Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013- 04-10] 254 sequences; 35,484,281 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq38 95.1 9e-15 >seq38 Length=367138 Score = 95.1 bits (104), Expect = 9e-15 Identities = 185/269 (69%), Gaps = 6/269 (2%) Strand=Plus/Plus Query 27457 TGATCCACCCCCATCCCCGAGTAGTCTACCCTCATGTCCGT-GTACTCTGCTCCGAAATG 27515 |||||||| ||| ||| | ||| ||| || | || || | ||| || || ||||| || Sbjct 34388 TGATCCACTCCCTGCCCAGTGTAATCTTCCTTG-TGCCCTTTGTATTCCGCGCCGAAGTG 34446 Query 27516 CCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCT 27575 || ||||||||| ||||| || || || || || || | || |||| ||| || Sbjct 34447 CCGCCATTGGAATCCGTATACTGGGCCGAGTTCGCCTGCCTCGTAGTGCCCGAGTCCTAC 34506 Query 27576 CTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAG 27635 |||| | | |||| || |||||| ||||||||||||||| ||| |||||||| Sbjct 34507 GCTGTCTAGGTACTCTCGCGAGCCGTTGCCGTCCCAGATCTTTATCCCAGCGTCGGAGAG 34566 Query 27636 CTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCA 27695 | | || ||| || || || |||||| |||| ||| | | ||||| || Sbjct 34567 AGACTGGCTGTGTGTTGAGCCCGCGATGAACCATAGCAACTCTCCGATTACGGC--TCGT 34624 Query 27696 A--AAGACCCTCTTGGTCGTGAGGAGGGG 27722 | || ||||| || || ||||||||||| Sbjct 34625 AGGAATACCCTTTTTGTTGTGAGGAGGGG 34653 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369506056144274