Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20antarcticum_20[genbank_20GCA_5F002077065.1_20201
7-04-03] 267 sequences; 47,410,550 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq198 131 4e-25
>seq198
Length=398492
Score = 131 bits (144), Expect = 4e-25
Identities = 436/669 (65%), Gaps = 17/669 (3%)
Strand=Plus/Plus
Query 248833 TTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAATT 248892
||||| ||||||||| || ||||| ||| ||||| || ||| | | ||| |
Sbjct 354242 TTCAAGACGCTGGAGCGCTCATATCTGCTCCGCATTGACGGGAAGGTGGCGGAGAGGCCA 354301
Query 248893 CAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAGCGTGCTC 248952
||||||||| | ||||| || ||||| || || ||| || ||||| || | | ||
Sbjct 354302 CAGCACATGATCATGCGTGTCGCTGTAGGTATACACGGCGAGGACATTGATGCGGCGATC 354361
Query 248953 GAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACACCGACGCTCTTCAAC 249012
|||||||||| | ||| | | | |||||||| | |||||||| |||| |
Sbjct 354362 GAGACGTACAACTACATGTCCAACAAGTATTTCACACATGCTTCGCCGACGCTGTTCAGC 354421
Query 249013 GCCGGTAC-CGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAGACGACTC 249071
|| || || | |||| | || || || ||||| || | | |||| | ||||||
Sbjct 354422 GCTGGCACACCTCAAGCA-CAACTTGCTTCATGCTTCCTGATCGACATGAAGGACGACAG 354480
Query 249072 TGTCGACGGCATTTATGACACGCTTAAACAGAC---GGCGAAGATTTCTAAATTCGCGGG 249128
| || |||||||| |||||||| | |||| |||| ||| || ||| ||| ||
Sbjct 354481 CATTGAGGGCATTTACGACACGCTGA---AGACTTGTGCGATGATCTCGAAAAACGCCGG 354537
Query 249129 CGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTACATCAAAGGTACAAA 249188
|| ||||| ||| || ||| || |||| || |||||||| ||||||||
Sbjct 354538 TGGCATCGGACTCAACGCACATCGCATTCGGGCGACTGGCTCGTACATTGCGGGTACAAA 354597
Query 249189 TGG--GGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGTCCACCGCCAGGTTC 249246
||| ||| | ||| |||||||| | || || || | ||| || ||||
Sbjct 354598 TGGCACATCA--AACGGTCTCGTACCCATGCTACGGGTGTTCAACAACACTGCTAGGTAT 354655
Query 249247 ATCAACCAGGCCGGGCGC---CGAAAGGGGTCGTTCGCCATGTATTTGGAAGTGTGGCAC 249303
|| |||||| || | ||| || | |||||||| || | || |||||||
Sbjct 354656 GTCGACCAGGGTGGCAACAAGCGACCCGGCGCATTCGCCATCTACCTCGAGCCGTGGCAC 354715
Query 249304 GCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGAGCTCATGAGAGCG 249363
|| || || ||| ||||| ||| || |||||| ||||||| ||| | | ||
Sbjct 354716 GCAGACATCTTGTCCTTCCTTGACCTGCGCAAGAACCACGGCAAGGAGGAGGTCCGCGCT 354775
Query 249364 CGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCGCCGCGTCAAGGCCGAC 249423
|||||| | ||||||| |||||| || | || | |||||| || || | | ||
Sbjct 354776 CGTGACTTGTTCTACGCTCTGTGGATCCCTGATCTCTTCATGAAGCGTGTGCAAGATAAC 354835
Query 249424 GGCGATTGGACGCTTCTTTCTCCGTCCGA-CGCCCCGGACCTCATCGATCTACACGGCGC 249482
| |||||||| || | | ||| ||| ||||||| ||| |||| | |||| |
Sbjct 354836 GCTGATTGGACACTGATGTGCCCGAACGAGTGCCCCGG-CCTTGCCGATGTGTACGGGGA 354894
Query 249483 CGACTTCGA 249491
|| |||||
Sbjct 354895 TGAGTTCGA 354903
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073762726712256
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |