Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013-
04-10] 254 sequences; 35,484,281 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq5 149 1e-30
seq9 107 4e-18
seq13 96.9 7e-15
seq44 95.1 3e-14
>seq5
Length=873697
Score = 149 bits (164), Expect = 1e-30
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
|| ||||| || ||||| |||| || | ||| || || || |||||||||||||
Sbjct 38666 CCGCCACGAAGACGAAGCACCAAGTGCAGCGTAGACTCCTTCTGAATGTTGTAGTCAGAG 38725
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
||||| | || || || || ||||| || || ||||| | ||| || |||||| |||
Sbjct 38726 AGCGTCCTACCGTCTTCCAGCTGTTTACCAGCGAAGATAAGACGCTGCTGGTCAGGTGGA 38785
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| |||||||||||||||||||| | ||| ||| ||||||| || || | ||| ||
Sbjct 38786 ATGCCCTCCTTGTCTTGGATCTTCGATTTGACGTTATCGATGGTATCGCTCGATTCAACC 38845
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| | ||||| ||||| || || | |||||| ||||| ||||||||
Sbjct 38846 TCCAAGGTGATGGTCTTGCCGGTGAGAGTCTTCACGAAGATCTGCAT 38892
Score = 136 bits (150), Expect = 8e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || || || |||| || | |||| ||| || || || |||||||| |
Sbjct 38893 ACCACCACGGAGACGGAGCACCAAGTGGAGCGTGGATTCCTTCTGAATATTGTAGTCCGA 38952
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || || ||||| |||| || || || || || || | |||||| || || ||
Sbjct 38953 GAGAGTACGCCCATCTTCTAACTGCTTGCCAGCGAAAATGAGACGTTGCTGATCTGGAGG 39012
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||||||||||| || || ||||| | || ||| | ||||| || ||||| | || ||
Sbjct 39013 GATACCCTCCTTATCCTGAATCTTCGACTTGACGTTGTCGATGGTATCCGATGACTCCAC 39072
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||||| || || ||||| || ||||| ||||| ||||| ||||||||
Sbjct 39073 CTCGAGCGTAATGGTCTTGCCAGTCAATGTCTTGACGAAAATCTGCAT 39120
Score = 136 bits (150), Expect = 8e-27
Identities = 157/206 (76%), Gaps = 4/206 (2%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG- 282930
|||||| || ||||| || || ||||| | || || || ||||||||||| || |
Sbjct 39405 ACCACCGCGAAGGCGGAGGACAAGATGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGA 39464
Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990
|||| || ||||||||||| || || || ||||| |||||||| || || || || |
Sbjct 39465 CAAG-GTACGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGATCGGGGG 39523
Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCG 283049
|||| || |||||||| |||||| ||||| |||||| | ||||| ||||| || | ||
Sbjct 39524 GAATGCCTTCCTTGTCCTGGATC-TTGCTCTTTACGTTGTCGATCGTGTCTGACGACTCC 39582
Query 283050 ACTTCGAGAGTGATCGTCTTACCCGT 283075
|| ||||| ||||| |||||||| ||
Sbjct 39583 ACCTCGAGGGTGATAGTCTTACCGGT 39608
Score = 120 bits (132), Expect = 6e-22
Identities = 150/206 (73%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| |||||||| | || ||||| | || || || ||||| |||||||| |
Sbjct 39121 ACCACCGCGCAGGCGTAAGACGAGATGCAGAGTAGACTCCTTCTGGATATTGTAGTCGGA 39180
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || ||||||||||| || || || ||||| |||||||| || || || || |||
Sbjct 39181 TAGGGTACGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGATCTGGCGG 39240
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| ||||||||||| || ||||| | || || | || || || || || | |||||
Sbjct 39241 AATGCCCTCCTTGTCCTGAATCTTCGACTTAACATTGTCAATGGTATCGGACGACTCGAC 39300
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCA 283077
|| || ||||| || || || ||||
Sbjct 39301 CTCAAGCGTGATAGTTTTGCCGGTCA 39326
>seq9
Length=754770
Score = 107 bits (118), Expect = 4e-18
Identities = 110/144 (76%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || || || |||| || | ||| ||| || |||||||||||||| |
Sbjct 276146 ACCACCACGGAGACGGAGGACCAAGTGAAGCGTCGATTCCTTCTGGATGTTGTAGTCGGA 276205
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| |||||||| ||||| || || || ||||| || |||| || || ||||| ||
Sbjct 276206 GAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCCGGGGG 276265
Query 282992 AATACCCTCCTTGTCTTGGATCTT 283015
||| ||||||||||| ||||||||
Sbjct 276266 AATGCCCTCCTTGTCCTGGATCTT 276289
Score = 89.7 bits (98), Expect = 1e-12
Identities = 122/168 (73%), Gaps = 2/168 (1%)
Strand=Plus/Minus
Query 315667 ACCCCACCTCCGAAATTCTTAAGCGCCTCTGCCATGGCACCGAGACTCTCGCGGTCCACA 315726
|| ||||| ||||| |||| | |||| || || |||||||||| || ||||| |
Sbjct 292485 ACACCACCCTCGAAAGTCTTGATGGCCTTTGACAGGGCACCGAGAGAATCACGGTCGAGG 292426
Query 315727 AAGTTGGTCGGCTCATCAAGAACGATGACGTGGGGTTGTTGCCATAGAGC-GGCGCCGAT 315785
||||||| ||||| ||||||||||| | ||||| | |||||| |||| ||| ||
Sbjct 292425 TAGTTGGTGGGCTCGTCAAGAACGATCAAATGGGGACGCTGCCAT-GAGCAAGCGGAGAG 292367
Query 315786 AACGAGCTTTAGTTTTTGCCCACCAGACAGTCCACGGATGCGAGAATG 315833
|||| ||| | || ||||| ||||| ||||| ||||| || ||
Sbjct 292366 GACGACCTTGACACGCTGACCACCGGACAGACCACGCATGCGGGAGTG 292319
>seq13
Length=704243
Score = 96.9 bits (106), Expect = 7e-15
Identities = 170/248 (69%), Gaps = 0/248 (0%)
Strand=Plus/Plus
Query 230163 ATCGTCACAGAAGTAGTTGCAAATGAAAAGGAGTTCATTTGCGACGCTATTCCTTGCCGT 230222
||| |||| |||| || ||| || |||| ||| | || ||| | |||||| |
Sbjct 440049 ATCATCACTGAAGCTGTCACAATCGAGCAGGAATTCCTGACTGAGGCTCTGCCTTGCGCT 440108
Query 230223 CTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATT 230282
|| |||||||||| ||| |||||| | ||||| || || ||||| || || ||| |
Sbjct 440109 CTGCTCGGCATGAACGCTACCCTCATGTGCCAATACATTGAGTTCGTTGCCGACCGTCTG 440168
Query 230283 TTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAG 230342
|| |||| || || || || ||||| || ||| |||||||||| || ||||||
Sbjct 440169 CTCTTGGCTCTCGGTAACACCAAGGTGTACAATGCCACCAACCCCTTCGACTTCATGGAG 440228
Query 230343 CTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTATCAAAGG 230402
|| || | || || || ||||||||||| ||||| || |||| || || | |
Sbjct 440229 AATATCTCCTTGGCTGGCAAGACCAACTTCTTCGAGAAGCGCGTTGGCGACTACCAGAAG 440288
Query 230403 CCCGGTGT 230410
| |||||
Sbjct 440289 GCTGGTGT 440296
>seq44
Length=299893
Score = 95.1 bits (104), Expect = 3e-14
Identities = 102/135 (76%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
||||||||||| || || |||| || | || || || |||||||||||||| |
Sbjct 198072 CCACCACGCAGACGGAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAG 198013
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| ||||| |||||||| || || || ||||| ||||| | ||| || ||||| |||
Sbjct 198012 AGGGTGCGACCATCCTCGAGCTGCTTGCCGGCGAAGATAAGACGCTGCTGGTCCGGGGGA 197953
Query 282993 ATACCCTCCTTGTCT 283007
|| ||||||||||||
Sbjct 197952 ATGCCCTCCTTGTCT 197938
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046735793518116
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |