Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rachicladosporium_20antarcticum_20[genbank_20GCA_5F002077065.1_20201 7-04-03] 267 sequences; 47,410,550 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq112 163 3e-35 seq1 163 3e-35 seq228 127 2e-24 seq184 114 1e-20 seq193 111 1e-19 seq207 105 6e-18 seq204 87.8 2e-12 >seq112 Length=1778705 Score = 163 bits (180), Expect = 3e-35 Identities = 347/514 (68%), Gaps = 7/514 (1%) Strand=Plus/Plus Query 46084 ATGCCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCG 46143 || || ||| | |||||||| | ||||||| | |||||||||| | | | | || Sbjct 1416641 ATCCCCTGCATCCGCAAGAAGGCTAACTGGGCACTAAAGTGGATCAGCGACGACGCATCG 1416700 Query 46144 ACTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGT 46203 || |||| | ||| | | ||||| || ||| ||||| |||| || || ||| Sbjct 1416701 ACCTTCGGCTGCCGTCTTATCGCCTTCGCAGCTGTTGAGGGTATCTTCTTCTCCGGCTCC 1416760 Query 46204 TTTGCCGCCATCTTTTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAAC 46263 || || |||||||| | |||| | ||| ||||||||||||| ||||| || Sbjct 1416761 TTCGCTGCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCTCACGTTCTCTAAT 1416820 Query 46264 GAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCT-CTACTATAACAC 46322 ||||| || ||||| ||||||||| |||| || |||||||| || | || | || | Sbjct 1416821 GAGCTCATCTCGCGTGACGAGGGCATGCACACCGACTTTGCCTGCATGCTGC----ACGC 1416876 Query 46323 TCGCGTGCACGACAAGCTTGCGCCCGACACCGTGCTGAGCATGTTCAAGGAGGCGGTGGC 46382 | | | | |||||| | | |||| ||| | || ||| ||||| || | Sbjct 1416877 ACATCTCCGCAACAAGCCATCACTCGACCTCGTCCACCAGATCATCACCGAGGCCGTCGA 1416936 Query 46383 CATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCACA 46442 || ||| | ||||| | ||| ||| |||||| || || || ||||||||||| | Sbjct 1416937 GATCGAGCAAGAGTTCCTATCGGACGCCCTGCCCTGCGCACTTCTCGGCATGAACGCCAA 1416996 Query 46443 GTCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGT-GCAGCTTCACCAGC 46501 | |||||| | |||||||||||||| || ||||| || ||| | ||| || ||| Sbjct 1416997 GCTCATGTGCCAGTACATCGAGTTTGTCGCTGACCGTCTACTCCTCGCA-CTCGGCCACA 1417055 Query 46502 CGAAGCATTTTCACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCA 46561 ||| | | | || ||| || || || || ||| | ||||||||||| | |||| Sbjct 1417056 GCAAGTACTACAATGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGCCGGCA 1417115 Query 46562 AAACTAATTTTTTCGAAAAGCGCGTCGGCGAGTA 46595 | || || || ||||| |||||||| || || || Sbjct 1417116 AGACAAACTTCTTCGAGAAGCGCGTAGGTGACTA 1417149 >seq1 Length=1805414 Score = 163 bits (180), Expect = 3e-35 Identities = 350/516 (68%), Gaps = 9/516 (2%) Strand=Plus/Plus Query 46083 TATGCCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGC 46142 ||| |||||| | |||||||| || ||||||| | |||||||||| | | | | | Sbjct 289715 TATCCCGTGCATCCGCAAGAAGGCCAACTGGGCACTAAAGTGGATCAGCGACGACGCATC 289774 Query 46143 GACTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAG 46202 ||| |||| | ||| | | ||||| || ||| |||||| | || || ||||| Sbjct 289775 GACCTTCGGCTGCCGTCTCATCGCCTTCGCAGCTGTCGAGGGCATTTTCTTCTCTGGTTC 289834 Query 46203 TTTTGCCGCCATCTTTTACATCAA-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGCA 46261 || ||||| ||||| | |||| || | |||| | ||||||||||| || || || Sbjct 289835 GTTCGCCGCTATCTTCTGGCTCAAGAAGCGCGGGC-TGATGCCCGGCCTCACCTTCTCCA 289893 Query 46262 ACGAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCT-CTACTATAAC 46320 ||||||| || || || ||||||||| |||| || ||||| || ||| | || | || Sbjct 289894 ACGAGCTCATTTCCCGTGACGAGGGCATGCACACCGACTTCGCCTGTATGCTGC----AC 289949 Query 46321 ACTCGCGTGCACGACAAGCTTGCGCCCGACACCGTGCTGAGCATGTTCAAGGAGGCGGTG 46380 | | | | | |||||| | | |||| || | || ||| ||| || || Sbjct 289950 GCACATCTCCGCAACAAGCCATCACTCGACCTTGTCCACCAGATCATCACGGAAGCTGTC 290009 Query 46381 GCCATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCA 46440 | || ||| | ||||| || | | ||| || ||| || || || ||||||||||| Sbjct 290010 GAGATCGAGCAAGAGTTCCTTTCAGACGCCCTACCCTGCGCACTTCTCGGCATGAACGCC 290069 Query 46441 CAGTCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGT-GCAGCTTCACCA 46499 || |||||| | ||||||||||| || || ||||| || ||| | ||| || ||| Sbjct 290070 AAGCTCATGTGCCAGTACATCGAGTTCGTCGCTGACCGCCTACTCCTCGCA-CTCGGCCA 290128 Query 46500 GCCGAAGCATTTTCACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGG 46559 ||| | | |||| ||| || || || || ||| | ||||||||||| | || Sbjct 290129 CAGCAAGTACTACAACGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGCCGG 290188 Query 46560 CAAAACTAATTTTTTCGAAAAGCGCGTCGGCGAGTA 46595 ||| || || || ||||| |||||||| || || || Sbjct 290189 CAAGACGAACTTCTTCGAGAAGCGCGTAGGTGACTA 290224 >seq228 Length=1254254 Score = 127 bits (140), Expect = 2e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| || || | ||| | ||| |||||||| || |||||||||||| Sbjct 556014 CCACCACGCAGACGGAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGAG 556073 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| ||||||||||| ||| |||| || ||||||||||| || ||| Sbjct 556074 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGCGGG 556133 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || |||||||| ||| || ||||| | || | || |||| | ||| | Sbjct 556134 ATGCCCTCTTTGTCTTGGATCTTGCTCTTGACATTGTCGATGGTGTCGGAGCTCTCCACC 556193 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAA 131225 || | ||| | ||| || ||||| | || |||||||| Sbjct 556194 TCAAGGGTGATGGTCTTGCCGGTCAAGGTCTTTACGAA 556231 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || |||||||||||||| || || | ||||||||||| ||||||||||| |||||| Sbjct 555558 CCTCCACGCAAACGCAGCACCAAGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCGCTC 555617 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || |||||| | |||||| || ||| |||| | ||||||||| || || ||| Sbjct 555618 AACGTCCGGCCGTCCTCCAACTGCTTACCAGCGAAGATAAGACGCTGCTGATCTGGTGGG 555677 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || || || || ||| ||| | | || | || || | || || | Sbjct 555678 ATACCCTCCTTATCCTGAATCTTCGACTTCACGTTGTCGATTGTGTCTGATGATTCCACC 555737 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | ||| || || || ||||| || ||||| || ||||| Sbjct 555738 TCGAGCGTGATGGTCTTGCCTGTGAGAGTCTTGACGAAGATTTGCAT 555784 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | || || || | || | ||||| ||||| || |||||||| ||| Sbjct 555786 CCACCGCGGAGGCGAAGGACGAGGTGGAGAGTCGATTCCTTCTGGATGTTGTAGTCGGAA 555845 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || |||||| ||||||||||| ||| |||| | ||||||||||| ||||| Sbjct 555846 AGAGTACGACCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCTGGAGGA 555905 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || || || ||| ||| ||| | | || | || |||| |||||| | Sbjct 555906 ATACCCTCCTTATCCTGGATCTTCGACTTCACGTTGTCGATGGTGTCGGAGGACTCAACC 555965 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||| | ||| || || || || || || ||||| |||||||| Sbjct 555966 TCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 556012 Score = 102 bits (112), Expect = 8e-17 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||||| || | || | ||||||||||| || |||||||| ||| Sbjct 1165073 CCACCACGGAGGCGCAGGACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAA 1165014 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| ||||||||||| ||| |||| || ||||||||||| || ||| Sbjct 1165013 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCAGGTGGG 1164954 Query 131128 ATTCCTTCTTTGTC 131141 || || || ||||| Sbjct 1164953 ATACCCTCCTTGTC 1164940 >seq184 Length=1511567 Score = 114 bits (126), Expect = 1e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| || || | ||| | ||| ||||| || || |||||||| ||| Sbjct 735929 CCACCACGCAGACGGAGGACGAGATGAAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAG 735988 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| ||||||||||| ||| |||| || ||||||||||| ||||| Sbjct 735989 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGAGGA 736048 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || |||| | ||| | Sbjct 736049 ATGCCCTCCTTGTCTTGGATCTTGCTCTTGACATTGTCGATGGTGTCGGAGCTCTCCACC 736108 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAA 131225 || | ||| | ||| || ||||| | ||||| ||||| Sbjct 736109 TCAAGGGTGATGGTCTTGCCGGTCAAGGTTTTGACGAA 736146 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || |||| ||| ||||| || || | ||||||||||| || |||||||| |||||| Sbjct 735473 CCTCCACGCAGACGTAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 735532 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || | |||||| | |||||| || ||| |||| | |||||||||||| || ||| Sbjct 735533 AAAGTCCTGCCGTCCTCCAACTGCTTCCCGGCGAAGATGAGACGCTGCTGGTCTGGTGGG 735592 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || || || || ||| ||| | | || | || || | || || | Sbjct 735593 ATACCCTCCTTATCCTGAATCTTCGACTTCACGTTGTCGATCGTGTCTGATGATTCCACC 735652 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | ||| || || || ||||| || |||||||| ||||| Sbjct 735653 TCGAGCGTGATGGTCTTGCCTGTGAGAGTCTTGACGAAAATTTGCAT 735699 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | || || || | || | ||||||||||| || ||||| || ||| Sbjct 735701 CCACCGCGGAGGCGAAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTATAGTCGGAA 735760 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| |||||| || |||||||| ||| | || | ||||| ||||| ||||| Sbjct 735761 AGAGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAAATGAGGCGCTGTTGGTCTGGAGGA 735820 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| ||| ||||| | || | || |||| ||||| | Sbjct 735821 ATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCGGATGACTCAACC 735880 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||| | ||| || ||||| || || || ||||| |||||||| Sbjct 735881 TCGAGGGTGATGGTCTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 735927 >seq193 Length=432561 Score = 111 bits (122), Expect = 1e-19 Identities = 105/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||||| ||||| || | ||||||||| || || |||||||| ||| Sbjct 90586 CCACCACGGAGGCGCAGGACTAAGTGAAGGGTCGACTCTTTCTGGATGTTGTAGTCGGAG 90645 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| ||||||||||| ||| |||| || ||||||||||| || ||| Sbjct 90646 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCAGGTGGG 90705 Query 131128 ATTCCTTCTTTGTC 131141 || || || ||||| Sbjct 90706 ATACCCTCCTTGTC 90719 >seq207 Length=296016 Score = 105 bits (116), Expect = 6e-18 Identities = 132/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| || |||||||||||||||| || | | ||||| |||||||| || ||| | | Sbjct 212925 CCTTCTGGATGTTGTAATCGCTCAGTGTCCTCCCATCCTCAAGCTGCTTTCCGGCGAAAA 212984 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | || ||||||||||| || |||||||| || ||||| ||| || ||||| | | Sbjct 212985 TCAACCGCTGCTGGTCTGGCGGGATTCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGT 213044 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | || || | |||||||| |||| ||| | ||| || || || || || || |||| Sbjct 213045 CGATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 213104 Query 131225 A 131225 | Sbjct 213105 A 213105 >seq204 Length=319970 Score = 87.8 bits (96), Expect = 2e-12 Identities = 130/182 (71%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGC-GCGAGTCCTCTAGCTGCTTGCCTGCGTAG 131103 |||| || ||||||||||| |||| || | || | ||||| |||||||| || ||| | Sbjct 82046 CCTTCTGGATGTTGTAATCACTCAGTGTCCTGCCA-TCCTCAAGCTGCTTTCCGGCGAAA 81988 Query 131104 ATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGC 131163 || || ||||||||||| || |||||||| || ||||| ||| || ||||| | Sbjct 81987 ATCAAGCGCTGCTGGTCTGGCGGGATTCCCTCCTTGTCCTGGATCTTGCTCTTGACATTG 81928 Query 131164 TCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACG 131223 || | || |||| ||||| | || | ||| | || || || || || || || ||| Sbjct 81927 TCGATCGTGTCGGACGACTCCACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACG 81868 Query 131224 AA 131225 || Sbjct 81867 AA 81866 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472011224657280