Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rachicladosporium_20antarcticum_20[genbank_20GCA_5F002077065.1_20201 7-04-03] 267 sequences; 47,410,550 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq198 134 2e-26 >seq198 Length=398492 Score = 134 bits (148), Expect = 2e-26 Identities = 420/644 (65%), Gaps = 10/644 (2%) Strand=Plus/Minus Query 65954 TTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCC 66013 ||| |||||||| |||| || | ||||||||| || || | |||| | | | || Sbjct 354931 TTCGCTTTCGTACCGTGTGTAGAGCGCTTCGAACTCATCCCCGTACACATCGGCAAGGCC 354872 Query 66014 AGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAA 66073 || || || | ||| ||||||| | ||| || ||| ||| | ||| || ||||| || Sbjct 354871 GGGGCACTCGTTCGGGCACATCAGTGTCCAATCAGCGTTATCTTGCACACGCTTCATGAA 354812 Query 66074 GAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGT 66133 ||||||||| ||||| ||||| || || || | | | ||||| || || Sbjct 354811 GAGATCAGGGATCCACAGAGCGTAGAACAAGTCACGAGCGCGGACCTCCTCCTTGCCGTG 354752 Query 66134 ATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGC 66193 ||||| || || ||||| | || || || |||||||| || | ||| ||||| Sbjct 354751 GTTCTTGCGCAGGTCAAGGAAGGACAAGATGTCTGCGTGCCACGGCTCGAGGTAGATGGC 354692 Query 66194 CATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAAC 66253 | | || || || ||||| || ||||| || | || ||||| ||||| || | || Sbjct 354691 GAATGCGCCGGGTCGCTTGTTGCCACCCTGGTCGACATACCTAGCAGTGTTGTTGAACAC 354632 Query 66254 TCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACT 66313 | | ||| || | | ||| || ||||| ||||| || || | || || ||| | Sbjct 354631 CCGTAGCATGGGTACGAGACCGTTTGATGTGCCATTTGTACCCGCAATGTACGAGCCAGT 354572 Query 66314 TGCACGAAT---AT-TACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 66369 || ||||| || | | ||| || || || || || || |||| ||||| | | Sbjct 354571 CGCCCGAATGCGATGTGC--GTTG--AGTCCGATGCCACCGGCGTTTTTCGAGATCATCG 354516 Query 66370 CGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAA 66429 | || || | ||| || || |||||||| || || || ||| |||||| | || | Sbjct 354515 CACAAGTCTTCAGCGTGTCGTAAATGCCCTCAATGCTGTCGTCCTTCATGTCGATCAGGA 354456 Query 66430 AACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCG 66489 | || || | ||| || || || || | || | || || ||||| || | Sbjct 354455 AGCATGAAGCAAGTTGTGCTTGAGGTGTGCCAGCGCTGAACAGCGTCGGCGAAGCATGTG 354396 Query 66490 TAAACCATTTTTCAGA-AAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGA 66548 | || | || | || | |||| ||||||||||| || || | || || ||| Sbjct 354395 TGAAATACTTGTTGGACATGTAG-TTGTACGTCTCGATCGCCGCATCAATGTCCTCGCCG 354337 Query 66549 TGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTC 66592 || || ||||| ||||||||||| | ||||||||| || || || Sbjct 354336 TGTATACCTACAGCGACACGCATGATCATGTGCTGTGGCCTCTC 354293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658170603348280