Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013- 04-10] 254 sequences; 35,484,281 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq38 82.4 6e-11 >seq38 Length=367138 Score = 82.4 bits (90), Expect = 6e-11 Identities = 177/260 (68%), Gaps = 5/260 (2%) Strand=Plus/Plus Query 29554 GAAATCCTCTGCCTTAAAGTCGTCCAGGCT--CTCCACCCTCC-TGTTTATCCTCAGTGT 29610 ||||||||| ||||| | | || | || | ||| |||| | || ||| ||| || Sbjct 33940 GAAATCCTCCGCCTTCCATCCATCGATACTTCCCCCAATCTCCCTCTTGATCTTCAATGC 33999 Query 29611 GGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAATCCTCAGCGGTTCCACGTGGTCAAGGTA 29670 ||||| || || |||||||| ||||| | |||||| ||||| ||||| || || Sbjct 34000 AGGAAAATCCCTCGGTTCCCTCTCCAGCTGCACTTTCAGCGCATCCACATGGTCTAGATA 34059 Query 29671 GACGTGAGCATCTCCCAGGGTGTGGACAAACTCTCCCGGT-TCTAGCCCGGTGACGTGAG 29729 ||| || ||||| |||| || || ||| ||||| || || | | ||||| | Sbjct 34060 GACATGTGCATCCCCCATCGTATGCGTGAACGTCCCCGGCGTCAAGTC-GCACACGTGTG 34118 Query 29730 CCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGT 29789 ||| ||||| ||| | | | || ||||||||||| ||||| || || ||||| | Sbjct 34119 CCAGCATGTGCGTCAACAATGCATACGACGCGATGTTAAACGGCACACCAAGGCCCATAT 34178 Query 29790 CCCCTGACCTCTGGTAGAGC 29809 | | |||| ||| || ||| Sbjct 34179 CGCACGACCGCTGATACAGC 34198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406161942671044