Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20antarcticum_20[genbank_20GCA_5F002077065.1_20201
7-04-03] 267 sequences; 47,410,550 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq1 129 1e-24
seq112 120 6e-22
seq182 96.9 7e-15
>seq1
Length=1805414
Score = 129 bits (142), Expect = 1e-24
Identities = 270/400 (68%), Gaps = 2/400 (1%)
Strand=Plus/Minus
Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622
|||||||| || | |||||| | || ||||| ||||||||||||||||||||| |||
Sbjct 290206 TCGAAGAAGTTCGTCTTGCCGGCGAGGGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTG 290147
Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682
|| ||||| | |||| ||||| ||||| | || | |||||| || || ||||| |
Sbjct 290146 GCGTTGTAGTACTTGCTGTGGCCGAGTGCGAGGAGTAGGCGGTCAGCGACGAACTCGATG 290087
Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCA-TACGACAAGGAATTGCCTCACAGAT 251741
||||| | ||| || | | ||||||||| | | | || || || | || || | |
Sbjct 290086 TACTGGCACATGAGCTTGGCGTTCATGCCGAGAAGTGCG-CAGGGTAGGGCGTCTGAAAG 290028
Query 251742 GAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTGTGCCAGAGACAG 251801
||| || | ||| | | || || ||| | || | || | | || || |
Sbjct 290027 GAACTCTTGCTCGATCTCGACAGCTTCCGTGATGATCTGGTGGACAAGGTCGAGTGATGG 289968
Query 251802 CTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTCGCG 251861
|||||| || | || || ||| | | | || | ||||| |||||||| ||
Sbjct 289967 CTTGTTGCGGAGATGTGCGTGCAGCATACAGGCGAAGTCGGTGTGCATGCCCTCGTCACG 289908
Query 251862 ACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCAGAA 251921
|||| ||||||||| | ||||| ||||||| ||| || ||| ||||||||||
Sbjct 289907 GGAAATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATCAGCCCGCGCTTCTTGAGCCAGAA 289848
Query 251922 GATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACA 251961
||| ||| || || |||||||| | | |||||||||
Sbjct 289847 GATAGCGGCGAACGAACCAGAGAAGAAAATGCCCTCGACA 289808
>seq112
Length=1778705
Score = 120 bits (132), Expect = 6e-22
Identities = 268/400 (67%), Gaps = 2/400 (1%)
Strand=Plus/Minus
Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622
|||||||| || | |||||| | || ||||| ||||||||||||||||||||| |||
Sbjct 1417131 TCGAAGAAGTTTGTCTTGCCGGCGAGGGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTG 1417072
Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682
|||||||| | |||| ||||| ||||| | || | ||||| || |||||||| |
Sbjct 1417071 GCATTGTAGTACTTGCTGTGGCCGAGTGCGAGGAGTAGACGGTCAGCGACAAACTCGATG 1417012
Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCA-TACGACAAGGAATTGCCTCACAGAT 251741
||||| | ||| || | | ||||||||| | | | || || || | || || | |
Sbjct 1417011 TACTGGCACATGAGCTTGGCGTTCATGCCGAGAAGTGCG-CAGGGCAGGGCGTCCGATAG 1416953
Query 251742 GAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTGTGCCAGAGACAG 251801
||| || | ||| | | || ||||| | || | || | | || || |
Sbjct 1416952 GAACTCTTGCTCGATCTCGACGGCCTCGGTGATGATCTGGTGGACGAGGTCGAGTGATGG 1416893
Query 251802 CTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTCGCG 251861
|||||| || | || || ||| | | |||| | ||||| |||||||| ||
Sbjct 1416892 CTTGTTGCGGAGATGTGCGTGCAGCATGCAGGCAAAGTCGGTGTGCATGCCCTCGTCACG 1416833
Query 251862 ACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCAGAA 251921
||||| ||| || || | ||||| ||||| | || || ||| ||||||||||
Sbjct 1416832 CGAGATGAGCTCATTAGAGAACGTGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAGAA 1416773
Query 251922 GATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACA 251961
||| || ||||| || ||||| | | |||||| |||
Sbjct 1416772 GATGGCAGCGAAGGAGCCGGAGAAGAAGATACCCTCAACA 1416733
>seq182
Length=708831
Score = 96.9 bits (106), Expect = 7e-15
Identities = 114/152 (75%), Gaps = 2/152 (1%)
Strand=Plus/Minus
Query 280672 CCAAGCTGGGTCTGGACCCCGAGTTTACAACTCACTCTCGCATTCGCGGTCTTTCTGGAG 280731
|||| | ||| | ||| ||||| || ||||||| ||||| ||||| || || || |
Sbjct 213684 CCAACTTCGGTATCGACACCGAGCTTGTTTCTCACTCCCGCATGCGCGGCCTCTCCGGTG 213625
Query 280732 GCCAGAAGGTCAAACTTGTCATCGGAGCA-GCTCTGTGGCAACACCCTCACGTGATCGTT 280790
||||| ||||| | || ||| || |||| ||||| | ||||||| |||||||
Sbjct 213624 GCCAGCGTGTCAAGGTCGTTCTCGCCGCCTGCTCA-TGGCAGCGCCCTCACTTGATCGTG 213566
Query 280791 CTCGACGAGCCTACCAACTATCTGGACCGCGA 280822
||||||||||| |||||||| || ||||||||
Sbjct 213565 CTCGACGAGCCGACCAACTACCTCGACCGCGA 213534
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027833283834547
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |