Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20antarcticum_20[genbank_20GCA_5F002077065.1_20201
7-04-03] 267 sequences; 47,410,550 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq176 150 3e-31
seq198 147 3e-30
>seq176
Length=738521
Score = 150 bits (166), Expect = 3e-31
Identities = 1131/1797 (63%), Gaps = 62/1797 (3%)
Strand=Plus/Minus
Query 78718 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 78777
||||| || ||||| || || || | | ||||| || |||||||| || || || ||
Sbjct 360038 GTGAACTGGATGGGCGCCGAGGCAGCCATGGTACGGAGGTAGTACATGCCAGTCTTCAGT 359979
Query 78778 CCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 78837
||||||| ||| ||| ||| ||||| ||| | ||| | | || || ||
Sbjct 359978 CCGAGACGCCAGCCGGTGAAGTGCATCGACGTGATCTTGCCCATAGTTGGCTCCTTCATG 359919
Query 78838 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 78897
||||| || | || || |||||||||||||| || | ||||| | ||| | |||
Sbjct 359918 TGGATGTTGAGTGACTGGGACTGATCGATGAAGGCGCCACGATCTGCTGACATCTGGATG 359859
Query 78898 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAA-CTCGCTTAATATCTTCTGGAAG 78956
|| | || || ||||| | ||| || || | ||| ||| || || || ||||
Sbjct 359858 ATGTTGCGCTGGCTGATCTCCCAGACAGTCTTGTACAGCTC-CTTGATTTCATCGGGAAT 359800
Query 78957 GTTTGTATT---CTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATT 79013
||| | | | |||||| || ||||||||||| || || | ||||| || | ||| |
Sbjct 359799 GTTGGGAATGCGCTGAATTGAACCACCATCTGCAATGATGCGGTTCTTCATGTTGTCACT 359740
Query 79014 CCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCC 79073
||| | | ||| | | |||| || ||||| || ||||| || |||||
Sbjct 359739 CCAAAGACCCATGTCGACGAGGTCCTTAAGCAGCCAAGGATTGACGACTTGGAACTCTCC 359680
Query 79074 AGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCC 79133
| ||| || | |||| ||| ||||| ||||| || || || | | || || ||
Sbjct 359679 GGCCAAGACACGACGAGAGTAGATATTGCTGGTGTACGGCTCAAAGCACTCGTTGAAGCC 359620
Query 79134 CAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 79193
|| || || | || || ||||||||||| || || | ||| || | || |||
Sbjct 359619 CATGATCTGCGATGTGCTCGCTGTTGGCATAGGAGCAACGAGTAAGGAGTTGCGAACACC 359560
Query 79194 GTATGATCTG--ATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAACA 79251
| || ||| ||| | || || | |||||| ||||| | |||| || |||
Sbjct 359559 G--TGCACTGCAATTCGCGCCTTGAGGGCTTCCCAGTCCCACAAGTCAGTGGGTGTCACA 359502
Query 79252 TTCCAAAGATCATATTGTAGAATACCGT-TACTAGCGTATGATCCTGTGTATGTTTCATA 79310
||| | || ||||| || || | | | | | || || | ||| || || ||
Sbjct 359501 CCCCACATGTCGTATTGGAGCTCGCCCTGTGAGATGGGA-GAGCCAGGGTAGGTCTCGTA 359443
Query 79311 AGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTC 79370
|| || ||| || || | |||||| || | ||| ||| || ||||| ||
Sbjct 359442 GGGACCGAGCTTCTCAGCAAGGTCACAAGATGCAGTAAGTGCGGCGTGGTACATGGTCTC 359383
Query 79371 GAAAATCTTCTTATTGAGATCTTGTGCTTC--TAGGCTATCAAATGGATAATTTAAGAG- 79427
||| |||| || ||||||| | ||||| ||| | || ||||| | ||||
Sbjct 359382 GAAGATCTGCTGATTGAGAAGACGAGCTTCCTTAGAC--TCGAATGG-CATGCGCAGAGC 359326
Query 79428 AATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGA 79487
| ||| ||||| || | || ||||||| ||| || || || |||| | | || |
Sbjct 359325 GAGAAAGGCGTCAGCCAGACCGCTGACACCAAGACCAATTGGCCTGTGTCGCATGTT-GC 359267
Query 79488 AATTTC-AGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCC--- 79543
|| | |||||| | || || | || | || || || || || || || |
Sbjct 359266 TGTTGCGAGCTTCAATCACCGGGTACTTGTTGACTTCGATGATCTTGTTCAGGTTGCGAG 359207
Query 79544 TGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCGTC--CATCT--AT- 79598
|||| | | ||||| || | || || || || || ||| | ||| ||
Sbjct 359206 TGACGACCTGTGTGACC---TCGTGGAGCTTCTTGAAGTCGTAT-GTCTGCTTCTGAATA 359151
Query 79599 TACAAACATGTT--CAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCC 79656
| | | ||||| | || | ||||| ||||| || || || || |||| | |
Sbjct 359150 TCGACATATGTTGGGAGTGCCAACGATGCAAGATTGCATACAGCCACTTCATCTGGGGCG 359091
Query 79657 GCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGA 79716
| || | || || || ||||| || || | |||||| || || |||| ||
Sbjct 359090 GTGTACTCGATGATCTCGGTGCACAGATTGGAGCTGCGAATGGTGCCCAAGTTTTTCTGG 359031
Query 79717 TTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGA 79776
|| ||||| ||| || || ||||| || ||| |||| | ||||| || |||||
Sbjct 359030 TTGCTCTTGCGGTTGGCGGCGTCTTTATACAGCATGTACGGGTTGCCAGTCTCGGTCTGA 358971
Query 79777 GATTCTATAATCGCTTTCCAGA----CGACTCGAGCCTTTATTATAGACTTGTATCTCTT 79832
| || | ||| || | ||||| | || || |||| | | | |||
Sbjct 358970 GCCTCAAGAATGGCATACCAGATTTTCTGGGCGCGC-------ATAG---TCTCACCCTT 358921
Query 79833 ---TTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAA 79889
||| || |||||| | || || | ||| || |||||||| |||| ||| | |
Sbjct 358920 GCCTTCGCTCTCGTATCGAGTGTAGAGCGCTTCAAATTCGTCTCCGTAAACGTCGGCAAG 358861
Query 79890 TCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCAT 79949
|| ||||| |||| || |||||||| | ||| || | | || | || ||||||||
Sbjct 358860 ACCGGGACACTCGTTCGGGCACATCAATGTCCAATCAGCGTTGTCTTGCACACGTTTCAT 358801
Query 79950 AAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCC 80009
|||||||| |||||||| || || || || || | | | | |||||| || ||
Sbjct 358800 GAAGAGATCGGGAATCCACAGTGCGTAGAACAGGTCACGAGCGCGAACCTCCTCCTTGCC 358741
Query 80010 TGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATAT 80069
||||| || |||||||||| || || || | ||||| || || | ||| ||
Sbjct 358740 GTGGTTCTTACGGAGGTCGAGGAACGACAAGATGTCTGCGTGCCATGGCTCAAGGTAGAT 358681
Query 80070 GGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATA 80129
||| | | || || || ||||| || ||||| || | |||||||| ||||| || |
Sbjct 358680 GGCAAACGCGCCGGGACGCTTGTTGCCGCCCTGGTCGACATATCTAGCCGTGTTGTTGAA 358621
Query 80130 AACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCC 80189
|| | | ||| || | | ||| || ||||| || || || || | || || |||
Sbjct 358620 CACCCGTAGCATGGGTACGAGACCGTTCGATGTGCCGTTTGTACCCGCAATGTACGATCC 358561
Query 80190 ACTGGCACGAAT---AT-TACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTA 80245
| | || ||||| || | | ||| || || || || || || |||| ||||| |
Sbjct 358560 AGTCGCCCGAATGCGATGTGC--GTTG--AGTCCGATGCCACCGGCGTTTTTCGAGATCA 358505
Query 80246 ATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTA 80305
|| || || | || || ||||| ||||| || ||||| || |||||| | |
Sbjct 358504 TCGCACAAGTCTTCAGTGTGTCGTAGATACCCTCAATACTATCGTCCTTCATGTCGATCA 358445
Query 80306 GAAAACAGCTAGACATTTGGTG-ACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCG 80364
|| || || || ||| | || || || | || | || || |||||
Sbjct 358444 AGAAGCA-TGAGGCAAGCTGTGCTTGTGGTGTGCCAGCGCTGAACAGCGTTGGCGAAGCA 358386
Query 80365 TGCGTAAACCATTTTTCAGACA-GTAGATTGTACGTCTCAATAGCTGATTCTATATCCCA 80423
|| || || | || | |||| |||| |||||||||||||| || | || || ||
Sbjct 358385 TGTGTGAAGTACTTGTTGGACATGTAG-TTGTACGTCTCAATCGCCGCATCGATGTCTTC 358327
Query 80424 TTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTT 80480
||| || || || || |||||||| | ||||||||| || || || ||| |||
Sbjct 358326 GCCATGTATACCCACTGCCACACGCATGATCATGTGCTGTGGCCTCTCCGCGACCTT 358270
>seq198
Length=398492
Score = 147 bits (162), Expect = 3e-30
Identities = 425/645 (66%), Gaps = 12/645 (2%)
Strand=Plus/Minus
Query 79833 TTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCC 79892
||| |||||||| |||| || | ||||||||| || || | |||||| | | ||
Sbjct 354931 TTCGCTTTCGTACCGTGTGTAGAGCGCTTCGAACTCATCCCCGTACACATCGGCAAGGCC 354872
Query 79893 AGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAA 79952
|| || |||| || ||||||| | ||| || | | ||| | || || ||||| ||
Sbjct 354871 GGGGCACTCGTTCGGGCACATCAGTGTCCAATCAGCGTTATCTTGCACACGCTTCATGAA 354812
Query 79953 GAGATCAGGAATCCAAAGAGC-TATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTG 80011
||||||||| ||||| ||||| || || || || | | | |||||| || ||
Sbjct 354811 GAGATCAGGGATCCACAGAGCGTAGAACAAG-TCACGAGCGCGGACCTCCTCCTTGCCGT 354753
Query 80012 TATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGG 80071
||||| || || ||||| | || || || | |||||||| || | ||| ||||
Sbjct 354752 GGTTCTTGCGCAGGTCAAGGAAGGACAAGATGTCTGCGTGCCACGGCTCGAGGTAGATGG 354693
Query 80072 CCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAA 80131
| | | || ||||| ||||| || ||||| || | || ||||| ||||| || | |
Sbjct 354692 CGAATGCGCCGGGTCGCTTGTTGCCACCCTGGTCGACATACCTAGCAGTGTTGTTGAACA 354633
Query 80132 CTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCAC 80191
| | | ||| || | | ||| || ||||| ||||| || || | || || |||
Sbjct 354632 CCCGTAGCATGGGTACGAGACCGTTTGATGTGCCATTTGTACCCGCAATGTACGAGCCAG 354573
Query 80192 TGGCACGAAT---AT-TACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAAT 80247
| || ||||| || | | ||| || || || || || || |||| ||||| |
Sbjct 354572 TCGCCCGAATGCGATGTGC--GTTG--AGTCCGATGCCACCGGCGTTTTTCGAGATCATC 354517
Query 80248 GCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGA 80307
|| || || | ||| || || |||||||| ||||| || || |||||| | ||
Sbjct 354516 GCACAAGTCTTCAGCGTGTCGTAAATGCCCTCAATGCTGTCGTCCTTCATGTCGATCAGG 354457
Query 80308 AAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGC 80367
|| || || | ||| || || || || | || | || || ||||| ||
Sbjct 354456 AAGCATGAAGCAAGTTGTGCTTGAGGTGTGCCAGCGCTGAACAGCGTCGGCGAAGCATGT 354397
Query 80368 GTAAACCATTTTTCAGACA-GTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTG 80426
|| || | || | |||| |||| ||||||||||| || || | || || |||
Sbjct 354396 GTGAAATACTTGTTGGACATGTAG-TTGTACGTCTCGATCGCCGCATCAATGTCCTCGCC 354338
Query 80427 ATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTC 80471
|| || ||||| ||||||||||| | ||||||||| || || ||
Sbjct 354337 GTGTATACCTACAGCGACACGCATGATCATGTGCTGTGGCCTCTC 354293
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718266402777880
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