Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20antarcticum_20[genbank_20GCA_5F002077065.1_20201
7-04-03] 267 sequences; 47,410,550 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq1 147 5e-30
seq112 131 4e-25
>seq1
Length=1805414
Score = 147 bits (162), Expect = 5e-30
Identities = 311/460 (68%), Gaps = 8/460 (2%)
Strand=Plus/Plus
Query 243298 CGTCTCGTCGCCTGGGTGTGCGTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCGCCATC 243357
|||||| |||||| | || || || ||| | || || || ||| ||| |||
Sbjct 289788 CGTCTCATCGCCTTCGCAGCTGTCGAGGGCATTTTCTTCTCTGGTTCGTTCGCCGCTATC 289847
Query 243358 TTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCATCAGT 243417
|| ||||| ||| || ||||||| |||||| | || |||||| ||||
Sbjct 289848 TTCTGGCTCAAGAAGCGCGGGCTGATGCCCGGCCTCACCTTCTCCAACGAGCTCATTTCC 289907
Query 243418 CGCGACGAGGGCCTTCACCAACAGTTCG---GTGAGCTTATGTATTCAAAGCTCCAGAAC 243474
|| ||||||||| | ||| | |||| || ||| | | || | |||| |||
Sbjct 289908 CGTGACGAGGGCATGCACACCGACTTCGCCTGTATGCT---GCACGCACATCTCCGCAAC 289964
Query 243475 AAGCTACCATTCGAAACGGTCAAACAAATCATCACAGAAGCAGTTGAAAACGAAAAGGAA 243534
|||| | || |||| ||| | || |||||||| ||||| || || | ||| | ||
Sbjct 289965 AAGCCATCACTCGACCTTGTCCACCAGATCATCACGGAAGCTGTCGAGATCGAGCAAGAG 290024
Query 243535 TTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTCATGGGACAG 243594
||| ||| ||||| | || ||| ||| | ||||||||| | | |||||| | |||
Sbjct 290025 TTCCTTTCAGACGCCCTACCCTGCGCACTTCTCGGCATGAACGCCAAGCTCATGTGCCAG 290084
Query 243595 TACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGT-GTACAA 243653
|||||||| ||||| || |||||| | || |||| || || | || |||| |||||
Sbjct 290085 TACATCGAGTTCGTCGCTGACCGCCTACTCCTCGCACTCGGCCA-CAGCAAGTACTACAA 290143
Query 243654 CTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTT 243713
| ||| |||||||| | ||| |||||| ||| || || || || || ||||||||
Sbjct 290144 CGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGCCGGCAAGACGAACTTCTT 290203
Query 243714 CGAAAAGCGTGTCAGTGATTATCAACGCCCTGGTGTGATG 243753
||| ||||| || |||| || || ||||||| |||
Sbjct 290204 CGAGAAGCGCGTAGGTGACTACCAGAAGGCTGGTGTCATG 290243
>seq112
Length=1778705
Score = 131 bits (144), Expect = 4e-25
Identities = 292/436 (67%), Gaps = 2/436 (0%)
Strand=Plus/Plus
Query 243319 GTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCGCCATCTTTTGGCTGCGGAACAAAGGT 243378
||||| ||||| | || ||||| ||| |||||||| ||||| ||| ||
Sbjct 1416734 GTTGAGGGTATCTTCTTCTCCGGCTCCTTCGCTGCCATCTTCTGGCTCAAGAAGCGCGGC 1416793
Query 243379 GTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCATCAGTCGCGACGAGGGCCTTCACCAA 243438
| ||||| |||||| | ||||| ||| ||||| || ||||||||| | |||
Sbjct 1416794 CTCATGCCCGGCCTCACGTTCTCTAATGAGCTCATCTCGCGTGACGAGGGCATGCACACC 1416853
Query 243439 CAGTTCGGTGAGCTTATGTATTCAAAGCTCCAGAACAAGCTACCATTCGAAACGGTCAAA 243498
| || | | || | || | |||| ||||||| | || |||| ||| |
Sbjct 1416854 GACTTTGCCTGCATGCTGCACGCACATCTCCGCAACAAGCCATCACTCGACCTCGTCCAC 1416913
Query 243499 CAAATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGC 243558
|| |||||||| || || || || | ||| | || ||| | | ||||| | || |||
Sbjct 1416914 CAGATCATCACCGAGGCCGTCGAGATCGAGCAAGAGTTCCTATCGGACGCCCTGCCCTGC 1416973
Query 243559 CGGCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGC 243618
||| | ||||||||| | | |||||| | ||||||||||| || || || |||||
Sbjct 1416974 GCACTTCTCGGCATGAACGCCAAGCTCATGTGCCAGTACATCGAGTTTGTCGCTGACCGT 1417033
Query 243619 ATTTTCATCGCGCTTGGTTATGAGAAAGT-GTACAACTCCAAGAACCCCTTTGCCTTTAT 243677
| || |||| || || | || |||| ||||| ||| |||||||| | ||| ||
Sbjct 1417034 CTACTCCTCGCACTCGGCCA-CAGCAAGTACTACAATGCCACCAACCCCTTCGACTTCAT 1417092
Query 243678 GGAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCA 243737
|||| ||| || || || || || ||||||||||| ||||| || |||| || ||
Sbjct 1417093 GGAGAACATCTCCCTCGCCGGCAAGACAAACTTCTTCGAGAAGCGCGTAGGTGACTACCA 1417152
Query 243738 ACGCCCTGGTGTGATG 243753
| ||||||| |||
Sbjct 1417153 AAAGGCTGGTGTCATG 1417168
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102876227116450
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |