Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rachicladosporium_20antarcticum_20[genbank_20GCA_5F002077065.1_20201 7-04-03] 267 sequences; 47,410,550 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq198 131 4e-25 >seq198 Length=398492 Score = 131 bits (144), Expect = 4e-25 Identities = 436/669 (65%), Gaps = 17/669 (3%) Strand=Plus/Plus Query 248833 TTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAATT 248892 ||||| ||||||||| || ||||| ||| ||||| || ||| | | ||| | Sbjct 354242 TTCAAGACGCTGGAGCGCTCATATCTGCTCCGCATTGACGGGAAGGTGGCGGAGAGGCCA 354301 Query 248893 CAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAGCGTGCTC 248952 ||||||||| | ||||| || ||||| || || ||| || ||||| || | | || Sbjct 354302 CAGCACATGATCATGCGTGTCGCTGTAGGTATACACGGCGAGGACATTGATGCGGCGATC 354361 Query 248953 GAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACACCGACGCTCTTCAAC 249012 |||||||||| | ||| | | | |||||||| | |||||||| |||| | Sbjct 354362 GAGACGTACAACTACATGTCCAACAAGTATTTCACACATGCTTCGCCGACGCTGTTCAGC 354421 Query 249013 GCCGGTAC-CGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAGACGACTC 249071 || || || | |||| | || || || ||||| || | | |||| | |||||| Sbjct 354422 GCTGGCACACCTCAAGCA-CAACTTGCTTCATGCTTCCTGATCGACATGAAGGACGACAG 354480 Query 249072 TGTCGACGGCATTTATGACACGCTTAAACAGAC---GGCGAAGATTTCTAAATTCGCGGG 249128 | || |||||||| |||||||| | |||| |||| ||| || ||| ||| || Sbjct 354481 CATTGAGGGCATTTACGACACGCTGA---AGACTTGTGCGATGATCTCGAAAAACGCCGG 354537 Query 249129 CGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTACATCAAAGGTACAAA 249188 || ||||| ||| || ||| || |||| || |||||||| |||||||| Sbjct 354538 TGGCATCGGACTCAACGCACATCGCATTCGGGCGACTGGCTCGTACATTGCGGGTACAAA 354597 Query 249189 TGG--GGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGTCCACCGCCAGGTTC 249246 ||| ||| | ||| |||||||| | || || || | ||| || |||| Sbjct 354598 TGGCACATCA--AACGGTCTCGTACCCATGCTACGGGTGTTCAACAACACTGCTAGGTAT 354655 Query 249247 ATCAACCAGGCCGGGCGC---CGAAAGGGGTCGTTCGCCATGTATTTGGAAGTGTGGCAC 249303 || |||||| || | ||| || | |||||||| || | || ||||||| Sbjct 354656 GTCGACCAGGGTGGCAACAAGCGACCCGGCGCATTCGCCATCTACCTCGAGCCGTGGCAC 354715 Query 249304 GCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGAGCTCATGAGAGCG 249363 || || || ||| ||||| ||| || |||||| ||||||| ||| | | || Sbjct 354716 GCAGACATCTTGTCCTTCCTTGACCTGCGCAAGAACCACGGCAAGGAGGAGGTCCGCGCT 354775 Query 249364 CGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCGCCGCGTCAAGGCCGAC 249423 |||||| | ||||||| |||||| || | || | |||||| || || | | || Sbjct 354776 CGTGACTTGTTCTACGCTCTGTGGATCCCTGATCTCTTCATGAAGCGTGTGCAAGATAAC 354835 Query 249424 GGCGATTGGACGCTTCTTTCTCCGTCCGA-CGCCCCGGACCTCATCGATCTACACGGCGC 249482 | |||||||| || | | ||| ||| ||||||| ||| |||| | |||| | Sbjct 354836 GCTGATTGGACACTGATGTGCCCGAACGAGTGCCCCGG-CCTTGCCGATGTGTACGGGGA 354894 Query 249483 CGACTTCGA 249491 || ||||| Sbjct 354895 TGAGTTCGA 354903 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073762726712256