Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20antarcticum_20[genbank_20GCA_5F002077065.1_20201
7-04-03] 267 sequences; 47,410,550 total letters
Query= NC_004778.3
Length=129593
Score E
Sequences producing significant alignments: (Bits) Value
seq184 86.0 5e-12
>seq184
Length=1511567
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874
||||| |||| | || ||||| ||||| ||| |||||||| || || ||||| || |
Sbjct 735473 CCTCCACGCAGACGTAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 735532
Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934
| || || ||||||||| ||| || || || | || || | |||||| || ||
Sbjct 735533 AAAGTCCTGCCGTCCTCCAACTGCTTCCCGGCGAAGATGAGACGCTGCTGGTCTGGTGGG 735592
Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTT 18994
| ||||| || || ||| ||| || || | | ||| || || | |||
Sbjct 735593 ATACCCTCCTTATCCTGAATCTTCGACTTCACGTTGTCGATCGTGTCTGATGATTCCACC 735652
Query 18995 TCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041
|||| || ||||| || ||||| | ||| ||||| |||||||||||
Sbjct 735653 TCGAGCGTGATGGTCTTGCCTGTGAGAGTCTTGACGAAAATTTGCAT 735699
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 414571450954198
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |