Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rachicladosporium_20antarcticum_20[genbank_20GCA_5F002077065.1_20201 7-04-03] 267 sequences; 47,410,550 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq198 159 4e-34 seq112 149 7e-31 seq1 123 3e-23 >seq198 Length=398492 Score = 159 bits (176), Expect = 4e-34 Identities = 572/879 (65%), Gaps = 44/879 (5%) Strand=Plus/Minus Query 114454 GACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGT 114513 ||| || |||| || || | || || || || ||||||| || || | | || Sbjct 355162 GACGTATGTAGGCAGAGCCAGAGATGCAAGGTTGCACACAGCTACTTCGTCAGGAGCGGT 355103 Query 114514 GTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATT 114573 |||||| || || || || ||||| || || || ||| |||||||||||||| || || Sbjct 355102 GTACTCGATGATCTCGGTGCACAAGTTGGAGCTGCGAATTGTGCCCAAGTTCTTCTGGTT 355043 Query 114574 TGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGA 114633 ||| ||| || || ||||| |||||||| || | || ||||| || || | Sbjct 355042 GCTCTTGCGGTTGGCAGCGTCTTTGTACAGCATGTACGGGTTGCCAGTCTCGGTCTGAGC 354983 Query 114634 CTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCT-CC 114691 || |||||| || | ||| | | || | ||| ||| ||| ||| ||| | || Sbjct 354982 CTCGAGAATGGCATACCAAATCTTCTG-GGCGCGCATAGT--------CTCACCCTTGCC 354932 Query 114692 TCC----TCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCC 114747 | | |||||| ||||||||| ||||| ||||| || || | || | || || Sbjct 354931 TTCGCTTTCGTACCGTGTGTAGAGCGCTTCGAACTCATCCCCGTACACATCGGCAAGGCC 354872 Query 114748 TGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAA 114807 || || | ||||| | || | ||| | | | || | |||||||||||||| Sbjct 354871 GGGGCACTCGTTCGGGCACATCAGTGTCCAATCAGCGTTATCTTGCACACGCTTCATGAA 354812 Query 114808 GAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTG 114867 ||| || |||||||| ||||| |||| | || ||| ||| | || || | || || Sbjct 354811 GAGATCAGGGATCCACAGAGCGTAGAACAAGTCACGAGCGCGGACCTCCTCCTTGCCGTG 354752 Query 114868 ATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGC 114927 || |||| || | ||| || ||| || ||||||||||| || ||||| | || Sbjct 354751 GTTCTTGCGCAGGTCAAGGAAGGACAAGATGTCTGCGTGCCACGGCTCGAGGTAGATGGC 354692 Query 114928 GATTGACCC------CTTACGACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAA 114981 || || || ||| | | ||| |||||| |||||||| || ||| || || Sbjct 354691 GAATGCGCCGGGTCGCTT--GTTG-CCACCCTGGTCGACATACCTAGCAGTGTTGTTGAA 354635 Query 114982 TACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAA--TACGAGAC 115039 || || ||||| || | || ||| | ||| ||||||||| ||| || |||||| | Sbjct 354634 CACCCGTAGCATGGGTACGAGACCGTTTGATGTGCCATTTGTACCCGCAATGTACGAGCC 354575 Query 115040 TTATTGGCTCTGACATCATG-GATGTGC----ATACCAATACCCCCTGCCCACTTTGAGA 115094 | | || | || ||| ||||||| | || || || || || || |||| Sbjct 354574 --AGTCGC-CCGA----ATGCGATGTGCGTTGAGTCCGATGCCACCGGCGTTTTTCGAGA 354522 Query 115095 TTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGA 115154 | ||| || | | || || |||| || || || || ||| |||| | ||| Sbjct 354521 TCATCGCACAAGTCTTCAGCGTGTCGTAAATGCCCTCAATGCTGTCGTCCTTCATGTCGA 354462 Query 115155 TAAGGAAGCAGCTCGACATTTGTGGCCTT--GGTGTACCAGCGTTGAAGAGGGTTGGTGT 115212 | |||||||| | | ||||| ||| ||||| |||||| |||| || || || | Sbjct 354461 TCAGGAAGCATGAAGCAAGTTGTG--CTTGAGGTGTGCCAGCGCTGAACAGCGTCGGCGA 354404 Query 115213 CGCGTGGATGAACATACCT-TGGGACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGT 115271 || || |||| |||| | | |||||| | | ||| ||||| | | || ||||| Sbjct 354403 AGCATGTGTGAA-ATACTTGTTGGACATGTAGTTGTACGTCTCGATCGCCGCATCAATGT 354345 Query 115272 CTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGT 115310 | || ||||| ||||| | | ||| ||||| | ||||| Sbjct 354344 CCTCGCCGTGTATACCTACAGCGACACGCATGATCATGT 354306 >seq112 Length=1778705 Score = 149 bits (164), Expect = 7e-31 Identities = 533/815 (65%), Gaps = 19/815 (2%) Strand=Plus/Minus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817 |||||| || || ||||||||||||||||||||||| ||| | | | ||| |||||||| Sbjct 1417150 GTAGTCACCTACGCGCTTCTCGAAGAAGTTTGTCTTGCCGGCGAGGGAGATGTTCTCCAT 1417091 Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCA--AATTGTTGGCACCCCAATCTGTTTGAGGAGA 125875 || || || ||||| | | || | | ||| || || | | | ||| ||| Sbjct 1417090 GAAGTCGAAGGGGTTGGTGGCATTGTAGTACTTGCTGTGGCCG-AGTGCGAG-GAGTAGA 1417033 Query 125876 CGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTA 125935 || || | ||| |||| ||||||| |||| || | |||||| |||| || Sbjct 1417032 CGGTCAGCGACAAACTCGATGTACTGGCACATGAGCTTGGCGTTCATGCCGAGAAGTGCG 1416973 Query 125936 CATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGCG 125995 || || || |||||| | | |||| | | ||| || || ||||| || | ||| | Sbjct 1416972 CAGGGCAGGGCGTCCGATAGGAACTCTTGCTCGATCTCGACGGCCTCGGTGATGATCTGG 1416913 Query 125996 TGAATGGTGTCCACCCCAGGTCTATTGCGCAAA-GT-CTTGAAGAGTTCCACGGCAAACT 126053 || | | ||| | || | ||||| | | || | || || | | |||||| | Sbjct 1416912 TGGACGAGGTCGAGTGATGGCTTGTTGCGGAGATGTGCGTGCAGCATGCA--GGCAAAGT 1416855 Query 126054 CTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGA 126113 | ||| | ||||||||||| |||||||| ||||| ||||| || || ||||||| Sbjct 1416854 CGGTGTGCATGCCCTCGTCACGCGAGATGAGCTCATTAGAGAACGTGAGGCCGGGCATGA 1416795 Query 126114 GACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCA 126173 | || |||||||| | |||||| || ||| || || || ||||||||||| ||||| | Sbjct 1416794 GGCCGCGCTTCTTGAGCCAGAAGATGGCAGCGAAGGAGCCGGAGAAGAAGATACCCTCAA 1416735 Query 126174 CACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGT-GTCAAACCACTTC 126232 || ||||| || | ||||| |||| | | || | | || | | |||||| Sbjct 1416734 CAGCTGCGAAGGCGATAAGACG-GCAGCCGAAGGTCGATGCGTCGTCGCTGATCCACTTT 1416676 Query 126233 ATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGA-GTTC 126291 | ||||| | ||||| || ||| || |||| | | | ||| || | |||| || Sbjct 1416675 AGTGCCCAGTTAGCCTTCTTGCGGATGCAGGGGATGTTGTCGATAGCGTTGAAGAGGTAT 1416616 Query 126292 CTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTG 126351 | | || || || || ||||||| | || |||||| ||| || || ||| ||| Sbjct 1416615 GTGCGTTGGCGA-GGTTCGCTGATGTAGGTGTCGATGAGTAGTGAGTAGGTCTCGGAGTG 1416557 Query 126352 GACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCT 126410 || | | ||| || | ||| | ||||||| |||| || ||| ||| || |||| Sbjct 1416556 GATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCAGCGAGCCTCGGGTATTTGCACCT 1416498 Query 126411 CATCGGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAAC 126469 | | | ||| | | | ||||| ||||| || || || | || || || Sbjct 1416497 C-GCCACTGAATCGCTCGACCAGGTTCTCGTTGACAATGCCGTCTGATGCGGCGAAGAAG 1416439 Query 126470 GCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCA 126526 || |||| || | ||||| | || | ||||| | | | |||||||||| Sbjct 1416438 GCAAGGACATGCGAAATGAAGAATCGCTCGTCATCGTTGAGACGCTTGTTCCAGTCGTGC 1416379 Query 126527 AGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561 || |||||||| ||||| | |||||| || ||||| Sbjct 1416378 AGGTCCTTCGACAGATCGATCTCCTCTGCTGTCCA 1416344 >seq1 Length=1805414 Score = 123 bits (136), Expect = 3e-23 Identities = 297/442 (67%), Gaps = 8/442 (2%) Strand=Plus/Minus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817 |||||| || || ||||||||||||||||| ||||| ||| | | | ||| |||||||| Sbjct 290225 GTAGTCACCTACGCGCTTCTCGAAGAAGTTCGTCTTGCCGGCGAGGGAGATGTTCTCCAT 290166 Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCA--AATTGTTGGCACCCCAATCTGTTTGAGGAGA 125875 || || || ||||| | | ||| | | ||| || || | | | ||| || Sbjct 290165 GAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTGCTGTGGCCG-AGTGCGAG-GAGTAGG 290108 Query 125876 CGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTA 125935 || || | |||| |||| ||||||| |||| || | |||||| |||| || Sbjct 290107 CGGTCAGCGACGAACTCGATGTACTGGCACATGAGCTTGGCGTTCATGCCGAGAAGTGCG 290048 Query 125936 CATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGCG 125995 || || || ||||| | | |||| | | ||| || || || |||||| | ||| | Sbjct 290047 CAGGGTAGGGCGTCTGAAAGGAACTCTTGCTCGATCTCGACAGCTTCCGTGATGATCTGG 289988 Query 125996 TGAATGGTGTCCACCCCAGGTCTATTGCGCAAA-GT-CTTGAAGAGTTCCACGGCAAACT 126053 || | ||| | || | ||||| | | || | || || | | ||| || | Sbjct 289987 TGGACAAGGTCGAGTGATGGCTTGTTGCGGAGATGTGCGTGCAGCATACA--GGCGAAGT 289930 Query 126054 CTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGA 126113 | ||| | |||||||||||||| ||||| || || |||||| || || ||||| | Sbjct 289929 CGGTGTGCATGCCCTCGTCACGGGAAATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATCA 289870 Query 126114 GACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCA 126173 | || |||||||| | |||||| || || || ||||| |||||||| || ||||| | Sbjct 289869 GCCCGCGCTTCTTGAGCCAGAAGATAGCGGCGAACGAACCAGAGAAGAAAATGCCCTCGA 289810 Query 126174 CACACGCGAACGCAAAGAGACG 126195 || ||||| || | |||||| Sbjct 289809 CAGCTGCGAAGGCGATGAGACG 289788 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597351606332360