Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20antarcticum_20[genbank_20GCA_5F002077065.1_20201
7-04-03] 267 sequences; 47,410,550 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq112 297 3e-75
seq1 257 2e-63
seq176 145 1e-29
seq198 131 2e-25
>seq112
Length=1778705
Score = 297 bits (328), Expect = 3e-75
Identities = 582/846 (69%), Gaps = 27/846 (3%)
Strand=Plus/Plus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| |||||||||| ||||| |||| || || ||||| | || ||| ||||||||
Sbjct 1416308 ATATGGCAAATGTACAAGAAGGCAGAGGCATCGTTCTGGACAGCAGAGGAGATCGATCTG 1416367
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
|| ||||||||| |||| ||| | | ||| | | || |||||| || || |||
Sbjct 1416368 TCGAAGGACCTGCACGACTGGAACAAGCGTCTCAACGATGACGAGCGATTCTTCATTTCG 1416427
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGA 125198
|| | | |||||||| |||| || || || || |||||||| || ||| | |||
Sbjct 1416428 CATGTCCTTGCCTTCTTCGCCGCATCAGACGGCATTGTCAACGAGAACCTGGTCGAGCGA 1416487
Query 125199 TTCTCTCAAGAGTTGACCATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATCATGAT 125257
||| | ||| || || || |||| ||| ||||| ||||| ||||| ||||||||
Sbjct 1416488 TTCAGTGGCGAGGTGCAAATACCCGAGGC-TCGCTGCTTCTACGGCTTCCAGATCATGAT 1416546
Query 125258 TGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCGC- 125316
|||||| | ||||| || | ||||| ||| || |||| ||||| |||| || |
Sbjct 1416547 GGAGAACATCCACTCCGAGACCTACTCACTACTCATCGACACCTACATCAGCGAACCTCG 1416606
Query 125317 --AACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGC 125374
|||| | | || ||||| ||||| ||||||| | || | || || || |||||
Sbjct 1416607 CCAACGCACATAC---CTCTTCAACGCTATCGACAACATCCCCTGCATCCGCAAGAAGGC 1416663
Query 125375 TCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGC 125434
| | |||| | ||||||| |||||| || | | || | | | || | ||
Sbjct 1416664 TAACTGGGCACTAAAGTGGATCAGCGACGACGCATCGACCTTCGGCTGCCGTCTTATCGC 1416723
Query 125435 ATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAA 125494
||||| || || ||||| |||||||| || || || || |||||||| ||||||||
Sbjct 1416724 CTTCGCAGCTGTTGAGGGTATCTTCTTCTCCGGCTCCTTCGCTGCCATCTTCTGGCTCAA 1416783
Query 125495 GAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGG 125554
||||||||| ||||||||||| || ||| | ||| ||| | || || || ||||||||
Sbjct 1416784 GAAGCGCGGCCTCATGCCCGGCCTCACGTTCTCTAATGAGCTCATCTCGCGTGACGAGGG 1416843
Query 125555 CCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAGTGCAGATC 125614
| | ||| ||||||||| | ||| |||| |||| || | | || | |
Sbjct 1416844 CATGCACACCGACTTTGCCTGCATGCTG-CACGCA--CATCTCCG---CAA---CA-AGC 1416893
Query 125615 CAGCGAT-GAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTTC 125673
|| | | || ||| | | || | ||||| ||||| ||| || |||||||| |
Sbjct 1416894 CATCACTCGACCTCGTCCACCAGATCATCACCGAGGCCGTCGAGATCGAGCAAGAGTTCC 1416953
Query 125674 TAACCGAATCCCTACCGGTCAGCA-TGATTGGCATGAACTGCAAGCTAATGTGCGAGTAC 125732
|| | || |||| || | ||| | | ||||||||| |||||| |||||| |||||
Sbjct 1416954 TATCGGACGCCCTGCC-CTGCGCACTTCTCGGCATGAACGCCAAGCTCATGTGCCAGTAC 1417012
Query 125733 ATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCC---GCAAGATTTACAAC 125789
|| |||||||| || || |||||||| || | |||| ||||| |||||
Sbjct 1417013 ATCGAGTTTGTCGCTGACCGTCTACTCCTCG---CACTCGGCCACAGCAAGTACTACAAT 1417069
Query 125790 GCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTTTTC 125849
|||| || ||||| || |||||| | ||| || || | || ||||| ||||| |||
Sbjct 1417070 GCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGCCGGCAAGACAAACTTCTTC 1417129
Query 125850 GAGAAG 125855
||||||
Sbjct 1417130 GAGAAG 1417135
>seq1
Length=1805414
Score = 257 bits (284), Expect = 2e-63
Identities = 573/846 (68%), Gaps = 27/846 (3%)
Strand=Plus/Plus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| | |||||||| ||||| |||| || || ||||| | || ||| | ||||||
Sbjct 289383 ATATGGCAGATGTACAAGAAGGCAGAGGCATCATTCTGGACAGCAGAGGAGATTGATCTG 289442
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
|| || || ||| |||| ||| | | ||| | | ||| |||||| || || ||
Sbjct 289443 TCGAAAGATCTGCACGACTGGAACAAGCGTCTCAATGATGACGAGCGATTCTTCATTTCA 289502
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGA 125198
|| | | |||||||| |||| || || || ||||||||||| || ||| | |||
Sbjct 289503 CATGTGCTTGCCTTCTTCGCCGCATCAGACGGCATCGTCAACGAGAACCTGGTCGAGCGA 289562
Query 125199 TTCTCTCAAGAGTTGACCATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATCATGAT 125257
|| | ||| || || || |||| ||| ||||| ||||| ||||| ||||||||
Sbjct 289563 TTTAGTGGCGAGGTGCAAATCCCTGAGGC-TCGCTGCTTCTACGGCTTCCAGATCATGAT 289621
Query 125258 TGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCGC- 125316
||||| | ||||| || | ||||| ||| || |||| ||||| |||| || |
Sbjct 289622 GGAGAATATCCACTCCGAGACCTACTCACTACTTATCGACACCTACATCAGCGAACCTCG 289681
Query 125317 --AACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGC 125374
|||| | | || ||||||||||| ||||||| | |||| || || || |||||
Sbjct 289682 CCAACGCACATAC---CTCTTTAACGCTATCGACAATATCCCGTGCATCCGCAAGAAGGC 289738
Query 125375 TCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGC 125434
| |||| | ||||||| |||||| || | | || | | | || | ||
Sbjct 289739 CAACTGGGCACTAAAGTGGATCAGCGACGACGCATCGACCTTCGGCTGCCGTCTCATCGC 289798
Query 125435 ATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAA 125494
||||| || || |||||||| ||||| || ||| || || || ||||| ||||||||
Sbjct 289799 CTTCGCAGCTGTCGAGGGCATTTTCTTCTCTGGTTCGTTCGCCGCTATCTTCTGGCTCAA 289858
Query 125495 GAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGG 125554
||||||||| || |||||||| || || | |||||| | || || || ||||||||
Sbjct 289859 GAAGCGCGGGCTGATGCCCGGCCTCACCTTCTCCAACGAGCTCATTTCCCGTGACGAGGG 289918
Query 125555 CCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAGTGCAGATC 125614
| | ||| ||||| ||| | | ||| |||| |||| || | | || | |
Sbjct 289919 CATGCACACCGACTTCGCCTGTATGCTG-CACGCA--CATCTCCG---CAA---CA-AGC 289968
Query 125615 CAGCGAT-GAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTTC 125673
|| | | || ||| | | || | || || || || ||| || |||||||| |
Sbjct 289969 CATCACTCGACCTTGTCCACCAGATCATCACGGAAGCTGTCGAGATCGAGCAAGAGTTCC 290028
Query 125674 TAACCGAATCCCTACCGGTCAGCA-TGATTGGCATGAACTGCAAGCTAATGTGCGAGTAC 125732
| | || ||||||| | ||| | | ||||||||| |||||| |||||| |||||
Sbjct 290029 TTTCAGACGCCCTACC-CTGCGCACTTCTCGGCATGAACGCCAAGCTCATGTGCCAGTAC 290087
Query 125733 ATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCC---GCAAGATTTACAAC 125789
|| ||||| || || || || ||||| || | |||| ||||| ||||||
Sbjct 290088 ATCGAGTTCGTCGCTGACCGCCTACTCCTCG---CACTCGGCCACAGCAAGTACTACAAC 290144
Query 125790 GCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTTTTC 125849
|||| || ||||| || |||||| | ||| || || | || ||||| ||||| |||
Sbjct 290145 GCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGCCGGCAAGACGAACTTCTTC 290204
Query 125850 GAGAAG 125855
||||||
Sbjct 290205 GAGAAG 290210
>seq176
Length=738521
Score = 145 bits (160), Expect = 1e-29
Identities = 329/487 (68%), Gaps = 11/487 (2%)
Strand=Plus/Plus
Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935
||||||||||| || || || ||||| | ||| ||||| | || || |||||||| |||
Sbjct 358648 CAGGGCGGCAACAAGCGTCCCGGCGCGTTTGCCATCTACCTTGAGCCATGGCACGCAGAC 358707
Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995
| || || |||| | || || ||| ||| || |||| || || | |||
Sbjct 358708 ATCTTGTCGTTCCTCGACCTCCGTAAGAACCACGGCAAGGAGGAGGTTCGCGCTCGTGAC 358767
Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGT-CAA--CGACGGTGGC 97052
|||| || ||||| ||| | || ||| | |||||||| || || ||| | ||| ||
Sbjct 358768 CTGTTCTACGCACTGTGGATTCCCGATCTCTTCATGAAACGTGTGCAAGACAACGCTG-- 358825
Query 97053 TACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAG 97112
| |||| | |||||||| || || |||||||| |||| | || || ||
Sbjct 358826 -ATTGGACATTGATGTGCCCGAACGAGTGTCCCGGTCTTGCCGACGTTTACGGAGACGAA 358884
Query 97113 TTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTGAGACGAGTCGATGCA 97172
||||| || ||||| |||||| || ||| | ||||||| | || |
Sbjct 358885 TTTGAAGCGCTCTACACTCGATACGAGAGCGAAGGC--AAGGGTGAGACTATGCGCGCCC 358942
Query 97173 CGAGAACTGTGGAAGGCCAT-CGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCT 97231
|| || | ||| | ||||| | ||| ||||||| |||||||| | |||||||| ||
Sbjct 358943 AGAAAA-TCTGGTATGCCATTCTTGA-GGCTCAGACCGAGACTGGCAACCCGTACATGCT 359000
Query 97232 CTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTC 97291
|| || || ||| || ||||| |||||||| ||||||||||||| ||||
Sbjct 359001 GTATAAAGACGCCGCCAACCGCAAGAGCAACCAGAAAAACTTGGGCACCATTCGCAGCTC 359060
Query 97292 CAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTCT 97351
|||||||||||| || || | |||||| || | || || || ||| || ||| |||
Sbjct 359061 CAATCTGTGCACCGAGATCATCGAGTACACCGCCCCAGATGAAGTGGCTGTATGCAATCT 359120
Query 97352 GGCATCG 97358
||||||
Sbjct 359121 TGCATCG 359127
>seq198
Length=398492
Score = 131 bits (144), Expect = 2e-25
Identities = 311/462 (67%), Gaps = 11/462 (2%)
Strand=Plus/Plus
Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935
||||| ||||| || || || ||||| | ||| ||||| | || || |||||||| |||
Sbjct 354662 CAGGGTGGCAACAAGCGACCCGGCGCATTCGCCATCTACCTCGAGCCGTGGCACGCAGAC 354721
Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995
| || ||| | || ||||||| ||| ||| || |||| || || | |||
Sbjct 354722 ATCTTGTCCTTCCTTGACCTGCGCAAGAACCACGGCAAGGAGGAGGTCCGCGCTCGTGAC 354781
Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGT-CA--ACGACGGTGGC 97052
||||| || || || ||| | || ||| | ||||||||||| || || | ||| ||
Sbjct 354782 TTGTTCTACGCTCTGTGGATCCCTGATCTCTTCATGAAGCGTGTGCAAGATAACGCTG-- 354839
Query 97053 TACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAG 97112
| |||| || |||||||| || || ||||| || ||||| | || || |||
Sbjct 354840 -ATTGGACACTGATGTGCCCGAACGAGTGCCCCGGCCTTGCCGATGTGTACGGGGATGAG 354898
Query 97113 TTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTGAGACGAGTCGATGCA 97172
|| || || ||||| ||||| || ||| | ||||||| | || ||
Sbjct 354899 TTCGAAGCGCTCTACACACGGTACGAAAGCGAAGGC--AAGGGTGAGACTATGCG-CGC- 354954
Query 97173 CGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCT 97231
| |||| | ||| | ||||| | ||||||| |||||||| | |||||||| ||
Sbjct 354955 CCAGAAGATTTGGTATGCCATTCTCGAGGCTCAGACCGAGACTGGCAACCCGTACATGCT 355014
Query 97232 CTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTC 97291
||||| || | | || ||||| |||||||| |||||||||| || ||||
Sbjct 355015 GTACAAAGACGCTGCCAACCGCAAGAGCAACCAGAAGAACTTGGGCACAATTCGCAGCTC 355074
Query 97292 CAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGA 97333
||| ||||||| || || | |||||| || |||| |||||
Sbjct 355075 CAACTTGTGCACCGAGATCATCGAGTACACCGCTCCTGACGA 355116
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741056726714920
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