Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20antarcticum_20[genbank_20GCA_5F002077065.1_20201
7-04-03] 267 sequences; 47,410,550 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq228 100 4e-17
seq193 100 4e-17
>seq228
Length=1254254
Score = 100 bits (110), Expect = 4e-17
Identities = 83/99 (84%), Gaps = 2/99 (2%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| |||| ||||| | || || |||||||| || ||||||||||| || ||
Sbjct 1096008 GCCAAGCGTCACCGCAAGATCT-TGCGCGACAACATCCAGGGTATCACCAAGCCCGCGAT 1095950
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530
||||||||| || |||||||| || ||||||||| ||||
Sbjct 1095949 CCGTCGTCTCGCACGTCGTGGCGGTGTCAAGCGTATCTC 1095911
Score = 87.8 bits (96), Expect = 3e-13
Identities = 117/163 (72%), Gaps = 0/163 (0%)
Strand=Plus/Minus
Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595
|| |||| || |||| || | ||| | |||| ||||||| || || |||| || |
Sbjct 1095852 TGATCTACGAGGAGACCCGCGGCGTTCTCAAGACCTTCCTCGAGGGTGTCATCCGCGACG 1095793
Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655
| || ||| ||||||||||| || || ||||| ||||||||| | || ||||||| |
Sbjct 1095792 CAGTCACCTACACCGAGCACGCCAAGCGCAAGACCGTCACCTCCCTCGACGTCGTCTACG 1095733
Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTA 16698
| | || ||||||||||| | | || ||||| || ||||
Sbjct 1095732 CCCTCAAGCGTCAAGGCCGCACTCTGTACGGTTTCGGCGGTTA 1095690
>seq193
Length=432561
Score = 100 bits (110), Expect = 4e-17
Identities = 83/99 (84%), Gaps = 2/99 (2%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| |||| ||||| | || || |||||||| || ||||||||||| || ||
Sbjct 159978 GCCAAGCGTCACCGCAAGATCT-TGCGCGACAACATCCAGGGTATCACCAAGCCCGCGAT 160036
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530
||||||||| || |||||||| || ||||||||| ||||
Sbjct 160037 CCGTCGTCTCGCACGTCGTGGCGGTGTCAAGCGTATCTC 160075
Score = 100 bits (110), Expect = 4e-17
Identities = 120/163 (74%), Gaps = 0/163 (0%)
Strand=Plus/Plus
Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595
|| |||| || |||| || | |||| |||||| ||||||| || || |||| || |
Sbjct 160136 TGATCTACGAGGAGACCCGCGGTGTTCTGAAGACCTTCCTCGAGGGTGTCATCCGCGACG 160195
Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655
| || ||| ||||||||||| || || ||||| ||||||||| | || ||||||| |
Sbjct 160196 CAGTCACCTACACCGAGCACGCCAAGCGCAAGACCGTCACCTCCCTCGACGTCGTCTACG 160255
Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTA 16698
|| | || ||||||||||| | | || ||||| || ||||
Sbjct 160256 CACTCAAGCGTCAAGGCCGCACTCTGTACGGTTTCGGCGGTTA 160298
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79074955880031
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |