Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rachicladosporium_20antarcticum_20[genbank_20GCA_5F002077065.1_20201 7-04-03] 267 sequences; 47,410,550 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq184 91.5 1e-13 seq228 87.8 2e-12 >seq184 Length=1511567 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 24000 TTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATC 24059 || || ||||| || || || || | || ||| | || || ||| | |||||||||| Sbjct 736146 TTCGTCAAAACCTTGACCGGCAAGACCATCACCCTTGAGGTGGAGAGCTCCGACACCATC 736087 Query 24060 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTG 24119 || | ||||| ||||| ||||| || ||||| ||||| || || ||| | || Sbjct 736086 GACAATGTCAAGAGCAAGATCCAAGACAAGGAGGGCATTCCTCCAGACCAGCAGCGCTTG 736027 Query 24120 ATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAA 24179 || | || ||||||||| ||||| |||| | | | | || ||| || ||||| || ||| Sbjct 736026 ATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTACAACATCCAGAAA 735967 Query 24180 GAATCTACAATTCAT 24194 || || || ||||| Sbjct 735966 GAGTCCACCCTTCAT 735952 >seq228 Length=1254254 Score = 87.8 bits (96), Expect = 2e-12 Identities = 132/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 24000 TTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATC 24059 || ||||| || || || || || | || ||| | || || ||| | |||||||||| Sbjct 556231 TTCGTAAAGACCTTGACCGGCAAGACCATCACCCTTGAGGTGGAGAGCTCCGACACCATC 556172 Query 24060 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTG 24119 || | ||||| ||||| |||||||| ||||| || || || || ||| | || Sbjct 556171 GACAATGTCAAGAGCAAGATCCAAGACAAAGAGGGCATCCCGCCAGACCAGCAGCGCTTG 556112 Query 24120 ATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAA 24179 || | || ||||||||| ||||| |||| | | | | || |||||| ||||| || || Sbjct 556111 ATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGATTACAACATCCAGAAG 556052 Query 24180 GAATCTAC 24187 || || || Sbjct 556051 GAGTCCAC 556044 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429934600961385