Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013- 04-10] 254 sequences; 35,484,281 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq38 86.0 5e-12 >seq38 Length=367138 Score = 86.0 bits (94), Expect = 5e-12 Identities = 183/269 (68%), Gaps = 6/269 (2%) Strand=Plus/Plus Query 30191 TGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGT-GTACTCTGCTCCGAAATG 30249 |||||||| ||| ||| | ||| ||| || | || || | ||| || || ||||| || Sbjct 34388 TGATCCACTCCCTGCCCAGTGTAATCTTCCTTG-TGCCCTTTGTATTCCGCGCCGAAGTG 34446 Query 30250 CCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCT 30309 || ||| ||||| ||||| || || || || || || | || |||| ||| || Sbjct 34447 CCGCCATTGGAATCCGTATACTGGGCCGAGTTCGCCTGCCTCGTAGTGCCCGAGTCCTAC 34506 Query 30310 CTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCAGAGAG 30369 |||| | | |||| || |||||| ||||||||||||||| ||| || ||||| Sbjct 34507 GCTGTCTAGGTACTCTCGCGAGCCGTTGCCGTCCCAGATCTTTATCCCAGCGTCGGAGAG 34566 Query 30370 CTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCA 30429 | | || ||| || || || |||||| |||| ||| | | ||||| || Sbjct 34567 AGACTGGCTGTGTGTTGAGCCCGCGATGAACCATAGCAACTCTCCGATTACGGC--TCGT 34624 Query 30430 A--AAGACCCTCTTGGTCGTGAGGAGGGG 30456 | || ||||| || || ||||||||||| Sbjct 34625 AGGAATACCCTTTTTGTTGTGAGGAGGGG 34653 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406309142215368