Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013-
04-10] 254 sequences; 35,484,281 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq38 82.4 6e-11
>seq38
Length=367138
Score = 82.4 bits (90), Expect = 6e-11
Identities = 177/260 (68%), Gaps = 5/260 (2%)
Strand=Plus/Plus
Query 29554 GAAATCCTCTGCCTTAAAGTCGTCCAGGCT--CTCCACCCTCC-TGTTTATCCTCAGTGT 29610
||||||||| ||||| | | || | || | ||| |||| | || ||| ||| ||
Sbjct 33940 GAAATCCTCCGCCTTCCATCCATCGATACTTCCCCCAATCTCCCTCTTGATCTTCAATGC 33999
Query 29611 GGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAATCCTCAGCGGTTCCACGTGGTCAAGGTA 29670
||||| || || |||||||| ||||| | |||||| ||||| ||||| || ||
Sbjct 34000 AGGAAAATCCCTCGGTTCCCTCTCCAGCTGCACTTTCAGCGCATCCACATGGTCTAGATA 34059
Query 29671 GACGTGAGCATCTCCCAGGGTGTGGACAAACTCTCCCGGT-TCTAGCCCGGTGACGTGAG 29729
||| || ||||| |||| || || ||| ||||| || || | | ||||| |
Sbjct 34060 GACATGTGCATCCCCCATCGTATGCGTGAACGTCCCCGGCGTCAAGTC-GCACACGTGTG 34118
Query 29730 CCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGT 29789
||| ||||| ||| | | | || ||||||||||| ||||| || || ||||| |
Sbjct 34119 CCAGCATGTGCGTCAACAATGCATACGACGCGATGTTAAACGGCACACCAAGGCCCATAT 34178
Query 29790 CCCCTGACCTCTGGTAGAGC 29809
| | |||| ||| || |||
Sbjct 34179 CGCACGACCGCTGATACAGC 34198
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406161942671044
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |