Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20antarcticum_20[genbank_20GCA_5F002077065.1_20201
7-04-03] 267 sequences; 47,410,550 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq112 140 4e-28
seq1 132 6e-26
seq198 131 2e-25
>seq112
Length=1778705
Score = 140 bits (154), Expect = 4e-28
Identities = 531/815 (65%), Gaps = 19/815 (2%)
Strand=Plus/Minus
Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290
|||||| || || ||||||||||||||||||||||| || ||||| ||| ||||||||
Sbjct 1417150 GTAGTCACCTACGCGCTTCTCGAAGAAGTTTGTCTTGCCGGCGAGGGAGATGTTCTCCAT 1417091
Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCA--AATTGTTGGCACCCCAATCTGTTTGAGGAGA 127348
|| || || ||||| | | || | | ||| || || | | | ||| |||
Sbjct 1417090 GAAGTCGAAGGGGTTGGTGGCATTGTAGTACTTGCTGTGGCCG-AGTGCGAG-GAGTAGA 1417033
Query 127349 CGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTA 127408
|| || | ||| |||| ||||||| |||| || | |||||| |||| ||
Sbjct 1417032 CGGTCAGCGACAAACTCGATGTACTGGCACATGAGCTTGGCGTTCATGCCGAGAAGTGCG 1416973
Query 127409 CATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCG 127468
|| || || |||||| | | |||| | | ||| || || || || || | ||| |
Sbjct 1416972 CAGGGCAGGGCGTCCGATAGGAACTCTTGCTCGATCTCGACGGCCTCGGTGATGATCTGG 1416913
Query 127469 TGAATAGTGTCCACCCCAGGTCTATTGCGTAAA-GT-CTTGAAGAGTTCCACAGCAAACT 127526
|| | ||| | || | ||||| | | || | || || | | ||||| |
Sbjct 1416912 TGGACGAGGTCGAGTGATGGCTTGTTGCGGAGATGTGCGTGCAGCATGCAG--GCAAAGT 1416855
Query 127527 CTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGA 127586
| ||| | ||||||||||| |||||||| ||||| ||||| || || |||||||
Sbjct 1416854 CGGTGTGCATGCCCTCGTCACGCGAGATGAGCTCATTAGAGAACGTGAGGCCGGGCATGA 1416795
Query 127587 GACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCA 127646
| || |||||||| | |||||| || ||| || ||||| ||||||||||| ||||| |
Sbjct 1416794 GGCCGCGCTTCTTGAGCCAGAAGATGGCAGCGAAGGAGCCGGAGAAGAAGATACCCTCAA 1416735
Query 127647 CACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATC-AAACCACTTC 127705
|| ||||| || | ||||| | | |||| || | | || | | ||||||
Sbjct 1416734 CAGCTGCGAAGGCGATAAGACGGCAGCCGAAGG-TCGATGCGTCGTCGCTGATCCACTTT 1416676
Query 127706 ATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGA-GTTC 127764
| ||||| | ||||| || ||| || |||| | | | ||| || | |||| ||
Sbjct 1416675 AGTGCCCAGTTAGCCTTCTTGCGGATGCAGGGGATGTTGTCGATAGCGTTGAAGAGGTAT 1416616
Query 127765 CTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTG 127824
| | || || || || ||||||| | || |||||| ||| || || ||| |||
Sbjct 1416615 GTGCGTTGGCGA-GGTTCGCTGATGTAGGTGTCGATGAGTAGTGAGTAGGTCTCGGAGTG 1416557
Query 127825 GACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCT 127883
|| | | ||| || | ||| | ||||||| |||| || ||| ||| || ||||
Sbjct 1416556 GATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCAGCGAGCCTCGGGTATTTGCACCT 1416498
Query 127884 CATCGGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAAC 127942
| | | ||| | | | ||||| ||||| || || || | || || ||
Sbjct 1416497 C-GCCACTGAATCGCTCGACCAGGTTCTCGTTGACAATGCCGTCTGATGCGGCGAAGAAG 1416439
Query 127943 GCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCG 127999
|| |||| || | ||||| | || | ||||| | | | ||||||||||
Sbjct 1416438 GCAAGGACATGCGAAATGAAGAATCGCTCGTCATCGTTGAGACGCTTGTTCCAGTCGTGC 1416379
Query 128000 AGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034
|| ||||| || ||||| | |||||| || |||||
Sbjct 1416378 AGGTCCTTCGACAGATCGATCTCCTCTGCTGTCCA 1416344
>seq1
Length=1805414
Score = 132 bits (146), Expect = 6e-26
Identities = 300/443 (68%), Gaps = 10/443 (2%)
Strand=Plus/Minus
Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290
|||||| || || ||||||||||||||||| ||||| || ||||| ||| ||||||||
Sbjct 290225 GTAGTCACCTACGCGCTTCTCGAAGAAGTTCGTCTTGCCGGCGAGGGAGATGTTCTCCAT 290166
Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCA--AATTGTTGGCACCCCAATCTGTTTGAGGAGA 127348
|| || || ||||| | | ||| | | ||| || || | | | ||| ||
Sbjct 290165 GAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTGCTGTGGCCG-AGTGCGAG-GAGTAGG 290108
Query 127349 CGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTA 127408
|| || | |||| |||| ||||||| |||| || | |||||| |||| ||
Sbjct 290107 CGGTCAGCGACGAACTCGATGTACTGGCACATGAGCTTGGCGTTCATGCCGAGAAGTGCG 290048
Query 127409 CATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCG 127468
|| || || ||||| | | |||| | | ||| || || ||||||||| | ||| |
Sbjct 290047 CAGGGTAGGGCGTCTGAAAGGAACTCTTGCTCGATCTCGACAGCTTCCGTGATGATCTGG 289988
Query 127469 TGAATAGTGTCCACCCCAGGTCTATTGCGTAAA-GT-CTTGAAGAGTTCCACAG-CAAAC 127525
|| | | ||| | || | ||||| | | || | || || | |||| | ||
Sbjct 289987 TGGACAAGGTCGAGTGATGGCTTGTTGCGGAGATGTGCGTGCAGCAT---ACAGGCGAAG 289931
Query 127526 TCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATG 127585
|| ||| | |||||||||||||| ||||| || || |||||| || || |||||
Sbjct 289930 TCGGTGTGCATGCCCTCGTCACGGGAAATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATC 289871
Query 127586 AGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCC 127645
|| || |||||||| | |||||| || || || || ||||||||||| || |||||
Sbjct 289870 AGCCCGCGCTTCTTGAGCCAGAAGATAGCGGCGAACGAACCAGAGAAGAAAATGCCCTCG 289811
Query 127646 ACACACGCGAACGCAAATAGACG 127668
||| ||||| || | |||||
Sbjct 289810 ACAGCTGCGAAGGCGATGAGACG 289788
>seq198
Length=398492
Score = 131 bits (144), Expect = 2e-25
Identities = 1092/1742 (63%), Gaps = 56/1742 (3%)
Strand=Plus/Minus
Query 115558 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 115617
|||||||||||||| || |||||||| || | |||| | | ||||| || |
Sbjct 356019 CGGAGGTAGTACATGCCAGTCTTGAGTCCTAGACGCCAGCCGGTGAAGTGCATGGACGTG 355960
Query 115618 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 115677
| |||| | || || | |||| || ||||| |||||| ||||||||||||
Sbjct 355959 ATCTTGCCCATCGTCGGCTCCTTCATGTGGATGTTCAGCGATTGGGACTGATCGATGAAG 355900
Query 115678 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTG 115737
|| ||||| || | ||| | || | | | |||| ||||| ||||| |
Sbjct 355899 GCGCCACGATCGGCTGACATCTGGATGATGTTGCGCTGGCTGATCTCCCAGACAGTCTTA 355840
Query 115738 TAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCCTTG 115797
|| || | ||| || || || ||||||| || |||||||||||||| | |
Sbjct 355839 TACAGCTCCTTGATCTCGTCGGGGATATTGGGAATGCGCTGGATAGAGCCACCATCTGCG 355780
Query 115798 ACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCCA----C 115853
| ||| | | |||||| | | |||||| || || | || |||| | |
Sbjct 355779 ATGATGCGGTTCTTCATGTTGTCGCTCCAGAGGCCCATGTCGACAAGGTCCTTGAGCAGC 355720
Query 115854 GAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA-TAGATGTTGG 115912
||| | ||||| || ||||| || || ||| || | ||| |||||||||
Sbjct 355719 CAGGGG----TTGACGACTTGGAACTCGCCGGCCAGGACACGACG-AGAGTAGATGTTGC 355665
Query 115913 TCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCA 115972
| ||||| |||||||||||||||||| |||| ||| || | |||| ||||||||||
Sbjct 355664 TGGTGTACGGCTCAAAGCACTCATTGAACCCCATGATCTGCGATGTGCTTGCTGTGGGCA 355605
Query 115973 TGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGT 116032
| || || | ||| || |||||||| || | | || || |||||||||| |
Sbjct 355604 TAGGCGCGACGAGCAGAGAGTTGCGGACGCCATGCACTGCGATCCGCGCCTTGAGGGCTT 355545
Query 116033 CCCAGT--CGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTG 116090
|||| | | | | || | || || | | ||||||| || | ||||| || ||
Sbjct 355544 CCCAATCCCACAAGTCAG-TGGGTGTCACAC-CCCACATGTCGTATTGGAGCTCGCCCTG 355487
Query 116091 GGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCT 116150
|| || || || | ||||| || ||||| ||| || | ||| |
Sbjct 355486 TGAAATGGGGGAGCCAGGGTAAGTCTCGTAAGGGCCAAGCTTCTCAGCGAGATCGCAAGA 355427
Query 116151 CGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTC 116210
|| || || ||||| || || ||||| || || | ||| | || ||
Sbjct 355426 TGCTGTCAGTGCGGCGTGGTAGATGGTCTCGAAGATCTGCTGATTGAGGAGACGAGCTTC 355367
Query 116211 GTCGGAATCAAACGCGAGACGGCACA-AAATAAATACATCCGCGAGACCTTGGACACCGA 116269
| || || || | | | ||| | | | || | || || ||||| |||||| |
Sbjct 355366 CTTCGACTCGAATGGCATGC-GCAGAGAGAGGAAGGCGTCAGCCAGACCGCTGACACCCA 355308
Query 116270 GGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCC 116329
| || ||||| | |||| ||| || || ||||| ||| || || ||
Sbjct 355307 GACCGATTGGCCTGTGTCGCATGTTGCTGTTGCGAGCTTCAATCACTGGGTACTTGTTAA 355248
Query 116330 TATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGT 116389
||||| | | | || | || ||||| || | ||||| || || | ||| | |
Sbjct 355247 CTTCGATGATCTTGTTCAAGTTGCGAGTGACTACTTGTGTGACCTCGTGCAACTTCTTGA 355188
Query 116390 AATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTAC 116449
| || | | | ||| | ||| || |||| || || | || || || || |
Sbjct 355187 AGTCGTAGGTCTGCTTCTGAATGTCGACGTATGTAGGCAGAGCCAGAGATGCAAGGTTGC 355128
Query 116450 ACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCT 116509
|||||| || || | | |||||||| || || || || ||||| || || ||
Sbjct 355127 ACACAGCTACTTCGTCAGGAGCGGTGTACTCGATGATCTCGGTGCACAAGTTGGAGCTGC 355068
Query 116510 TAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATAT 116569
||| |||||||||||||| || || ||| ||| || || ||||| ||||| |
Sbjct 355067 GAATTGTGCCCAAGTTCTTCTGGTTGCTCTTGCGGTTGGCAGCGTCTTTGTACAGCATGT 355008
Query 116570 ATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGC 116628
| || | || ||||| || || | || |||||| || | ||| | | || | ||| ||
Sbjct 355007 ACGGGTTGCCAGTCTCGGTCTGAGCCTCGAGAATGGCATACCAAATCTTCTG-GGCGCGC 354949
Query 116629 ACAGTGGCGTTGGCTCGCCCCT-CCTCC----TCGTACTTTGTGTAGAGGGCCTCAAACT 116683
| ||| ||| ||| | ||| | |||||| ||||||||| || || ||||
Sbjct 354948 ATAGT--------CTCACCCTTGCCTTCGCTTTCGTACCGTGTGTAGAGCGCTTCGAACT 354897
Query 116684 CTTCACC-CACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGA 116742
| || || ||| | || | || || || || | || || | || | ||| | |
Sbjct 354896 CATCCCCGTACA-CATCGGCAAGGCCGGGGCACTCGTTCGGGCACATCAGTGTCCAATCA 354838
Query 116743 CCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCC 116802
| || | || |||||||||||||| || |||||||| || || |||| | ||
Sbjct 354837 GCGTTATCTTGCACACGCTTCATGAAGAGATCAGGGATCCACAGAGCGTAGAACAAGTCA 354778
Query 116803 CGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCC 116862
||| ||| | || || | || || || |||| || | ||| || ||| ||
Sbjct 354777 CGAGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAAGGACAAGATGTCT 354718
Query 116863 GCGTGCCACGGTTCCAGGTACACCGCGATTGACCC--CTTGC--GACGACCAGCCTGGTT 116918
||||||||||| || ||||| | |||| || || | || | | ||| ||||||
Sbjct 354717 GCGTGCCACGGCTCGAGGTAGATGGCGAATGCGCCGGGTCGCTTGTTG-CCACCCTGGTC 354659
Query 116919 TACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCC 116978
|||||||| || || ||| || || || ||||| || | || ||| | ||| |||
Sbjct 354658 GACATACCTAGCAGTGTTGTTGAACACCCGTAGCATGGGTACGAGACCGTTTGATGTGCC 354599
Query 116979 ATTTGTCCCCCGAA--TACGAGACTTGTTGGCTCTGACATCGTGGATGTGC----ATACC 117032
|||||| ||| || |||||| | || | | || || ||||||| | ||
Sbjct 354598 ATTTGTACCCGCAATGTACGAG-CCAGTCG--CCCGA-AT--GCGATGTGCGTTGAGTCC 354545
Query 117033 AATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATC 117092
|| || || || || ||||| || || | | || || |||| || || ||
Sbjct 354544 GATGCCACCGGCGTTTTTCGAGATCATCGCACAAGTCTTCAGCGTGTCGTAAATGCCCTC 354485
Query 117093 GATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTT--GGTGTA 117150
|| ||| |||| | |||| |||||||| | | ||||| ||| |||||
Sbjct 354484 AATGCTGTCGTCCTTCATGTCGATCAGGAAGCATGAAGCAAGTTGTG--CTTGAGGTGTG 354427
Query 117151 CCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTTATCGTA 117209
|||||| |||| || || || | || || |||| |||| | | |||||| | | |||
Sbjct 354426 CCAGCGCTGAACAGCGTCGGCGAAGCATGTGTGAA-ATACTTGTTGGACATGTAGTTGTA 354368
Query 117210 GGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAACAT 117269
||||| | | | |||||| || ||||| ||||| | | ||| ||||| | |||
Sbjct 354367 CGTCTCGATCGCCGCATCAATGTCCTCGCCGTGTATACCTACAGCGACACGCATGATCAT 354308
Query 117270 GT 117271
||
Sbjct 354307 GT 354306
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613505152419720
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