Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20antarcticum_20[genbank_20GCA_5F002077065.1_20201
7-04-03] 267 sequences; 47,410,550 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq198 141 1e-28
>seq198
Length=398492
Score = 141 bits (156), Expect = 1e-28
Identities = 424/645 (66%), Gaps = 12/645 (2%)
Strand=Plus/Minus
Query 63161 TTCTCTTTCGTATAGAGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCT 63220
||| |||||||| | || || | ||||||||| || || | |||| | | | |
Sbjct 354931 TTCGCTTTCGTACCGTGTGTAGAGCGCTTCGAACTCATCCCCGTACACATCGGCAAGGCC 354872
Query 63221 AGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAA 63280
|| || || | ||| ||||||| | ||| || ||| ||| | ||| || ||||| ||
Sbjct 354871 GGGGCACTCGTTCGGGCACATCAGTGTCCAATCAGCGTTATCTTGCACACGCTTCATGAA 354812
Query 63281 GAGATCAGGAATCCAAAGAGC-TATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTG 63339
||||||||| ||||| ||||| || || || || | | | ||||| || ||
Sbjct 354811 GAGATCAGGGATCCACAGAGCGTAGAACAAG-TCACGAGCGCGGACCTCCTCCTTGCCGT 354753
Query 63340 TATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGG 63399
||||| || || ||||| | || || || | |||||||| || | ||| ||||
Sbjct 354752 GGTTCTTGCGCAGGTCAAGGAAGGACAAGATGTCTGCGTGCCACGGCTCGAGGTAGATGG 354693
Query 63400 CCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAA 63459
| | | || || || ||||| || ||||| || | || ||||| ||||| || | |
Sbjct 354692 CGAATGCGCCGGGTCGCTTGTTGCCACCCTGGTCGACATACCTAGCAGTGTTGTTGAACA 354633
Query 63460 CTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCAC 63519
| | | ||| || | | |||||||||| | ||||| ||||| | || || |||
Sbjct 354632 CCCGTAGCATGGGTACGAGACCGTTTGATGTGCCATTTGTACCCGCAATGTACGAGCCAG 354573
Query 63520 TGGCACGAAT---AT-TACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAAT 63575
| || ||||| || | | ||| || || || || || || |||| ||||| |
Sbjct 354572 TCGCCCGAATGCGATGTGC--GTTG--AGTCCGATGCCACCGGCGTTTTTCGAGATCATC 354517
Query 63576 GCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGA 63635
|| || || | |||||| || ||||| || ||||| || || |||||| | ||
Sbjct 354516 GCACAAGTCTTCAGCGTGTCGTAAATGCCCTCAATGCTGTCGTCCTTCATGTCGATCAGG 354457
Query 63636 AAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGC 63695
|| || || | ||| ||| || || || | || | || || ||||| ||
Sbjct 354456 AAGCATGAAGCAAGTTGTGCTTGAGGTGTGCCAGCGCTGAACAGCGTCGGCGAAGCATGT 354397
Query 63696 GTAAACCATTTTTCAGA-AAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTG 63754
|| || | || | || | |||| ||||||||||| || || | || || |||
Sbjct 354396 GTGAAATACTTGTTGGACATGTAG-TTGTACGTCTCGATCGCCGCATCAATGTCCTCGCC 354338
Query 63755 ATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTC 63799
|| || ||||| ||||||||||| | ||||||||| || || ||
Sbjct 354337 GTGTATACCTACAGCGACACGCATGATCATGTGCTGTGGCCTCTC 354293
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629815497983760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |