Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20antarcticum_20[genbank_20GCA_5F002077065.1_20201
7-04-03] 267 sequences; 47,410,550 total letters
Query= NC_004117.1
Length=158482
Score E
Sequences producing significant alignments: (Bits) Value
seq112 107 2e-18
>seq112
Length=1778705
Score = 107 bits (118), Expect = 2e-18
Identities = 288/435 (66%), Gaps = 9/435 (2%)
Strand=Plus/Plus
Query 50437 GTTGAAGGTGTGtttttttCCGGTAGCTTTGCAGCCATATTTTACATTAAAACCTTAGGC 50496
||||| ||| | || || ||||| ||| || ||||| || | | || | |||
Sbjct 1416734 GTTGAGGGTATCTTCTTCTCCGGCTCCTTCGCTGCCATCTTCTGGCTCAAGAAGCGCGGC 1416793
Query 50497 ATAATGCCCGGCCTCACGTTTAGCAACGAGTTGATTTCGCGCGACGAAGGAATGCACACA 50556
| ||||||||||||||||| || ||| | || ||||| ||||| || ||||||||
Sbjct 1416794 CTCATGCCCGGCCTCACGTTCTCTAATGAGCTCATCTCGCGTGACGAGGGCATGCACACC 1416853
Query 50557 GACTTTGCGTGTTTGTACTACAATACGCGCGTAAATGAAAAATT--ATCATACGAAACAA 50614
|||||||| || || || || ||| | | | || | |||| |||
Sbjct 1416854 GACTTTGCCTGCATG--CTGCA---CGCACATCTCCGCAACAAGCCATCACTCGACCTCG 1416908
Query 50615 TTTTGGACATGTTCAAAGAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCTTTAC 50674
| | || ||| || |||||||| ||||| ||||||| | ||||||| | |
Sbjct 1416909 TCCACCAGATCATCACCGAGGCCGTCGAGATCGAGCAAGAGTTCCTATCGGACGCCCTGC 1416968
Query 50675 CCGTGGCATTGTTGGGCATGAACGCAGACATGATGTGCGAGTACATTGAGTTTGTTGCAG 50734
|| ||| | | ||||||||||| | | |||||| ||||||| |||||||| || |
Sbjct 1416969 CCTGCGCACTTCTCGGCATGAACGCCAAGCTCATGTGCCAGTACATCGAGTTTGTCGCTG 1417028
Query 50735 ACAG-ATTGTTGTTGCAGCTGGGACAACCGAAATACTATAATGCACGTAACCCCTTTCCG 50793
|| | | | | ||| || || || || ||||| ||||| ||||||||
Sbjct 1417029 ACCGTCTACTCCTCGCA-CTCGGCCACAGCAAGTACTACAATGCCACCAACCCCTTCGAC 1417087
Query 50794 TTTATGAATAACATATCGTTGGAGGGCAAAACAAACTTTTTCGAAAGACGTGTAGGCGAA 50853
|| ||| | ||||| || | | ||||| |||||||| ||||| | || ||||| ||
Sbjct 1417088 TTCATGGAGAACATCTCCCTCGCCGGCAAGACAAACTTCTTCGAGAAGCGCGTAGGTGAC 1417147
Query 50854 TACAAAATGTTTGGT 50868
||| ||| | ||||
Sbjct 1417148 TACCAAAAGGCTGGT 1417162
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 507012707839440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |