Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013-
04-10] 254 sequences; 35,484,281 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq5 113 3e-20
seq9 82.4 5e-11
>seq5
Length=873697
Score = 113 bits (124), Expect = 3e-20
Identities = 153/211 (73%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||||| ||| ||||| |||||| || |||||||| || | ||| | |||| ||
Sbjct 38683 CACCAAGTGCAGCGTAGACTCCTTCTGAATGTTGTAGTCAGAGAGCGTCCTACCGTCTTC 38742
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|||||| || || || ||||| | ||||||||| || | || | || ||||| ||
Sbjct 38743 CAGCTGTTTACCAGCGAAGATAAGACGCTGCTGGTCAGGTGGAATGCCCTCCTTGTCTTG 38802
Query 44248 TATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
|||||| | || | ||| | ||||| ||| ||||| ||||||| || || ||||
Sbjct 38803 GATCTTC-GATTTGACGTTATCGATGGTATCGCTCGATTCAACCTCCAAGGTGATGGTCT 38861
Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| || ||||| |||||||||||||| |||||
Sbjct 38862 TGCCGGTGAGAGTCTTCACGAAGATCTGCAT 38892
Score = 98.7 bits (108), Expect = 7e-16
Identities = 136/188 (72%), Gaps = 2/188 (1%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGTC 44187
|| || ||||| || |||||| |||||||||||||||| | || | || | || ||
Sbjct 39424 ACAAGATGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGACAAGGT-ACGGCCATCCTC 39482
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|||||||| ||||| |||||||| ||||||||||| | || | |||||||| |||
Sbjct 39483 GAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGATCGGGGGGAATGCCTTCCTTGTCCTG 39542
Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| ||| | | | || ||||| | || |||||||| | || || |||||
Sbjct 39543 GATCTTGCTCTTTACGTTGTCGATCGTGTCTGACGACTCCACCTCGAGGGTGATAGTCTT 39602
Query 44308 TCCCGTGA 44315
|| ||||
Sbjct 39603 ACCGGTGA 39610
Score = 93.3 bits (102), Expect = 3e-14
Identities = 147/209 (70%), Gaps = 4/209 (2%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || | ||| | || || || || || || |||||| ||||| ||||| ||
Sbjct 39118 CATACCACCGCGCAGGCGTAAGACGAGATGCAGAGTAGACTCCTTCTGGATATTGTAGTC 39177
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| || || | || || |||||||| ||||| |||||||| |||||||||||||
Sbjct 39178 GGATAGGGTACGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGATCTGG 39237
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGAT 44284
|| | || ||||| ||| |||||| ||| || ||| | ||||| |||| ||
Sbjct 39238 CGGAATGCCCTCCTTGTCCTGAATCTTCGACTTAACATTGT--CAATGGTATCGGACGAC 39295
Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGT 44313
|| ||||| | ||| || || || || ||
Sbjct 39296 TCGACCTCAAGCGTGATAGTTTTGCCGGT 39324
>seq9
Length=754770
Score = 82.4 bits (90), Expect = 5e-11
Identities = 93/125 (74%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||| ||||||||| ||||| ||||||||||| |||| ||| ||| |||| ||
Sbjct 276165 ACCAAGTGAAGCGTCGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCG 276224
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| ||||| || |||| |||||||| || | || | || ||||| |||
Sbjct 276225 AGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGG 276284
Query 44249 ATCTT 44253
|||||
Sbjct 276285 ATCTT 276289
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359989285604718
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |