Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013-
04-10] 254 sequences; 35,484,281 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq93 192 7e-44
seq5 181 1e-40
seq9 122 1e-22
seq44 118 1e-21
>seq93
Length=73557
Score = 192 bits (212), Expect = 7e-44
Identities = 616/948 (65%), Gaps = 22/948 (2%)
Strand=Plus/Minus
Query 80821 TTCAGGTTGCGTGTAACAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAATTGGTTC 80880
||||| || || || || ||| | || || || || || ||||| |||||||| | |
Sbjct 32704 TTCAGATTACGCGTCACGACCTGAGTGACTTCGTGCAGCTTCTGGAAGTCGAACTCGCCA 32645
Query 80881 CCCTTC------ACAAATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCT 80934
| ||| || || | || || || || |||| ||||| || || |||||
Sbjct 32644 CGCTTGTAGTCGACGAACGATGGGAGAGCAAGAGAAGCCAAGTTGCAAACAGCGACCTCA 32585
Query 80935 TCAGCATCTGTAAACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGG 80994
|||| | || |||||| ||| || ||||||| || || || ||||| ||
Sbjct 32584 TCAGGCGCGGTGTACTCGATGATCTCAGTGCACAGGTTGGAGCTGCGGATGGTACCGAGA 32525
Query 80995 TTTTTCTGGTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTC 81054
|| |||||||| |||| |||||| || |||||||| |||| | ||| |||| |||
Sbjct 32524 TTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAAAGCATGAAAGGGTTACCAGTC 32465
Query 81055 TCGACCTGTGACTTGAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAAT 81114
|| ||| | || ||||||||| | ||||| || | || || || ||||
Sbjct 32464 TCCGTCTGAGCCTCGAGGATGGCATACCAAAGCTTCTGGGCACGCACTGTCTCGCGGCCA 32405
Query 81115 TTGCCTTCGGCCACATACTTGGCGTA-AGCTTCGTCGAACTTGGCACCGTGAAGTTCAGT 81173
||| || | |||| | || |||| | ||||||| |||||| | || |
Sbjct 32404 CGGCCCTCCTTCTCATAGCGGTGATAGAGCTCC-TCGAACTCATCACCGTAGACGTCCGC 32346
Query 81174 GAGGTCTGGGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTT 81233
|||| | || |||||| ||||||||||| ||| ||| || | || ||| |||
Sbjct 32345 GAGGCCGGGAGCCTCGTTGGGGCACATCAGCGTCCACTCGCCGTTTTCCTGCACACGCTT 32286
Query 81234 CATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTCATC 81293
|||||| || |||||||| || ||| ||| ||||||||| || |||| || |
Sbjct 32285 CATGAAGAGATCGGGGATCCACAGAGCGTAGAAGAGGTCGCGGGCACGAACCTCTTCCTT 32226
Query 81294 ACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATA 81353
|| ||||| || | || | ||| | | | || || ||||| ||||| || ||
Sbjct 32225 GCCGTGGTTCTTACGAAGGTCCAAGAAGCCAAATACATCAGCGTGCCACGGCTCGAGGTA 32166
Query 81354 CACGGCGATCGACCCCTTGCGACG------GCCACCCTGGTTGACGTAACGGGCAGTCGC 81407
| ||||| | | ||| |||| ||||||||||| |||||| || |||||
Sbjct 32165 GATGGCGAAAG-CACCT--GGACGCTTGTTGCCACCCTGGTCGACGTAGCGAGCAGTGTT 32109
Query 81408 GTTAAATACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACG 81467
||| | ||||| | ||| || |||| ||||| || |||||| || || | ||
Sbjct 32108 GTTGTAGACACGGAGCATGGGAATGAGACCATTCGATGTACCGTTTGTGCCACCAATGTA 32049
Query 81468 CGACCCCTTGGCGCGCA--CCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAA 81525
|| || |||| || | | ||| ||| ||||| || || || | ||| ||
Sbjct 32048 GGAGCCGGTGGCACGAATGCGGTGCACGTTG--AGACCAATACCGCCAGCGGTCTTGGAG 31991
Query 81526 ATCTGAGCACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCA 81585
||| |||||| || | || || || ||||| || ||||| |||| ||||||||
Sbjct 31990 ATCAAAGCACATGTCTTAAGTGTATCGTAGATTCCATCAATGCTGTCTTCCTTCATGTCG 31931
Query 81586 AGCAAGAAACAGCTTGACATCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTC 81645
| | ||| ||| ||||||||||| | | || || ||||| ||||| ||||
Sbjct 31930 ATGAGGAAGCAGGACGACATCTGAGGCGATGGGGTACCCGCGTTGAAAAGTGTAGGGGAA 31871
Query 81646 GCGTGAATGAAATAACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCG 81705
||||| |||| || | ||||| ||| || || || || | |||||
Sbjct 31870 GCGTGTGTGAAGTACTTCTGCGACATGTAGTCGTATGTCTCGATGGCCTTCTCGATATCC 31811
Query 81706 TCACCGTGAATACCGATAGCTACACGCATAAACATGTACTG-GGGCGT 81752
|| ||||| || |||| ||| || ||||| | ||||| || ||||||
Sbjct 31810 TCGCCGTGGATGCCGACAGCCACGCGCATCAGCATGTGTTGTGGGCGT 31763
Score = 95.1 bits (104), Expect = 1e-14
Identities = 112/152 (74%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 80038 GTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAA 80097
|| || || ||||||||||||||||| || || |||||| ||| | |||||| ||
Sbjct 33493 GTACGGAGGTAGTACATGCCCGTCTTTAGTCCGAGCTTCCATCCGGCGAAGTGCATGGAG 33434
Query 80098 CTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGATG 80157
||| ||| | | || || | || |||| |||||| ||||||||||| || ||||
Sbjct 33433 GTGATCTTGCCCATGGTAGGCTCCTTCATGTGGATGTTTAGAGACTGAGATTGGTCGATG 33374
Query 80158 AAAGCCCCACGATCTGCCGCCATTTCAATAAT 80189
|| || ||||| || || ||||| | ||||||
Sbjct 33373 AAGGCTCCACGGTCAGCAGCCATCTGAATAAT 33342
>seq5
Length=873697
Score = 181 bits (200), Expect = 1e-40
Identities = 162/203 (80%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489
|||||||| ||||| || |||||||| ||||| |||| ||||| ||| | ||| |
Sbjct 39324 ACCGGCAAAACTATCACGCTTGAGGTCGAGTCGTCCGATACCATTGACAATGTTAAGTCG 39265
Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549
|| ||||||||||||||||| ||||| ||||| |||||||| | || || || || |||
Sbjct 39264 AAGATTCAGGACAAGGAGGGCATTCCGCCAGATCAGCAGCGCTTGATCTTCGCCGGCAAG 39205
Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609
|| |||||||||| ||||||||| | ||||| ||| |||| ||||| || ||||| |||
Sbjct 39204 CAGCTCGAGGATGGCCGTACCCTATCCGACTACAATATCCAGAAGGAGTCTACTCTGCAT 39145
Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632
|| ||||| || || ||||||||
Sbjct 39144 CTCGTCTTACGCCTGCGCGGTGG 39122
Score = 158 bits (174), Expect = 1e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || |||||||| | || |||||||| ||||| || ||||| ||||||
Sbjct 39120 ATGCAGATTTTCGTCAAGACATTGACTGGCAAGACCATTACGCTCGAGGTGGAGTCATCG 39061
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||| | || | ||| | || |||||||| |||||||| || |||||||| |||
Sbjct 39060 GATACCATCGACAACGTCAAGTCGAAGATTCAGGATAAGGAGGGTATCCCTCCAGATCAG 39001
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| ||||| ||||| ||||| ||||| | || |||| ||||| || | ||||| |||
Sbjct 39000 CAACGTCTCATTTTCGCTGGCAAGCAGTTAGAAGATGGGCGTACTCTCTCGGACTACAAT 38941
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| || ||||||||||| || || | || | ||||| || |||||
Sbjct 38940 ATTCAGAAGGAATCCACGCTCCACTTGGTGCTCCGTCTCCGTGGTGG 38894
Score = 136 bits (150), Expect = 5e-27
Identities = 168/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| || ||||| || ||||||||||| || || | |||||||| || |
Sbjct 38892 ATGCAGATCTTCGTGAAGACTCTCACCGGCAAGACCATCACCTTGGAGGTTGAATCGAGC 38833
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||| | || | || | || || || ||||||||||| ||||| || ||||||
Sbjct 38832 GATACCATCGATAACGTCAAATCGAAGATCCAAGACAAGGAGGGCATTCCACCTGACCAG 38773
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || || |||||||| || || || || | | | || || | ||||| ||
Sbjct 38772 CAGCGTCTTATCTTCGCTGGTAAACAGCTGGAAGACGGTAGGACGCTCTCTGACTACAAC 38713
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635
| || ||||| || || || || | || | |||||||| || |||||
Sbjct 38712 ATTCAGAAGGAGTCTACGCTGCACTTGGTGCTTCGTCTTCGTGGCGGACA 38663
Score = 127 bits (140), Expect = 2e-24
Identities = 150/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489
||||| |||||||| || || ||||| ||||| || | || | || | |||
Sbjct 39608 ACCGGTAAGACTATCACCCTCGAGGTGGAGTCGTCAGACACGATCGACAACGTAAAGAGC 39549
Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549
|| || ||||||||||| || ||||| || || |||||||| | || || || || |||
Sbjct 39548 AAGATCCAGGACAAGGAAGGCATTCCCCCCGATCAGCAGCGCTTGATCTTCGCCGGCAAG 39489
Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609
|| |||||||||| |||||| | | || || || |||| ||||| || |||||||||
Sbjct 39488 CAGCTCGAGGATGGCCGTACCTTGTCCGATTACAACATCCAGAAGGAGTCGACTCTTCAT 39429
Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632
|| ||| | || |||||||||||
Sbjct 39428 CTTGTCCTCCGCCTTCGCGGTGG 39406
>seq9
Length=754770
Score = 122 bits (134), Expect = 1e-22
Identities = 120/155 (77%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 27478 AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATT 27537
||| | ||| | || || |||||||||||||| ||||| || ||||||||||| || |||
Sbjct 276301 AATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCCTGATT 276242
Query 27538 TTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAA 27597
|| || || ||||| |||||||| | || ||||| | ||||| || |||| ||||||
Sbjct 276241 TTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAA 276182
Query 27598 TCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|| || ||||| | ||| | ||||| || |||||
Sbjct 276181 TCGACGCTTCACTTGGTCCTCCGTCTCCGTGGTGG 276147
>seq44
Length=299893
Score = 118 bits (130), Expect = 1e-21
Identities = 112/143 (78%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 27491 AAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGC 27550
||||| ||||||||||| ||||| || |||||||||||||| || || || || ||||
Sbjct 197931 AAATTGTAGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTTATCTTCGCCGGCAAGC 197990
Query 27551 AACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATC 27610
| |||||||||| ||| ||||| | ||||| || |||| ||||| || || |||||
Sbjct 197991 AGCTCGAGGATGGTCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGACCCTTCACT 198050
Query 27611 TAGTCTTGCGTCTTCGCGGTGGA 27633
| ||| | ||||| || ||||||
Sbjct 198051 TGGTCCTCCGTCTGCGTGGTGGA 198073
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570308589264480
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