT-GTCCGT-GAGACGTACG 53252
|||||||| || | || |||||||| || || || || | | || | ||||| ||||
Sbjct 31782 ATGCGCGTGGCTGTCGGCATCCACGGCGAGGA-TAT-CGAGAAGGCCATCGAGACATACG 31839
Query 53253 ACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGA 53312
||| ||| || |||||||| || ||||| | || || || |||||||| |||||
Sbjct 31840 ACTACATGTCGCAGAAGTACTTCACACACGCTTCCCCTACACTTTTCAACGCGGGTACCC 31899
Query 53313 -ATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGC 53371
||| || |||||||||| ||||||||| | | |||||||| ||| || || ||
Sbjct 31900 CATCGCC-TCAGATGTCGTCCTGCTTCCTCATCGACATGAAGGAAGACAGCATTGATGGA 31958
Query 53372 ATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATC 53431
|||||||| || || ||| ||||| ||||||||| | || ||||| ||| ||
Sbjct 31959 ATCTACGATACACTTAAGACATGTGCTTTGATCTCCAAGACCGCTGGCGGTATTGGTCTC 32018
Query 53432 CAC-TGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGG--CGTCGCC 53488
|| ||| | | | ||||| | |||| | || || || ||||| | |||
Sbjct 32019 AACGTGCACCG-CATTCGTGCCACCGGCTCCTACATTGGTGGCACAAACGGTACATCGA- 32076
Query 53489 GATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGT 53548
|||| || | || |||||||| |||| ||||||||| || || |||||| ||||||||
Sbjct 32077 -ATGGTCTCATTCCCATGCTCCGTGTCTACAACAACACTGCTCGCTACGTCGACCAGGGT 32135
Query 53549 GGTGGGAAGCG-CAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTAT 53607
|| ||||| | ||| | | ||||||||||||||||||||||||||||| || | |
Sbjct 32136 GGCAACAAGCGTCCAGGTG-CTTTCGCCATCTACCTCGAGCCGTGGCACGCTGATGTATT 32194
Query 53608 GGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTT 53667
| || | || || ||| ||| || || | |||||| | || ||| ||||| ||
Sbjct 32195 TGGCTTCTTGGACCTTCGTAAGAACCACGGCAAGGAAGAGGTTCGTGCCCGCGACCTCTT 32254
Query 53668 -TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGT 53726
||| ||||||||||| || || ||||||||| | ||| || | ||| ||||||
Sbjct 32255 CTAC-GCTCTGTGGATCCCCGATCTCTTCATGAAGCGTGTGCAGGAAAACGGCGAGTGGA 32313
Query 53727 ACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACG 53786
||||||||||| |||||| ||||||||| || ||||||||||| ||||| | |
Sbjct 32314 CGCTGATGTGCCCCAACGAGGCTCCCGGCCTCGCGGACGTCTACGGTGATGAGTTCGAGG 32373
Query 53787 AGATGTATCGGACGTACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAGG 53846
|| | |||| || | ||||||| | ||| || || | ||
Sbjct 32374 AGCTCTATCACCGCTATGAGAAGGAGGGCCGTGGCCGCGAGACAGTGCGTGCCCAGAAGC 32433
Query 53847 TATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGG 53906
| ||| |||| |||||| || ||| |||||| || | || | |||| |||||||
Sbjct 32434 TTTGGTATGCCATCCTCGAGGCTCAGACGGAGACTGGTAACCCTTTCATGCTTTACAAGG 32493
Query 53907 ATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGG 53943
|| | |||| ||||||||||||||||| ||||
Sbjct 32494 ATGCCTGCAACCGCAAGAGCAACCAGAAGAATCTCGG 32530
Score = 134 bits (148), Expect = 2e-26
Identities = 301/446 (67%), Gaps = 7/446 (2%)
Strand=Plus/Plus
Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543
||||||||||| ||| | || || ||||| || ||||| || | |||||| | ||||||
Sbjct 33051 CGCAACTCCCTCCTCATTGCTCCCATGCCCACTGCGTCCACCTCCCAGATCCTTGGCAAC 33110
Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAG 55603
|||||| |||||||||||||| | ||||||||| || || ||| || ||||||
Sbjct 33111 AACGAGTGCTTCGAGCCGTACACCTCAAACATCTACTCCCGTCGAGTCCTCGCTGGTGAG 33170
Query 55604 TTTGTCATGATCAACAAGCACCTCGTCAAGGACCTGCAGAAGATCAACAAGTGGAACCCG 55663
||| | ||||| || |||||||||| | || | |||| | |
Sbjct 33171 TTTCAGGTTGTCAACCCATGGCTGCTCAAGGACCTCGTCGACATGGGCTTGTGGTCCGAG 33230
Query 55664 CAGATCAAGACGGATATTGT-GCGGAACGGGGGGTCCGT--CCAGAATCTGGAGATTCCT 55720
| || |||| ||| | || | | || || || | | || ||| | |||
Sbjct 33231 AACATGAAGAACCGTATCATCGCCG-AGGGTGGCTCTATCGCAAGGATCCCCAACATCCC 33289
Query 55721 C--TGCGTCTCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTG 55778
| | | | |||| | ||| ||| || |||||||| | ||| | | | |||
Sbjct 33290 CGAGGAGAC-CAAGACCCTATACAAGACTGTCTGGGAGATCTCTCAGCGAACTATTATTC 33348
Query 55779 ACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGG 55838
| ||| |||||| ||||| || | ||||||||| || |||||||| |||||| ||||
Sbjct 33349 AGATGGCTGCTGACCGTGGAGCCTTCATCGACCAATCTCAGTCTCTAAACATCCACATGA 33408
Query 55839 AGAATCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCA 55898
|| | ||| | ||| |||| | | ||| |||||||| ||| |||||| ||||| |
Sbjct 33409 AGGAGCCTACCATGGGCAAGATCACCTCCATGCACTTCGCCGGATGGAAGCTCGGACTAA 33468
Query 55899 AGACGGGTATGTACTATCTGCGGACC 55924
||||||| |||||||| || || |||
Sbjct 33469 AGACGGGCATGTACTACCTCCGTACC 33494
>seq13
Length=704243
Score = 89.7 bits (98), Expect = 6e-13
Identities = 86/109 (79%), Gaps = 1/109 (1%)
Strand=Plus/Minus
Query 74805 AGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAG 74864
||||| ||||| || || |||||||||| ||| ||||||| ||||||||||||||||
Sbjct 439939 AGGCCGGGCATGAGACCGCGCTTCTTCAGCCAGAAGATGGAGGCGAAGGAACCACTGAAG 439880
Query 74865 AAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTG 74913
||||| || ||||| || || |||||||| || | ||| || ||||
Sbjct 439879 AAGATACCCTCGACGGCAGCGAACGCGACAAGACGGTTCGC-AAAGGTG 439832
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547214262589200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |