Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rachicladosporium_20antarcticum_20[genbank_20GCA_5F002077065.1_20201 7-04-03] 267 sequences; 47,410,550 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq198 230 2e-55 seq176 185 9e-42 >seq198 Length=398492 Score = 230 bits (254), Expect = 2e-55 Identities = 611/921 (66%), Gaps = 17/921 (2%) Strand=Plus/Plus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | ||||| | |||||| || |||||| || || || ||| || || || Sbjct 354224 AACTACCAGTACTTCGGCTTCAAGACGCTGGAGCGCTCATATCTGCTCCGCATTGACGGG 354283 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | ||| | ||| | || || || || | ||||| ||||| | || || |||||| | Sbjct 354284 AAGGTGGCGGAGAGGCCACAGCACATGATCATGCGTGTCGCTGTAGGTATACACGGCGAG 354343 Query 93835 GACATGCCGAATGTTTTG--CGGG-CTTTCAGAGACATGCGGGACAAGAGGTATAC-CAT 93890 ||||| ||| | || | | | || ||||| ||||| | || ||| Sbjct 354344 GACATTG---ATGCGGCGATCGAGACGTACAACTACATGTCCAACAAGTATTTCACACAT 354400 Query 93891 GGCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCT 93950 | | | ||||| ||||||| ||| || || || |||| | |||| || ||||| Sbjct 354401 G-CTTCGCCGACGCTGTTCAGCGCTGGCACACCTCAAGCACAACTTGCTTCATGCTTCCT 354459 Query 93951 GAT-GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGA 94009 ||| ||| | |||| |||| ||| || |||| ||||| || ||| ||||||| Sbjct 354460 GATCGAC-ATGAAGGACGACAGCATTGAGGGCATTTACGACACGCTGAAGACTTGTGCGA 354518 Query 94010 CCATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTT 94069 ||||| ||| |||| || || ||||| ||| | || | | || || | || | Sbjct 354519 TGATCTCGAAAAACGCCGGTGGCATCGGACTCAACGCACATCGCATTCGGGCGACTGGCT 354578 Query 94070 CCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCA 94129 | ||||| ||||| |||||||| || ||||| ||||| || ||||| ||||| |||| Sbjct 354579 CGTACATTGCGGGTACAAATGGCACATCAAACGGTCTCGTACCCATGCTACGGGTGTTCA 354638 Query 94130 ACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCT 94189 ||||| | || | || || ||||||||||| | | | || | ||||| ||| Sbjct 354639 ACAACACTGCTAGGTATGTCGACCAGGGTGGCAACAAGCGACCCGGCGCATTCGCCATCT 354698 Query 94190 ATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCA 94249 | |||||||| |||||||| ||| | | | ||| | |||||||| ||||||||||||| Sbjct 354699 ACCTCGAGCCGTGGCACGCAGACATCTTGTCCTTCCTTGACCTGCGCAAGAACCACGGCA 354758 Query 94250 ACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGA 94309 | || || | || | ||| | ||||||||||| ||| | || || || || |||| Sbjct 354759 AGGAGGAGGTCCGCGCTCGTGACTTGTTCTACGCTCTGTGGATCCCTGATCTCTTCATGA 354818 Query 94310 AACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGT 94369 | || || | | ||| | | |||| || | || || || || || ||||| || Sbjct 354819 AGCGTGTGCAAGATAACGCTGATTGGACACTGATGTGCCCGAACGAGTGCCCCGGCCTTG 354878 Query 94370 CCGACGTTT--GTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAA 94427 |||| || | | |||| | | || |||| | || | || |||||| | ||||| Sbjct 354879 CCGATGTGTACGGGGAT-GAG-TTCGAAGCGCTCTACACACGGTACGAAAGCGAAGGCAA 354936 Query 94428 GGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGA 94487 || | || |||| || |||| | ||| || || | || | ||| || Sbjct 354937 GG---GTGAGACTATGCGCGCCCAGAAGATTTGGTATGCCATTCTCGAGGCTCAGACCGA 354993 Query 94488 GACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCA 94547 ||| || | || ||||| ||| ||| ||| ||| |||| |||| ||||||| || | Sbjct 354994 GACTGGCAACCCGTACATGCTGTACAAAGACGCTGCCAACCGCAAGAGCAACCAGAAGAA 355053 Query 94548 CCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGA 94607 | | || || ||||| || ||||||||||||| ||||||| || |||| || Sbjct 355054 CTTGGGCACAATTCGCAGCTCCAACTTGTGCACCGAGATCATCGAGTACACCGCTCCTGA 355113 Query 94608 CGAGATTGCTGTGTGTAACCT 94628 ||| | |||||||| ||||| Sbjct 355114 CGAAGTAGCTGTGTGCAACCT 355134 >seq176 Length=738521 Score = 185 bits (204), Expect = 9e-42 Identities = 601/925 (65%), Gaps = 25/925 (3%) Strand=Plus/Plus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | ||||||| |||||| || |||||| || || || ||| || || || Sbjct 358210 AACTACCAGTACTTTGGCTTCAAGACGCTGGAGCGCTCATATCTGCTCCGCATTGACGGA 358269 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | ||| | ||| | || || || || | ||||| || || | || || || ||| | Sbjct 358270 AAGGTCGCGGAGAGGCCACAGCACATGATCATGCGTGTGGCAGTGGGTATACATGGCGAA 358329 Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAG--------ACATGCGGGACAAGAGGTATA 93886 ||||| ||| ||||| || ||| ||||| ||||| | | Sbjct 358330 GACAT--CGA------TGCGGCGATTGAGACGTACAACTACATGTCCAACAAGTACTTCA 358381 Query 93887 C-CATGGCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGT 93945 | |||| | | || || ||||||| ||| || || || ||||| | | || || Sbjct 358382 CACATG-CTTCGCCAACGCTGTTCAGCGCTGGCACACCACAAGCACAGCTTGCCTCATGC 358440 Query 93946 TTCCTGAT-GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTG 94004 ||| |||| ||| | |||| ||| || || || | ||||| || ||| || Sbjct 358441 TTCTTGATCGAC-ATGAAGGACGATAGTATTGAGGGTATCTACGACACACTGAAGACTTG 358499 Query 94005 TGCGACCATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAG 94064 ||||| ||||| ||| |||| || || ||||| ||| | || | | || || | Sbjct 358500 TGCGATGATCTCGAAAAACGCCGGTGGCATCGGACTCAACGCACATCGCATTCGGGCGAC 358559 Query 94065 GGGTTCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGT 94124 || || ||||| ||||| || ||||| || ||||| ||||| || ||||| ||||| Sbjct 358560 TGGATCGTACATTGCGGGTACAAACGGCACATCGAACGGTCTCGTACCCATGCTACGGGT 358619 Query 94125 CTTCAACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGC 94184 ||||||||| |||| | || || |||||||| || | | | || | || || Sbjct 358620 GTTCAACAACACGGCTAGATATGTCGACCAGGGCGGCAACAAGCGTCCCGGCGCGTTTGC 358679 Query 94185 GGTCTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCA 94244 |||| || ||||| |||||||| ||| | | | ||| ||||||| || |||||||| Sbjct 358680 CATCTACCTTGAGCCATGGCACGCAGACATCTTGTCGTTCCTCGACCTCCGTAAGAACCA 358739 Query 94245 CGGCAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTT 94304 |||||| || || | || | ||||| |||||||| || ||| | || || || || Sbjct 358740 CGGCAAGGAGGAGGTTCGCGCTCGTGACCTGTTCTACGCACTGTGGATTCCCGATCTCTT 358799 Query 94305 TATGAAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGG 94364 |||||||| || | | ||| | | |||| | | || || || || |||||||| Sbjct 358800 CATGAAACGTGTGCAAGACAACGCTGATTGGACATTGATGTGCCCGAACGAGTGTCCCGG 358859 Query 94365 ACTGTCCGACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGA-ATCGCAGG 94423 || ||||||||| ||| ||||||| | || |||| ||||| | || | | Sbjct 358860 TCTTGCCGACGTTTACGGAGACGAATTTGAAGCGCTCTACACTCGATACGAGAGCG-AAG 358918 Query 94424 GCAAGGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGG 94483 |||||| | || |||| || ||| | ||| || || | || | ||| Sbjct 358919 GCAAGG---GTGAGACTATGCGCGCCCAGAAAATCTGGTATGCCATTCTTGAGGCTCAGA 358975 Query 94484 TGGAGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGC 94543 ||||| || | || ||||| ||| || ||| | | |||| |||| ||||||| Sbjct 358976 CCGAGACTGGCAACCCGTACATGCTGTATAAAGACGCCGCCAACCGCAAGAGCAACCAGA 359035 Query 94544 AGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTC 94603 | || | || || ||||| ||||||||||||||||| ||||||| || | | Sbjct 359036 AAAACTTGGGCACCATTCGCAGCTCCAATCTGTGCACCGAGATCATCGAGTACACCGCCC 359095 Query 94604 CGGACGAGATTGCTGTGTGTAACCT 94628 | || || | ||||| || || || Sbjct 359096 CAGATGAAGTGGCTGTATGCAATCT 359120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494721548861320