Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20antarcticum_20[genbank_20GCA_5F002077065.1_20201
7-04-03] 267 sequences; 47,410,550 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq1 145 8e-30
seq112 122 9e-23
>seq1
Length=1805414
Score = 145 bits (160), Expect = 8e-30
Identities = 555/853 (65%), Gaps = 19/853 (2%)
Strand=Plus/Minus
Query 16676 TGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCC 16735
||||| || | ||||| || ||||| ||||| || ||||| | || || || ||||||
Sbjct 290227 TGGTAGTCACCTACGCGCTTCTCGAAGAAGTTCGTCTTGCCGGCGAGGGAGATGTTCTCC 290168
Query 16736 ATGAAATCAAAAGGATTAGTAGC-TGAAAATATTTTAGAGTACCCCAGTTCGGCGATTAA 16794
||||| || || || || || || | | || || || || ||| || || ||
Sbjct 290167 ATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTGCT-GTGGCCGAGTGCGAGGAGTAG 290109
Query 16795 TCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGA-C 16853
| || || || || || || || |||||||| | | | |||||| || | ||| |
Sbjct 290108 GCGGTCAGCGACGAACTCGATGTACTGGCACATGAGCTTGGCGTTCATGCCGAGAAGTGC 290049
Query 16854 GTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATAC 16913
| | || || || || | | || |||||| || | || |||||| | || || |
Sbjct 290048 GCAG-GGTAGGGCGTCTGAAAGGAACTCTTGCTCGATCTCGACAGCTTCCGTGATGAT-C 289991
Query 16914 TAGCA-ACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAA 16972
| | || | || || || | | |||||| || || ||| |||||
Sbjct 289990 TGGTGGACAAGGTCGAGTGATGGCTTGTTGCGGAGATGTGCGTGCAGCATACAGGCGAAG 289931
Query 16973 TCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATC 17032
||| || | |||||||| | | || || ||||| || || || | |||||||||
Sbjct 289930 TCGGTGTGCATGCCCTCGTCACGGGAAATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATC 289871
Query 17033 TTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCG 17092
|| || ||||| | ||| || || ||||||||||| ||||| ||||| || ||||||
Sbjct 289870 AGCCCGCGCTTCTTGAGCCAGAAGATAGCGGCGAACGAACCAGAGAAGAAAATGCCCTCG 289811
Query 17093 ACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTC 17152
|| | ||| || ||||| | || | || | |||| | | || | ||||| ||
Sbjct 289810 ACAGCTGCGAAGGCGATGAGACGGCAGCCGAAGGTCGATGCGTCGTCGCTGATCCACTTT 289751
Query 17153 TGCACCCACTCGGCTTT-TTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAATT- 17210
| |||| | ||| || |||| ||||| || | || || || ||||| | |
Sbjct 289750 AGTGCCCAGTTGGCCTTCTTGCGG-ATGCACGGGATATTGTCGATAGCGTTAAAGAGGTA 289692
Query 17211 TCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGT 17270
| | || | | | ||| | || || || ||||| ||||| ||| | |||||||
Sbjct 289691 TGTGCGTTGGC-GAGGTTCGCTGATGTAGGTGTCGATAAGTAGTGAGTAGGTCTCGGAGT 289633
Query 17271 GTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTT 17330
| || |||||||| ||||| || ||||| ||||| || || || | ||||| || |
Sbjct 289632 GGATATTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGAGCCTCAGGGATTTGCACCT 289573
Query 17331 C--CACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAA 17388
| ||| || ||||| || | || || ||||| ||||||||||| |||||||| ||
Sbjct 289572 CGCCAC-TA-AATCGCTCGACCAGGTTCTCGTTGACGATGCCGTCTGATGCGGCGAAGAA 289515
Query 17389 CGCCAATATATGCTTAATGAAATATTTTTCGTCCGGTGTAAGAACGC----GCCAGTCCT 17444
|| | | ||| |||||| || ||||| | || |||| |||||| |
Sbjct 289514 GGCAAGCACATGTGAAATGAAGAATCGCTCGTCATCATTGAG-ACGCTTGTTCCAGTCGT 289456
Query 17445 TTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTAT 17504
| |||||| || | ||| | || || | ||||| || ||| ||||||| || |
Sbjct 289455 GCAGATCTTTCGACAGATCAATCTCCTCTGCTGTCCAGAATGATGCCTCTGCCTTCTTGT 289396
Query 17505 ACATATTCCAAAT 17517
|||| | ||| ||
Sbjct 289395 ACATCTGCCATAT 289383
>seq112
Length=1778705
Score = 122 bits (134), Expect = 9e-23
Identities = 550/855 (64%), Gaps = 19/855 (2%)
Strand=Plus/Minus
Query 16674 TTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCT 16733
||||||| || | ||||| || ||||| ||||| || ||||| | || || || ||||
Sbjct 1417154 TTTGGTAGTCACCTACGCGCTTCTCGAAGAAGTTTGTCTTGCCGGCGAGGGAGATGTTCT 1417095
Query 16734 CCATGAAATCAAAAGGATTAGTAGC-TGAAAATATTTTAGAGTACCCCAGTTCGGCGATT 16792
||||||| || || || || || || | | || || || || ||| || || |
Sbjct 1417094 CCATGAAGTCGAAGGGGTTGGTGGCATTGTAGTACTTGCT-GTGGCCGAGTGCGAGGAGT 1417036
Query 16793 AATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGA 16852
| | || || ||||| || || || |||||||| | | | |||||| || | |||
Sbjct 1417035 AGACGGTCAGCGACAAACTCGATGTACTGGCACATGAGCTTGGCGTTCATGCCGAGAAGT 1416976
Query 16853 -CGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAAT 16911
|| | || || || |||| | || |||||| || | || || || | || ||
Sbjct 1416975 GCGCAG-GGCAGGGCGTCCGATAGGAACTCTTGCTCGATCTCGACGGCCTCGGTGATGAT 1416917
Query 16912 ACTAGCA-ACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGA 16970
|| | || | || || || | | |||||| || || || || |
Sbjct 1416916 -CTGGTGGACGAGGTCGAGTGATGGCTTGTTGCGGAGATGTGCGTGCAGCATGCAGGCAA 1416858
Query 16971 AATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCA 17030
| ||| || | |||||||| | ||| || || ||||| || || | |||||||
Sbjct 1416857 AGTCGGTGTGCATGCCCTCGTCACGCGAGATGAGCTCATTAGAGAACGTGAGGCCGGGCA 1416798
Query 17031 TCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCT 17090
| || || ||||| | ||| || || || ||||| || || || ||||| |||||||
Sbjct 1416797 TGAGGCCGCGCTTCTTGAGCCAGAAGATGGCAGCGAAGGAGCCGGAGAAGAAGATACCCT 1416738
Query 17091 CGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATT 17150
| || | ||| || ||||| | || | || | |||| | | || | ||||| |
Sbjct 1416737 CAACAGCTGCGAAGGCGATAAGACGGCAGCCGAAGGTCGATGCGTCGTCGCTGATCCACT 1416678
Query 17151 TCTGCACCCACTCGGCTTT-TTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAAT 17209
| | |||| | || || |||| ||||| || | || || || || || |
Sbjct 1416677 TTAGTGCCCAGTTAGCCTTCTTGCGG-ATGCAGGGGATGTTGTCGATAGCGTTGAAGAGG 1416619
Query 17210 T-TCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGA 17268
| | | || | | | ||| | || || || ||||||||||| ||| | |||||
Sbjct 1416618 TATGTGCGTTGGC-GAGGTTCGCTGATGTAGGTGTCGATGAGTAGTGAGTAGGTCTCGGA 1416560
Query 17269 GTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAAC 17328
||| ||||||||||| ||||| || ||||| ||||| || || || | |||||| ||
Sbjct 1416559 GTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGAGCCTCGGGTATTTGCAC 1416500
Query 17329 TTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAA 17388
|| | |||||| || | || || ||||| || |||||||| |||||||| ||
Sbjct 1416499 CTCGCCACTGAATCGCTCGACCAGGTTCTCGTTGACAATGCCGTCTGATGCGGCGAAGAA 1416440
Query 17389 CGCCAATATATGCTTAATGAAATATTTTTCGTC--CGGTGTAAGAACGC----GCCAGTC 17442
|| | | |||| |||||| || ||||| || || || |||| ||||||
Sbjct 1416439 GGCAAGGACATGCGAAATGAAGAATCGCTCGTCATCGTTG--AG-ACGCTTGTTCCAGTC 1416383
Query 17443 CTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTT 17502
| | || || || | ||| | || || | ||||| || ||| ||||||| ||
Sbjct 1416382 GTGCAGGTCCTTCGACAGATCGATCTCCTCTGCTGTCCAGAACGATGCCTCTGCCTTCTT 1416323
Query 17503 ATACATATTCCAAAT 17517
||||| | ||| ||
Sbjct 1416322 GTACATTTGCCATAT 1416308
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517543872691560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |