Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rachicladosporium_20antarcticum_20[genbank_20GCA_5F002077065.1_20201 7-04-03] 267 sequences; 47,410,550 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq184 86.0 5e-12 seq228 82.4 6e-11 >seq184 Length=1511567 Score = 86.0 bits (94), Expect = 5e-12 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 15160 ATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTG 15219 |||||||||||| ||||| || |||||||| ||| || | | | || || | || Sbjct 735952 ATGAAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGCTG 736011 Query 15220 TTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT 15279 ||||| ||| | ||||| || || ||||| ||||| || || ||||| || || Sbjct 736012 CTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCTTGGATCTT 736071 Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339 |||||| ||| | || ||||| ||| | || || || | ||| ||||| || || || Sbjct 736072 GCTCTTGACATTGTCGATGGTGTCGGAGCTCTCCACCTCAAGGGTGATGGTCTTGCCGGT 736131 Query 15340 CAGAGTTTTTACAAA 15354 || ||||| || || Sbjct 736132 CAAGGTTTTGACGAA 736146 >seq228 Length=1254254 Score = 82.4 bits (90), Expect = 6e-11 Identities = 135/195 (69%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 15160 ATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTG 15219 ||| |||||||| || || || |||||||||||| || | | | || || | || Sbjct 556037 ATGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGGCCATCCTCGAGCTG 556096 Query 15220 TTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT 15279 ||||| ||| | ||||| || || ||||| || || || |||||||| || || Sbjct 556097 CTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGCGGGATGCCCTCTTTGTCTTGGATCTT 556156 Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339 |||||| ||| | || ||||| ||| | || || || | ||| ||||| || || || Sbjct 556157 GCTCTTGACATTGTCGATGGTGTCGGAGCTCTCCACCTCAAGGGTGATGGTCTTGCCGGT 556216 Query 15340 CAGAGTTTTTACAAA 15354 || || ||||| || Sbjct 556217 CAAGGTCTTTACGAA 556231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362178021446247