Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rachicladosporium_20antarcticum_20[genbank_20GCA_5F002077065.1_20201 7-04-03] 267 sequences; 47,410,550 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq176 150 3e-31 seq198 147 3e-30 >seq176 Length=738521 Score = 150 bits (166), Expect = 3e-31 Identities = 1131/1797 (63%), Gaps = 62/1797 (3%) Strand=Plus/Minus Query 78718 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 78777 ||||| || ||||| || || || | | ||||| || |||||||| || || || || Sbjct 360038 GTGAACTGGATGGGCGCCGAGGCAGCCATGGTACGGAGGTAGTACATGCCAGTCTTCAGT 359979 Query 78778 CCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 78837 ||||||| ||| ||| ||| ||||| ||| | ||| | | || || || Sbjct 359978 CCGAGACGCCAGCCGGTGAAGTGCATCGACGTGATCTTGCCCATAGTTGGCTCCTTCATG 359919 Query 78838 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 78897 ||||| || | || || |||||||||||||| || | ||||| | ||| | ||| Sbjct 359918 TGGATGTTGAGTGACTGGGACTGATCGATGAAGGCGCCACGATCTGCTGACATCTGGATG 359859 Query 78898 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAA-CTCGCTTAATATCTTCTGGAAG 78956 || | || || ||||| | ||| || || | ||| ||| || || || |||| Sbjct 359858 ATGTTGCGCTGGCTGATCTCCCAGACAGTCTTGTACAGCTC-CTTGATTTCATCGGGAAT 359800 Query 78957 GTTTGTATT---CTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATT 79013 ||| | | | |||||| || ||||||||||| || || | ||||| || | ||| | Sbjct 359799 GTTGGGAATGCGCTGAATTGAACCACCATCTGCAATGATGCGGTTCTTCATGTTGTCACT 359740 Query 79014 CCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCC 79073 ||| | | ||| | | |||| || ||||| || ||||| || ||||| Sbjct 359739 CCAAAGACCCATGTCGACGAGGTCCTTAAGCAGCCAAGGATTGACGACTTGGAACTCTCC 359680 Query 79074 AGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCC 79133 | ||| || | |||| ||| ||||| ||||| || || || | | || || || Sbjct 359679 GGCCAAGACACGACGAGAGTAGATATTGCTGGTGTACGGCTCAAAGCACTCGTTGAAGCC 359620 Query 79134 CAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 79193 || || || | || || ||||||||||| || || | ||| || | || ||| Sbjct 359619 CATGATCTGCGATGTGCTCGCTGTTGGCATAGGAGCAACGAGTAAGGAGTTGCGAACACC 359560 Query 79194 GTATGATCTG--ATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAACA 79251 | || ||| ||| | || || | |||||| ||||| | |||| || ||| Sbjct 359559 G--TGCACTGCAATTCGCGCCTTGAGGGCTTCCCAGTCCCACAAGTCAGTGGGTGTCACA 359502 Query 79252 TTCCAAAGATCATATTGTAGAATACCGT-TACTAGCGTATGATCCTGTGTATGTTTCATA 79310 ||| | || ||||| || || | | | | | || || | ||| || || || Sbjct 359501 CCCCACATGTCGTATTGGAGCTCGCCCTGTGAGATGGGA-GAGCCAGGGTAGGTCTCGTA 359443 Query 79311 AGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTC 79370 || || ||| || || | |||||| || | ||| ||| || ||||| || Sbjct 359442 GGGACCGAGCTTCTCAGCAAGGTCACAAGATGCAGTAAGTGCGGCGTGGTACATGGTCTC 359383 Query 79371 GAAAATCTTCTTATTGAGATCTTGTGCTTC--TAGGCTATCAAATGGATAATTTAAGAG- 79427 ||| |||| || ||||||| | ||||| ||| | || ||||| | |||| Sbjct 359382 GAAGATCTGCTGATTGAGAAGACGAGCTTCCTTAGAC--TCGAATGG-CATGCGCAGAGC 359326 Query 79428 AATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGA 79487 | ||| ||||| || | || ||||||| ||| || || || |||| | | || | Sbjct 359325 GAGAAAGGCGTCAGCCAGACCGCTGACACCAAGACCAATTGGCCTGTGTCGCATGTT-GC 359267 Query 79488 AATTTC-AGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCC--- 79543 || | |||||| | || || | || | || || || || || || || | Sbjct 359266 TGTTGCGAGCTTCAATCACCGGGTACTTGTTGACTTCGATGATCTTGTTCAGGTTGCGAG 359207 Query 79544 TGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCGTC--CATCT--AT- 79598 |||| | | ||||| || | || || || || || ||| | ||| || Sbjct 359206 TGACGACCTGTGTGACC---TCGTGGAGCTTCTTGAAGTCGTAT-GTCTGCTTCTGAATA 359151 Query 79599 TACAAACATGTT--CAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCC 79656 | | | ||||| | || | ||||| ||||| || || || || |||| | | Sbjct 359150 TCGACATATGTTGGGAGTGCCAACGATGCAAGATTGCATACAGCCACTTCATCTGGGGCG 359091 Query 79657 GCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGA 79716 | || | || || || ||||| || || | |||||| || || |||| || Sbjct 359090 GTGTACTCGATGATCTCGGTGCACAGATTGGAGCTGCGAATGGTGCCCAAGTTTTTCTGG 359031 Query 79717 TTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGA 79776 || ||||| ||| || || ||||| || ||| |||| | ||||| || ||||| Sbjct 359030 TTGCTCTTGCGGTTGGCGGCGTCTTTATACAGCATGTACGGGTTGCCAGTCTCGGTCTGA 358971 Query 79777 GATTCTATAATCGCTTTCCAGA----CGACTCGAGCCTTTATTATAGACTTGTATCTCTT 79832 | || | ||| || | ||||| | || || |||| | | | ||| Sbjct 358970 GCCTCAAGAATGGCATACCAGATTTTCTGGGCGCGC-------ATAG---TCTCACCCTT 358921 Query 79833 ---TTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAA 79889 ||| || |||||| | || || | ||| || |||||||| |||| ||| | | Sbjct 358920 GCCTTCGCTCTCGTATCGAGTGTAGAGCGCTTCAAATTCGTCTCCGTAAACGTCGGCAAG 358861 Query 79890 TCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCAT 79949 || ||||| |||| || |||||||| | ||| || | | || | || |||||||| Sbjct 358860 ACCGGGACACTCGTTCGGGCACATCAATGTCCAATCAGCGTTGTCTTGCACACGTTTCAT 358801 Query 79950 AAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCC 80009 |||||||| |||||||| || || || || || | | | | |||||| || || Sbjct 358800 GAAGAGATCGGGAATCCACAGTGCGTAGAACAGGTCACGAGCGCGAACCTCCTCCTTGCC 358741 Query 80010 TGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATAT 80069 ||||| || |||||||||| || || || | ||||| || || | ||| || Sbjct 358740 GTGGTTCTTACGGAGGTCGAGGAACGACAAGATGTCTGCGTGCCATGGCTCAAGGTAGAT 358681 Query 80070 GGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATA 80129 ||| | | || || || ||||| || ||||| || | |||||||| ||||| || | Sbjct 358680 GGCAAACGCGCCGGGACGCTTGTTGCCGCCCTGGTCGACATATCTAGCCGTGTTGTTGAA 358621 Query 80130 AACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCC 80189 || | | ||| || | | ||| || ||||| || || || || | || || ||| Sbjct 358620 CACCCGTAGCATGGGTACGAGACCGTTCGATGTGCCGTTTGTACCCGCAATGTACGATCC 358561 Query 80190 ACTGGCACGAAT---AT-TACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTA 80245 | | || ||||| || | | ||| || || || || || || |||| ||||| | Sbjct 358560 AGTCGCCCGAATGCGATGTGC--GTTG--AGTCCGATGCCACCGGCGTTTTTCGAGATCA 358505 Query 80246 ATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTA 80305 || || || | || || ||||| ||||| || ||||| || |||||| | | Sbjct 358504 TCGCACAAGTCTTCAGTGTGTCGTAGATACCCTCAATACTATCGTCCTTCATGTCGATCA 358445 Query 80306 GAAAACAGCTAGACATTTGGTG-ACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCG 80364 || || || || ||| | || || || | || | || || ||||| Sbjct 358444 AGAAGCA-TGAGGCAAGCTGTGCTTGTGGTGTGCCAGCGCTGAACAGCGTTGGCGAAGCA 358386 Query 80365 TGCGTAAACCATTTTTCAGACA-GTAGATTGTACGTCTCAATAGCTGATTCTATATCCCA 80423 || || || | || | |||| |||| |||||||||||||| || | || || || Sbjct 358385 TGTGTGAAGTACTTGTTGGACATGTAG-TTGTACGTCTCAATCGCCGCATCGATGTCTTC 358327 Query 80424 TTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTT 80480 ||| || || || || |||||||| | ||||||||| || || || ||| ||| Sbjct 358326 GCCATGTATACCCACTGCCACACGCATGATCATGTGCTGTGGCCTCTCCGCGACCTT 358270 >seq198 Length=398492 Score = 147 bits (162), Expect = 3e-30 Identities = 425/645 (66%), Gaps = 12/645 (2%) Strand=Plus/Minus Query 79833 TTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCC 79892 ||| |||||||| |||| || | ||||||||| || || | |||||| | | || Sbjct 354931 TTCGCTTTCGTACCGTGTGTAGAGCGCTTCGAACTCATCCCCGTACACATCGGCAAGGCC 354872 Query 79893 AGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAA 79952 || || |||| || ||||||| | ||| || | | ||| | || || ||||| || Sbjct 354871 GGGGCACTCGTTCGGGCACATCAGTGTCCAATCAGCGTTATCTTGCACACGCTTCATGAA 354812 Query 79953 GAGATCAGGAATCCAAAGAGC-TATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTG 80011 ||||||||| ||||| ||||| || || || || | | | |||||| || || Sbjct 354811 GAGATCAGGGATCCACAGAGCGTAGAACAAG-TCACGAGCGCGGACCTCCTCCTTGCCGT 354753 Query 80012 TATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGG 80071 ||||| || || ||||| | || || || | |||||||| || | ||| |||| Sbjct 354752 GGTTCTTGCGCAGGTCAAGGAAGGACAAGATGTCTGCGTGCCACGGCTCGAGGTAGATGG 354693 Query 80072 CCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAA 80131 | | | || ||||| ||||| || ||||| || | || ||||| ||||| || | | Sbjct 354692 CGAATGCGCCGGGTCGCTTGTTGCCACCCTGGTCGACATACCTAGCAGTGTTGTTGAACA 354633 Query 80132 CTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCAC 80191 | | | ||| || | | ||| || ||||| ||||| || || | || || ||| Sbjct 354632 CCCGTAGCATGGGTACGAGACCGTTTGATGTGCCATTTGTACCCGCAATGTACGAGCCAG 354573 Query 80192 TGGCACGAAT---AT-TACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAAT 80247 | || ||||| || | | ||| || || || || || || |||| ||||| | Sbjct 354572 TCGCCCGAATGCGATGTGC--GTTG--AGTCCGATGCCACCGGCGTTTTTCGAGATCATC 354517 Query 80248 GCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGA 80307 || || || | ||| || || |||||||| ||||| || || |||||| | || Sbjct 354516 GCACAAGTCTTCAGCGTGTCGTAAATGCCCTCAATGCTGTCGTCCTTCATGTCGATCAGG 354457 Query 80308 AAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGC 80367 || || || | ||| || || || || | || | || || ||||| || Sbjct 354456 AAGCATGAAGCAAGTTGTGCTTGAGGTGTGCCAGCGCTGAACAGCGTCGGCGAAGCATGT 354397 Query 80368 GTAAACCATTTTTCAGACA-GTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTG 80426 || || | || | |||| |||| ||||||||||| || || | || || ||| Sbjct 354396 GTGAAATACTTGTTGGACATGTAG-TTGTACGTCTCGATCGCCGCATCAATGTCCTCGCC 354338 Query 80427 ATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTC 80471 || || ||||| ||||||||||| | ||||||||| || || || Sbjct 354337 GTGTATACCTACAGCGACACGCATGATCATGTGCTGTGGCCTCTC 354293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718266402777880