Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013-
04-10] 254 sequences; 35,484,281 total letters
Query= NC_028461.1
Length=127011
Score E
Sequences producing significant alignments: (Bits) Value
seq38 86.0 5e-12
>seq38
Length=367138
Score = 86.0 bits (94), Expect = 5e-12
Identities = 183/269 (68%), Gaps = 6/269 (2%)
Strand=Plus/Plus
Query 30191 TGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGT-GTACTCTGCTCCGAAATG 30249
|||||||| ||| ||| | ||| ||| || | || || | ||| || || ||||| ||
Sbjct 34388 TGATCCACTCCCTGCCCAGTGTAATCTTCCTTG-TGCCCTTTGTATTCCGCGCCGAAGTG 34446
Query 30250 CCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCT 30309
|| ||| ||||| ||||| || || || || || || | || |||| ||| ||
Sbjct 34447 CCGCCATTGGAATCCGTATACTGGGCCGAGTTCGCCTGCCTCGTAGTGCCCGAGTCCTAC 34506
Query 30310 CTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCAGAGAG 30369
|||| | | |||| || |||||| ||||||||||||||| ||| || |||||
Sbjct 34507 GCTGTCTAGGTACTCTCGCGAGCCGTTGCCGTCCCAGATCTTTATCCCAGCGTCGGAGAG 34566
Query 30370 CTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCA 30429
| | || ||| || || || |||||| |||| ||| | | ||||| ||
Sbjct 34567 AGACTGGCTGTGTGTTGAGCCCGCGATGAACCATAGCAACTCTCCGATTACGGC--TCGT 34624
Query 30430 A--AAGACCCTCTTGGTCGTGAGGAGGGG 30456
| || ||||| || || |||||||||||
Sbjct 34625 AGGAATACCCTTTTTGTTGTGAGGAGGGG 34653
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406309142215368
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |