Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rachicladosporium_20antarcticum_20[genbank_20GCA_5F002077065.1_20201 7-04-03] 267 sequences; 47,410,550 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq176 149 8e-31 seq198 147 3e-30 >seq176 Length=738521 Score = 149 bits (164), Expect = 8e-31 Identities = 431/654 (66%), Gaps = 12/654 (2%) Strand=Plus/Minus Query 63110 TTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCC 63169 ||| || |||||| | || || | ||| || |||||||| |||| | | | | || Sbjct 358917 TTCGCTCTCGTATCGAGTGTAGAGCGCTTCAAATTCGTCTCCGTAAACGTCGGCAAGACC 358858 Query 63170 AGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAA 63229 ||||| || | ||| |||||||| | ||| || ||| || | ||| |||||||| || Sbjct 358857 GGGACACTCGTTCGGGCACATCAATGTCCAATCAGCGTTGTCTTGCACACGTTTCATGAA 358798 Query 63230 GAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGT 63289 |||||| |||||||| || || || || || | | | | ||||| || || Sbjct 358797 GAGATCGGGAATCCACAGTGCGTAGAACAGGTCACGAGCGCGAACCTCCTCCTTGCCGTG 358738 Query 63290 ATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGC 63349 ||||| || |||||||||| || || || | ||||| || || | ||| ||||| Sbjct 358737 GTTCTTACGGAGGTCGAGGAACGACAAGATGTCTGCGTGCCATGGCTCAAGGTAGATGGC 358678 Query 63350 CATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAAC 63409 | | || || || ||||| || ||||| || | |||||||| ||||| || | || Sbjct 358677 AAACGCGCCGGGACGCTTGTTGCCGCCCTGGTCGACATATCTAGCCGTGTTGTTGAACAC 358618 Query 63410 TCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACT 63469 | | ||| || | | |||||| ||| | || || ||||| | || || |||| | Sbjct 358617 CCGTAGCATGGGTACGAGACCGTTCGATGTGCCGTTTGTACCCGCAATGTACGATCCAGT 358558 Query 63470 GGCACGAAT---AT-TACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 63525 || ||||| || | | |||| | || || || || || |||| ||||| | | Sbjct 358557 CGCCCGAATGCGATGTGCG--TTGA--GTCCGATGCCACCGGCGTTTTTCGAGATCATCG 358502 Query 63526 CGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAA 63585 | || || | ||||| ||||||||||| || ||||| || |||||| | | | Sbjct 358501 CACAAGTCTTCAGTGTGTCGTAGATACCCTCAATACTATCGTCCTTCATGTCGATCAAGA 358442 Query 63586 AACAGCTAGACATTTGGTG-ACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGC 63644 | || || || ||| | || || || | || | || || ||||| || Sbjct 358441 AGCA-TGAGGCAAGCTGTGCTTGTGGTGTGCCAGCGCTGAACAGCGTTGGCGAAGCATGT 358383 Query 63645 GTAAACCATTTTTCAGA-AAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTG 63703 || || | || | || | |||| |||||||||||||| || | || || || Sbjct 358382 GTGAAGTACTTGTTGGACATGTAG-TTGTACGTCTCAATCGCCGCATCGATGTCTTCGCC 358324 Query 63704 ATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTT 63757 ||| || || ||||| |||||||| | ||||||||| || || || ||| ||| Sbjct 358323 ATGTATACCCACTGCCACACGCATGATCATGTGCTGTGGCCTCTCCGCGACCTT 358270 Score = 100 bits (110), Expect = 4e-16 Identities = 303/465 (65%), Gaps = 5/465 (1%) Strand=Plus/Minus Query 61995 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62054 ||||| || ||||| || || || | | ||||| || |||||||| || || || || Sbjct 360038 GTGAACTGGATGGGCGCCGAGGCAGCCATGGTACGGAGGTAGTACATGCCAGTCTTCAGT 359979 Query 62055 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 62114 ||||||| ||| ||| || ||||| ||| | ||| | | || || || Sbjct 359978 CCGAGACGCCAGCCGGTGAAGTGCATCGACGTGATCTTGCCCATAGTTGGCTCCTTCATG 359919 Query 62115 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 62174 ||||| || | || || |||||||||||||| || | ||||| | ||| | ||| Sbjct 359918 TGGATGTTGAGTGACTGGGACTGATCGATGAAGGCGCCACGATCTGCTGACATCTGGATG 359859 Query 62175 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAA-CTCGCTTAATATCTTCTGGAAG 62233 || | || || ||||| | ||| || || | ||| ||| || || || |||| Sbjct 359858 ATGTTGCGCTGGCTGATCTCCCAGACAGTCTTGTACAGCTC-CTTGATTTCATCGGGAAT 359800 Query 62234 GTTTGTATT---CTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATT 62290 ||| | | | |||||| || ||||||||||| || || | ||||| || | ||| | Sbjct 359799 GTTGGGAATGCGCTGAATTGAACCACCATCTGCAATGATGCGGTTCTTCATGTTGTCACT 359740 Query 62291 CCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCC 62350 ||| | | ||| | | |||| || ||||| || ||||| || ||||| Sbjct 359739 CCAAAGACCCATGTCGACGAGGTCCTTAAGCAGCCAAGGATTGACGACTTGGAACTCTCC 359680 Query 62351 AGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCC 62410 | ||| || | |||| ||| ||||| ||||| ||||| || | |||| || || Sbjct 359679 GGCCAAGACACGACGAGAGTAGATATTGCTGGTGTACGGCTCAAAGCACTCGTTGAAGCC 359620 Query 62411 CAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAA 62455 || || || | || || || |||||||| || || | ||| Sbjct 359619 CATGATCTGCGATGTGCTCGCTGTTGGCATAGGAGCAACGAGTAA 359575 >seq198 Length=398492 Score = 147 bits (162), Expect = 3e-30 Identities = 425/645 (66%), Gaps = 12/645 (2%) Strand=Plus/Minus Query 63110 TTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCC 63169 ||| |||||||| |||| || | ||||||||| || || | |||| | | | || Sbjct 354931 TTCGCTTTCGTACCGTGTGTAGAGCGCTTCGAACTCATCCCCGTACACATCGGCAAGGCC 354872 Query 63170 AGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAA 63229 || || || | ||| ||||||| | ||| || ||| ||| | ||| || ||||| || Sbjct 354871 GGGGCACTCGTTCGGGCACATCAGTGTCCAATCAGCGTTATCTTGCACACGCTTCATGAA 354812 Query 63230 GAGATCAGGAATCCAAAGAGC-TATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTG 63288 ||||||||| ||||| ||||| || || || || | | | ||||| || || Sbjct 354811 GAGATCAGGGATCCACAGAGCGTAGAACAAG-TCACGAGCGCGGACCTCCTCCTTGCCGT 354753 Query 63289 TATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGG 63348 ||||| || || ||||| | || || || | |||||||| || | ||| |||| Sbjct 354752 GGTTCTTGCGCAGGTCAAGGAAGGACAAGATGTCTGCGTGCCACGGCTCGAGGTAGATGG 354693 Query 63349 CCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAA 63408 | | | || || || ||||| || ||||| || | || ||||| ||||| || | | Sbjct 354692 CGAATGCGCCGGGTCGCTTGTTGCCACCCTGGTCGACATACCTAGCAGTGTTGTTGAACA 354633 Query 63409 CTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCAC 63468 | | | ||| || | | |||||||||| | ||||| ||||| | || || ||| Sbjct 354632 CCCGTAGCATGGGTACGAGACCGTTTGATGTGCCATTTGTACCCGCAATGTACGAGCCAG 354573 Query 63469 TGGCACGAAT---AT-TACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAAT 63524 | || ||||| || | | ||| || || || || || || |||| ||||| | Sbjct 354572 TCGCCCGAATGCGATGTGC--GTTG--AGTCCGATGCCACCGGCGTTTTTCGAGATCATC 354517 Query 63525 GCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGA 63584 || || || | |||||| || || ||||| ||||| || || |||||| | || Sbjct 354516 GCACAAGTCTTCAGCGTGTCGTAAATGCCCTCAATGCTGTCGTCCTTCATGTCGATCAGG 354457 Query 63585 AAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGC 63644 || || || | ||| || || || || | || | || || ||||| || Sbjct 354456 AAGCATGAAGCAAGTTGTGCTTGAGGTGTGCCAGCGCTGAACAGCGTCGGCGAAGCATGT 354397 Query 63645 GTAAACCATTTTTCAGA-AAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTG 63703 || || | || | || | |||| ||||||||||| || || | || || ||| Sbjct 354396 GTGAAATACTTGTTGGACATGTAG-TTGTACGTCTCGATCGCCGCATCAATGTCCTCGCC 354338 Query 63704 ATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTC 63748 || || ||||| ||||||||||| | ||||||||| || || || Sbjct 354337 GTGTATACCTACAGCGACACGCATGATCATGTGCTGTGGCCTCTC 354293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622945120913720