Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013-
04-10] 254 sequences; 35,484,281 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq5 100 2e-16
>seq5
Length=873697
Score = 100 bits (110), Expect = 2e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134
|||||| || ||||| ||| || || || || || || | || || | |||| ||
Sbjct 38683 CACCAAGTGCAGCGTAGACTCCTTCTGAATGTTGTAGTCAGAGAGCGTCCTACCGTCTTC 38742
Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194
|||||||| || || || ||||||||||||||||| | || | || ||| |||||
Sbjct 38743 CAGCTGTTTACCAGCGAAGATAAGACGCTGCTGGTCAGGTGGAATGCCCTCCTTGTCTTG 38802
Query 39195 GATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254
||| ||| ||||| | | | ||||||||||| || || |||| ||||| | ||
Sbjct 38803 GATCTTCGATTTGACGTTATCGATGGTATCGCTCGATTCAACCTCCAAGGTGATGGTCTT 38862
Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
|| || || || || || ||||| |||||
Sbjct 38863 GCCGGTGAGAGTCTTCACGAAGATCTGCAT 38892
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429544270287902
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |