Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rachicladosporium_20antarcticum_20[genbank_20GCA_5F002077065.1_20201 7-04-03] 267 sequences; 47,410,550 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq176 311 2e-79 seq198 293 6e-74 >seq176 Length=738521 Score = 311 bits (344), Expect = 2e-79 Identities = 1108/1706 (65%), Gaps = 43/1706 (3%) Strand=Plus/Plus Query 363454 CCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCGCG 363513 || ||||| ||| | |||||||| || | ||||| ||| || || | ||||| ||| Sbjct 358285 CCACAGCACATGATCATGCGTGTGGCAGTGGGTATACATGGCGAAGACATCGATGCGGCG 358344 Query 363514 ATTGAAACATATAAGCTTCTAAGTGCT-CGTGTA-TTCACGCACGCCACGCCAACAATGT 363571 ||||| || || || || | | || | | ||| ||||| || || ||||||| ||| Sbjct 358345 ATTGAGACGTACAA-CTAC-ATGTCCAACAAGTACTTCACACATGCTTCGCCAACGCTGT 358402 Query 363572 ACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACG 363631 || ||||| || | | ||||| | | || ||||| | | | |||||||||| Sbjct 358403 TCAGCGCTGGCACACCACAAGCACAGCTTGCCTCATGCTTCTTGATCGACATGAAGGACG 358462 Query 363632 ATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAG 363691 || || |||||||||| |||||||| |||| |||||| | || || || || || | Sbjct 358463 ATAGTATTGAGGGTATCTACGACACACTGAAGACTTGTGCGATGATCTCGAAAAACGCCG 358522 Query 363692 GCGGAATTGGTGTATCGATCCACAATG--TTCGTGC-ACAGAACAGTTACATTCGCGGCA 363748 | || || || | | | |||| | |||| || || | | || ||||| || | Sbjct 358523 GTGGCATCGGACT--CAACGCACATCGCATTCGGGCGACTGGATCGT-ACATTGCGGGTA 358579 Query 363749 CAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGT 363808 || || ||||| || || || |||||||| || ||||| |||| || || || | Sbjct 358580 CAAACGGCACATCGAACGGTCTCGTACCCATGCTACGGGTGTTCAACAACACGGCTAGAT 358639 Query 363809 ACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATC 363868 | ||||||||||| || ||||| || |||||||| || || || ||||| | Sbjct 358640 ATGTCGACCAGGGCGGCAACAAGCGTCCCGGCGCGTTTGCCATCTACCTTGAGCCATGGC 358699 Query 363869 ATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTG 363928 | || || || || ||| || || ||||| || ||| || || ||||| | || | Sbjct 358700 ACGCAGACATCTTGTCGTTCCTCGACCTCCGTAAGAACCACGGCAAGGAGGAGGTTCGCG 358759 Query 363929 CACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTG-GAGGCA 363987 | ||||| |||||||| ||||| ||| || | || | || ||||| || ||| || || Sbjct 358760 CTCGTGACCTGTTCTACGCACTGTGGATTCCCGATCTCTTCATGAAACGTGTGCAAGACA 358819 Query 363988 GGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGT 364047 | ||||| || | | ||||| |||| ||||| |||||| |||| || | || Sbjct 358820 ACGCTG-ATTGGACATTGATGTGCCCGAACGAGTGTCCCGGTCTTGCCGACGTTTACGGA 358878 Query 364048 GACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAATT 364107 ||||| | || || || ||| || || || || |||| || |||| || Sbjct 358879 GACGAATTTGAAGCGCTCTACACTCGATACGAGAGCGAAGGCAAGG---GTGAGACTATG 358935 Query 364108 CCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTAT 364167 | ||| ||||| | |||| |||||| | || | |||| ||||| || | || || Sbjct 358936 CGCGCCCAGAAAATCTGGTATGCCATTCTTGAGGCTCAGACCGAGACTGGCAACCCGTAC 358995 Query 364168 ATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAG 364227 ||| |||| ||||| | |||||||||| ||||||| | || | || || |||| | Sbjct 358996 ATGCTGTATAAAGACGCCGCCAACCGCAAGAGCAACCAGAAAAACTTGGGCACCATTC-G 359054 Query 364228 CAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATG 364286 ||| ||| || || |||||||| || || |||||||| || || || || ||||| Sbjct 359055 CAGCTCCAATCTGTGCACCGAGATCATCGAGTACACCGCCCCAGATGAAGTGGCTGTATG 359114 Query 364287 TAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAA-----AGATG-GTACTTTTGACCA 364340 || ||||| ||| | || || || | | ||| | ||| | || | ||| Sbjct 359115 CAATCTTGCATCGTTGGCACTCCCAACATATGTCGATATTCAGAAGCAGACATACGACTT 359174 Query 364341 CCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGACAA 364400 | || | || | || || || | | ||| |||| || ||||| | ||||| Sbjct 359175 CAAGAAGCTCCACGAGGTCACACAGGTCGTCACTCGCAACCTGAACAAGATCATCGAAGT 359234 Query 364401 GAATTATTATCCAATTCCTGAAGC-CG----AGCGTTCTAATATGCGTCATCGCCCGATT 364455 || | || || | |||||| || ||| || ||||| || | || ||| Sbjct 359235 CAACAAGTACCCGGTGATTGAAGCTCGCAACAGC-----AACATGCGACACAGGCCAATT 359289 Query 364456 GGTCTTGGTGTACAG-GGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTC 364514 ||||||||||| ||| || || ||||||| ||| | || ||| |||| || || Sbjct 359290 GGTCTTGGTGT-CAGCGGTCTGGCTGACGCCTTTCTCGCTCTGCGCATGCCATTCGAGTC 359348 Query 364515 GCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGAC 364574 || |||||| |||| ||| || ||||||| || || ||||| |||||| | || Sbjct 359349 TAAGGAAGCTCGTCTTCTCAATCAGCAGATCTTCGAGACCATGTACCACGCCGCACTTAC 359408 Query 364575 TGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCT 364634 ||| || ||||| | || | | || ||| || || || || || | Sbjct 359409 TGCATCTTGTGACCTTGCTGAGAAGCTCGGTCCCTACGAGACCTACCCTGGCTCTCCCAT 359468 Query 364635 TTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTG 364694 || ||||| | |||| | || | ||| ||| || || ||| | ||| |||| Sbjct 359469 CTCACAGGGCGAGCTCCAATACGACATGTGGGGTGTGACACCCACTGACTTGTGGGACTG 359528 Query 364695 GGATACGCT-ACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCC---CTCGTTACAG 364750 ||| | || | | | | | || ||| ||| |||||||||| |||||| | Sbjct 359529 GGAAGCCCTCAAGGCGCGAATTGCAG-TGCACGGTGTTCGCAACTCCTTACTCGTT---G 359584 Query 364751 CGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGT 364810 | || ||||| || || || | |||||| | || |||||||||||| || |||| Sbjct 359585 CTCCTATGCCAACAGCGAGCACATCGCAGATCATGGGCTTCAACGAGTGCTTTGAGCCGT 359644 Query 364811 TTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGT 364870 || |||||| | || || || || || | ||||||| || | || || ||| | Sbjct 359645 ACACCAGCAATATCTACTCTCGTCGTGTCTTGGCCGGAGAGTTCCAAGTCGTCAATCCTT 359704 Query 364871 ACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCA 364930 || | ||||| || |||| || || ||| |||||| |||||||||| |||| Sbjct 359705 GGCTGCTTAAGGACCTCGTCGACATGGGTCTTTGGAGTGACAACATGAAGAACCGCATCA 359764 Query 364931 TCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTT 364990 | || | | |||||| | ||| |||||| |||| || || | ||| | | Sbjct 359765 TTGCAGATGGTGGTTCAATTCAGCGCATTCCCAACATTCCCGATGAAATCAAGGAGCTGT 359824 Query 364991 ACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTG 365050 |||| || || ||||| || | ||| | |||| | ||| | || ||||| || | Sbjct 359825 ACAAGACTGTCTGGGAGATCAGCCAGCGCAACATCATCCAGATGTCAGCAGATCGTGGCG 359884 Query 365051 CTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAAGC 365110 | || ||| |||| |||||| | ||| | ||||| ||||||| | |||| Sbjct 359885 CCTTCATCGATCAGTCCCAGTCACTCAACATCCACATGAAGGAGCCAACTATGGGCAAGA 359944 Query 365111 TTACATCCATGCATTTCTACGGGTGG 365136 | || || ||||| ||| ||| ||| Sbjct 359945 TCACGTCGATGCACTTCACCGGCTGG 359970 >seq198 Length=398492 Score = 293 bits (324), Expect = 6e-74 Identities = 1104/1707 (65%), Gaps = 45/1707 (3%) Strand=Plus/Plus Query 363454 CCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCGCG 363513 || ||||| ||| | |||||||| ||| | ||||| || || ||| ||||||| ||| Sbjct 354299 CCACAGCACATGATCATGCGTGTCGCTGTAGGTATACACGGCGAGGACATTGATGCGGCG 354358 Query 363514 ATTGAAACATATAAGCTTCTAAGTGCT-CGTGTATT-CACGCACGCCACGCCAACAATGT 363571 || || || || || || | | || | | ||||| ||| || || |||| || ||| Sbjct 354359 ATCGAGACGTACAA-CTAC-ATGTCCAACAAGTATTTCACACATGCTTCGCCGACGCTGT 354416 Query 363572 ACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACG 363631 || ||||| || | | | |||| | |||| ||||| || | | |||||||||| Sbjct 354417 TCAGCGCTGGCACACCTCAAGCACAACTTGCTTCATGCTTCCTGATCGACATGAAGGACG 354476 Query 363632 ATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAG 363691 | ||| ||||| || | ||||| || |||| |||||| | || || || || || | Sbjct 354477 ACAGCATTGAGGGCATTTACGACACGCTGAAGACTTGTGCGATGATCTCGAAAAACGCCG 354536 Query 363692 GCGGAATTGGTGTATCGATCCACAATG--TTCGTGC-ACAGAACAGTTACATTCGCGGCA 363748 | || || || | | | |||| | |||| || || | || ||||| || | Sbjct 354537 GTGGCATCGGACT--CAACGCACATCGCATTCGGGCGACTGGCTCGT-ACATTGCGGGTA 354593 Query 363749 CAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGT 363808 || || || || || || || |||||||| || ||||| |||| ||||| |||| Sbjct 354594 CAAATGGCACATCAAACGGTCTCGTACCCATGCTACGGGTGTTCAACAACACTGCTAGGT 354653 Query 363809 ACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATC 363868 | |||||||||||||| ||||| || || || || || || |||||||| | Sbjct 354654 ATGTCGACCAGGGTGGCAACAAGCGACCCGGCGCATTCGCCATCTACCTCGAGCCGTGGC 354713 Query 363869 ATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTG 363928 | || || || || || ||||| || || || ||| || || ||||| | || | Sbjct 354714 ACGCAGACATCTTGTCCTTCCTTGACCTGCGCAAGAACCACGGCAAGGAGGAGGTCCGCG 354773 Query 363929 CACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAG 363988 | ||||| ||||||| || || ||| | |||| | || |||||||| ||| | || Sbjct 354774 CTCGTGACTTGTTCTACGCTCTGTGGATCCCTGATCTCTTCATGAAGCGTGTGCA---AG 354830 Query 363989 GTAAGA---ATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGG 364045 ||| ||||| |||| | ||||| |||| || || || ||| ||||||| | | Sbjct 354831 ATAACGCTGATTGGACACTGATGTGCCCGAACGAGTGCCCCGGCCTTGCCGATGTGTACG 354890 Query 364046 GTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAA 364105 | || || | | || || ||| | ||| ||| || || |||| || |||| | Sbjct 354891 GGGATGAGTTCGAAGCGCTCTACACACGGTACGAAAGCGAAGGCAAGG---GTGAGACTA 354947 Query 364106 TTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCT 364165 | | ||| |||||| | |||| |||||| | || | |||| ||||| || | || | Sbjct 354948 TGCGCGCCCAGAAGATTTGGTATGCCATTCTCGAGGCTCAGACCGAGACTGGCAACCCGT 355007 Query 364166 ATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTC 364225 | ||| |||||||||| | |||||||||| ||||||| || || | || ||||||| Sbjct 355008 ACATGCTGTACAAAGACGCTGCCAACCGCAAGAGCAACCAGAAGAACTTGGGCACAATTC 355067 Query 364226 AGCAGAGC-AACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTA 364284 |||| | ||| | || |||||||| || || ||||||||||| ||||| || || Sbjct 355068 -GCAGCTCCAACTTGTGCACCGAGATCATCGAGTACACCGCTCCTGACGAAGTAGCTGTG 355126 Query 364285 TGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAA-----AGATG-GTACTTTTGAC 364338 || |||||||| || | || || || | | || | ||| | || | ||| Sbjct 355127 TGCAACCTTGCATCTCTGGCTCTGCCTACATACGTCGACATTCAGAAGCAGACCTACGAC 355186 Query 364339 CACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGAC 364398 | || | | | || || || | | ||| |||| | ||||| | ||||| Sbjct 355187 TTCAAGAAGTTGCACGAGGTCACACAAGTAGTCACTCGCAACTTGAACAAGATCATCGAA 355246 Query 364399 AAGAATTATTATCCAATTCCTGAAGC-CG----AGCGTTCTAATATGCGTCATCGCCCGA 364453 || | || ||| | |||||| || ||| || ||||| || | || | Sbjct 355247 GTTAACAAGTACCCAGTGATTGAAGCTCGCAACAGC-----AACATGCGACACAGGCCAA 355301 Query 364454 TTGGTCTTGGTGTACAG-GGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGAT 364512 | ||||| ||||| ||| || || ||||||| || | || ||| |||| || Sbjct 355302 TCGGTCTGGGTGT-CAGCGGTCTGGCTGACGCCTTCCTCTCTCTGCGCATGCCATTCGAG 355360 Query 364513 TCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATG 364572 ||| || |||||| | || ||| || ||||||| || || || || |||||| || Sbjct 355361 TCGAAGGAAGCTCGTCTCCTCAATCAGCAGATCTTCGAGACCATCTACCACGCCGCACTG 355420 Query 364573 ACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCT 364632 || || || || ||| | || | | || ||| ||||| || ||||| Sbjct 355421 ACAGCATCTTGCGATCTCGCTGAGAAGCTTGGCCCTTACGAGACTTACCCTGGCTCCCCC 355480 Query 364633 CTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAAC 364692 |||| ||||| | |||| | || | ||| ||| || || ||| | ||| | Sbjct 355481 ATTTCACAGGGCGAGCTCCAATACGACATGTGGGGTGTGACACCCACTGACTTGTGGGAT 355540 Query 364693 TGGGATACGCT--ACGTTC-CAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACA 364749 ||||| | || | | | | || || |||||| |||||||| || | Sbjct 355541 TGGGAAGCCCTCAAGGCGCGGATCG--CAG-TGCATGGCGTCCGCAACTCTCTGCTCGTC 355597 Query 364750 GCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCG 364809 ||||| |||||||| || || | |||||| | || ||| |||||||| || ||| Sbjct 355598 GCGCCTATGCCCACAGCAAGCACATCGCAGATCATGGGGTTCAATGAGTGCTTTGAGCCG 355657 Query 364810 TTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAG 364869 | || ||||| | || || || || || || |||| || || | || || || Sbjct 355658 TACACCAGCAACATCTACTCTCGTCGTGTCCTGGCCGGCGAGTTCCAAGTCGTCAACCCC 355717 Query 364870 TACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATC 364929 | || ||||||| ||| |||| || || ||| | |||| |||||||||| ||| Sbjct 355718 TGGCTGCTCAAGGACCTTGTCGACATGGGCCTCTGGAGCGACAACATGAAGAACCGCATC 355777 Query 364930 ATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATT 364989 ||||| | | ||| ||| | ||| |||||| | || || || | ||| | Sbjct 355778 ATCGCAGATGGTGGCTCTATCCAGCGCATTCCCAATATCCCCGACGAGATCAAGGAGCTG 355837 Query 364990 TACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGT 365049 || || || || ||||| || | ||| | |||| | ||| | |||||||| || Sbjct 355838 TATAAGACTGTCTGGGAGATCAGCCAGCGCAACATCATCCAGATGTCAGCCGATCGTGGC 355897 Query 365050 GCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAAG 365109 || || ||| |||| ||| ||| | ||| | ||||| |||| || | |||| Sbjct 355898 GCCTTCATCGATCAGTCCCAATCGCTGAACATCCACATGAAGGAGCCGACGATGGGCAAG 355957 Query 365110 CTTACATCCATGCATTTCTACGGGTGG 365136 | || |||||||| ||| ||| ||| Sbjct 355958 ATCACGTCCATGCACTTCACCGGCTGG 355984 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303349141308794