Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013-
04-10] 254 sequences; 35,484,281 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq5 104 5e-17
seq44 84.2 5e-11
>seq5
Length=873697
Score = 104 bits (114), Expect = 5e-17
Identities = 151/211 (72%), Gaps = 7/211 (3%)
Strand=Plus/Plus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || || |||||||| || || |||||||| || | | || || || ||||| |
Sbjct 38686 CAAG-TGCAGCGTAGACTCCTTCTGAATGTTGTAGTCAGAGAGCGTCCTACCGTCTTCCA 38744
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| ||| || ||||||||||| | ||||||||| | | || || ||||| ||||| |
Sbjct 38745 GCTGTTTACCAGCGAAGATAAGACGCTGCTGGTCAGGTGGAATGCCCTCCTTGTCTTGGA 38804
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTC---TCTACTTCAAGAGTAATAGTTT 152073
| || |||||| | || | | | || ||| || || || | || || || |
Sbjct 38805 TCTTCGATTTGACGTTATCGATGGTATC---GCTCGATTCAACCTCCAAGGTGATGGTCT 38861
Query 152074 TGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|||| ||||||||||||||||||| ||||||
Sbjct 38862 TGCCGGTGAGAGTCTTCACGAAGATCTGCAT 38892
Score = 102 bits (112), Expect = 2e-16
Identities = 137/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
|||||||||||||||||| ||||| || |||||||||||||||| || || | |||||
Sbjct 39420 GAGGACAAGATGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGACAAGGTACGGCCATC 39479
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
|| || || ||||||||||| | | |||||| || | | || |||||||| ||
Sbjct 39480 CTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGATCGGGGGGAATGCCTTCCTTGTC 39539
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071
|| || || || || | || | ||||||| ||| || || || || |||||
Sbjct 39540 CTGGATCTTGCTCTTTACGTTGTCGATCGTGTCTGACGACTCCACCTCGAGGGTGATAGT 39599
Query 152072 TTTGCCCGTGA 152082
|| || ||||
Sbjct 39600 CTTACCGGTGA 39610
Score = 96.9 bits (106), Expect = 8e-15
Identities = 133/186 (72%), Gaps = 0/186 (0%)
Strand=Plus/Plus
Query 151895 GACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTC 151954
||| ||||| ||||||||||| || ||||| ||||| |||| || || | ||||| ||
Sbjct 39139 GACGAGATGCAGAGTAGACTCCTTCTGGATATTGTAGTCGGATAGGGTACGGCCATCCTC 39198
Query 151955 TAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014
|| || ||||||||||| | | |||||| || | || || || ||||| || ||
Sbjct 39199 GAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGATCTGGCGGAATGCCCTCCTTGTCCTG 39258
Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074
||| || || ||| | || | | | || || ||| || ||||| || ||||||||
Sbjct 39259 AATCTTCGACTTAACATTGTCAATGGTATCGGACGACTCGACCTCAAGCGTGATAGTTTT 39318
Query 152075 GCCCGT 152080
||| ||
Sbjct 39319 GCCGGT 39324
>seq44
Length=299893
Score = 84.2 bits (92), Expect = 5e-11
Identities = 97/131 (74%), Gaps = 0/131 (0%)
Strand=Plus/Minus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
|||||| | ||||| || ||||| || ||||||||||| |||| | || | |||||
Sbjct 198058 GAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATC 197999
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
|| || || |||||||||||||| | ||||||||||| | || || ||||| ||
Sbjct 197998 CTCGAGCTGCTTGCCGGCGAAGATAAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTC 197939
Query 152012 TTGAATTTTTT 152022
| ||||| ||
Sbjct 197938 TACAATTTATT 197928
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153817045034434
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |