Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rachicladosporium_20antarcticum_20[genbank_20GCA_5F002077065.1_20201 7-04-03] 267 sequences; 47,410,550 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq192 421 8e-113 seq194 277 2e-69 seq202 118 1e-21 seq146 107 2e-18 >seq192 Length=480423 Score = 421 bits (466), Expect = 8e-113 Identities = 781/1142 (68%), Gaps = 12/1142 (1%) Strand=Plus/Plus Query 7010 TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTA 7069 ||||| | | |||||| || ||||| | || |||||||| || ||||| |||||||| Sbjct 146538 TCACCAGAGAGGATGGCAGCCTGGACAGCAGCACCGTATGCAACAGCCTCGTCGGGGTTG 146597 Query 7070 ATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGG 7129 || | || || | || || ||||| || | || || | | | || | || ||| Sbjct 146598 ATGGACTTGTTGGGCTCCTTGCCGTTGAAGAAGTCGGAAACGAGCTTCTGCACCTTGGGG 146657 Query 7130 ATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAG 7189 || || || |||||||| || | |||||| || | || || || |||||||| | | Sbjct 146658 ATACGGGTGGATCCACCAACGAGAACGATCTCGTGGACGGAAGACTTGTCGATCTTGGCG 146717 Query 7190 TCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCC 7249 || || || || || || ||||| ||||| | |||| |||| ||| Sbjct 146718 TCACGGAGGACACGCTCCACGGGGTCCATGGTGGATCGGAAGAGGTCCTGGCACAACTCC 146777 Query 7250 TCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATT 7309 || || ||||| ||||| ||||| || ||||| || || || ||||| | || || ||| Sbjct 146778 TCGAAGCGTGCGCGGGTGATGGAGGTGTAGAAGTCGACACCCTCGTAGAGAGAGTCGATT 146837 Query 7310 TCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGT 7369 || |||| || || || | || || || ||||| || ||||| || || || || Sbjct 146838 TCGATGGAAGTCTGAGCGGAGCTGGACAATGTGCGCTTCGCCCGCTCGCATGCGGTGCGG 146897 Query 7370 AAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCT 7429 | |||||| || || |||||||| | || | || ||||| | || ||||| ||||| Sbjct 146898 AGACGACGGAGAGCGCGCGGGTTGCTGGCCAGGTCCTTCTTGTTCTTGCGTTTGAACTC- 146956 Query 7430 TCAGA---GAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCC 7486 ||| |||||| | ||| | ||||| ||||| ||||||||||| || || Sbjct 146957 --AGACATGAAGTGGTTGACGAGGCGGTTGTCGAAGTCTTCGCCACCCAAGTGGGTGTCA 147014 Query 7487 CCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAAC 7546 || || |||| || || || |||||||| | || ||| | | || ||| ||||| || Sbjct 147015 CCGGCAGTCGACTTTACCTCGAAGATACCCTCCTCGATGGTGAGCAGCGACACATCGAAA 147074 Query 7547 GTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGA 7606 || |||||||||| ||| || ||||| ||||| ||| | || | ||||| |||||| Sbjct 147075 GTGCCACCACCCAAGTCGAAGATGAGCACGTTGCGCTCGCCCTCAGTCTTCTTGTCGAGA 147134 Query 7607 CCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCA 7666 ||||| || || || || || || || || || || || || || |||||| |||||| Sbjct 147135 CCGTAGGCAATTGCAGCAGCAGTCGGCTCGTTGATGATGCGGAGGACGTTCAGTCCAGCA 147194 Query 7667 ATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTT 7726 || | || || || || ||||| || || || ||||| ||||| || || || || Sbjct 147195 ATGAGACCGGCGTCCTTGGTGGCTTGGCGCTGGGAGTCGTTGAAGTATGCGGGCACAGTG 147254 Query 7727 ACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTA 7786 ||||| |||| |||| ||| |||||| || || || || | || |||| ||||| Sbjct 147255 ACGACTGCGTTGTTGACAGTCTCACCGAGGTATGACTCTGCCGTTTCCCTCATCTTGGTC 147314 Query 7787 AGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACT 7846 | | ||| || || ||||| || | | |||| || || || || || || || || Sbjct 147315 AAGATCATGGAAGAGATCTCCTCGGGTGTGAACTCCTTGGTCTCGCCCTTGAACTCGACC 147374 Query 7847 TCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCG 7906 | || | || || |||| | | ||| ||||| | | | | |||||||| Sbjct 147375 TGAACGACCGGCTT-GCCGC--CCTTGTCGATGACCTTGAAGGGGAAGTGCTTCATATCA 147431 Query 7907 TCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTG 7966 | || |||| | ||| ||||| | || || || |||||||| || || |||||| Sbjct 147432 GCCTGCACCTCTGCGTCGTTGAACTTGCGGCCAATGAGGCGCTTTGCGTCGAAGACTGTG 147491 Query 7967 TTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTT 8026 || ||||||||||||| |||||||||||||| ||| || || || || || | Sbjct 147492 TTGATGGGGTTCATGGCGACTTGGTTCTTCGCCGAGTCACCAATGAGGCGCTC---GGTG 147548 Query 8027 TCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCT 8086 || || || |||||| |||| || || || ||||| || |||||||| || || || || Sbjct 147549 TCTGTGAAGGCGACGAACGAGGGCGTTGTGCGATTGCCCTGGTCGTTGGCGATGATCTCA 147608 Query 8087 ACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACCGATT 8146 | |||||| | | ||| ||| || || || || || || || ||||| ||||||||| Sbjct 147609 ATGCGGTCATCGCGGAAGATGCCCACACAGGAGTAGGTCGTACCCAAATCGATACCGATT 147668 Query 8147 GC 8148 || Sbjct 147669 GC 147670 >seq194 Length=423655 Score = 277 bits (306), Expect = 2e-69 Identities = 480/695 (69%), Gaps = 12/695 (2%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || |||||||||||||| || || || || |||| ||||| || ||||| || Sbjct 399298 TCGAAGTCCTCACCACCCAAGTGAGTGTCACCGGCAGTCGACTTGACCTCGAAGATGCCC 399239 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | || ||| | | || ||| ||||| || || ||||| |||| ||| || || || ||| Sbjct 399238 TCCTCGATGGTGAGCAGCGACACATCGAAGGTGCCACCTCCCAAGTCGAAGATAAGCACG 399179 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || ||| | || | ||||| || |||||||| || || || || || || || || Sbjct 399178 TTGCGCTCGCCCTCAGTCTTCTTGTCAAGACCGTAGGCAATGGCAGCAGCAGTCGGCTCG 399119 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || || || || || |||||| ||||| || | || || || || ||||| || Sbjct 399118 TTGATGATGCGGAGGACGTTCAGCCCAGCGATGAGACCAGCGTCCTTGGTAGCTTGACGC 399059 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || || ||||| ||||| || || || || ||||| |||| |||| ||| |||||| Sbjct 399058 TGGGAGTCGTTGAAGTATGCGGGTACAGTGACGACTGCGTTGTTGACAGTCTCACCGAGG 398999 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816 || || || || | || |||| ||||| | | ||| || || ||||| || | | | Sbjct 398998 TATGACTCTGCCGTCTCCCTCATCTTGGTCAAGATCATGGAAGAGATCTCCTCGGGTGTA 398939 Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACC---G 7873 |||| || || || || || || || || | || | || || || |||| | Sbjct 398938 AACTCCTTGGTCTCGCCCTTGAACTCGACCTGAACGACTGGCTT----GC--CACCCTTG 398885 Query 7874 GGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTT 7933 ||| ||||| | | | | ||||| ||| |||| |||| ||| ||||| Sbjct 398884 TCGATGACCTTGAAGGGGAAGTGCTTCATGTCGGCTTGCACCTCAGCGTCGTTGAACTTG 398825 Query 7934 CTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTC 7993 | || || || |||||||| || || |||||||| | ||||||||||| ||||||| Sbjct 398824 CGGCCAATGAGGCGCTTTGCGTCGAAGACTGTGTTGATAGGGTTCATGGCGACTTGGTTC 398765 Query 7994 TTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTC 8053 || |||| ||| ||||| || || || | || || || |||||| |||| || || Sbjct 398764 TTTGCCGAGTCACCGATGAGGCGCTC---GGTGTCTGTGAAGGCGACGAACGAGGGCGTT 398708 Query 8054 GTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACG 8113 || || || || |||||||| || ||||| || | |||||| | | ||| ||| || Sbjct 398707 GTGCGGTTGCCCTGGTCGTTGGCGATAATCTCGATGCGGTCATCGCGGAAGATGCCCACA 398648 Query 8114 CACGAATACGTTGTTCCTAAATCAATACCGATTGC 8148 || || || || || || ||||| ||||||||||| Sbjct 398647 CAGGAGTAGGTCGTACCCAAATCGATACCGATTGC 398613 Score = 150 bits (166), Expect = 2e-31 Identities = 530/827 (64%), Gaps = 3/827 (0%) Strand=Plus/Minus Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGAT 6628 ||||| || || || ||||| || || ||| | ||| || ||||| || || || Sbjct 400243 TCATCCTCGTCCTTGTACTTCTCGGCCTCTGCCAACATGCGCTCGATGTCCTCCTTTGAC 400184 Query 6629 AATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCA 6688 | | ||||| || || || || ||||| | || || || | | |||| || | Sbjct 400183 AGACGGCCCTTGTCGTTGGTGATGACGATCTTGTTGGTCTTGCCGGTGCCCTTCTCGAGA 400124 Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748 || || || | ||||| || ||||| | ||||| | || | |||||| || | Sbjct 400123 GCGGAGACGTTGAGGATACCGTTGGCATCGATGTCGAAGGTGACCTCAATTTGAGGGACA 400064 Query 6749 CCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTC 6808 || | || || | ||| | ||| |||| ||||| | || || | |||| ||| || Sbjct 400063 CCGCGGGGCGCAGGTGGGACACCAGTTAGCTCAAACTTGCCGAGCATGTTGTTGTCCTTC 400004 Query 6809 GCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCC 6868 | ||| ||||| || |||||| ||| ||| | || || || || Sbjct 400003 GTGCGAGCACGCTCACCCTCGAAGACTTGAATGAGCACACCGGGCTGGTTGTCGGAGAAG 399944 Query 6869 GTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTC 6928 || ||||||| | | ||||| | || || || || || | | |||| ||| ||| Sbjct 399943 GTGGAGAAGACCTCTGACTTCTTCGTGGGGATGGTGGTGTTGCGCTTGATAAGCGGCGTC 399884 Query 6929 ATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGG 6988 || | ||||| ||| |||| || | |||| || | || || | ||| | | Sbjct 399883 ATCACGCCACCAGCAGTCTCGATACCCATGGACAATGGCGCGACATCGAGGAGGAGAATC 399824 Query 6989 TCTTGAACAGATTCGTTCCCT---TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCG 7045 || | || | | | ||||| | | |||||| || ||||| | || || Sbjct 399823 TCGTTGGTGGACTTGCTGGAGGTGTCACCAGAGAGGATGGCAGCCTGGACAGCAGCGCCA 399764 Query 7046 TATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCC 7105 || || || |||||||||||||| || | || || | || || |||||||| | || Sbjct 399763 TAGGCCACAGCCTCATCGGGGTTGATAGACTTGTTGGGCTCCTTGCCGTTAAAGAAGTCG 399704 Query 7106 GATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTC 7165 || | | | || | || ||||| || || || ||||| || | ||||| || | Sbjct 399703 GAGACGAGCTTCTGCACCTTGGGGATACGAGTGGAGCCACCAACGAGGACGATCTCGTGG 399644 Query 7166 ACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTA 7225 || || || |||||||| | ||| || || || || || ||||| | Sbjct 399643 ACGGAAGACTTGTCGATCTTAGCGTCGCGGAGGACACGCTCCACTGGGTCCATGGTGGAA 399584 Query 7226 CGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCA 7285 ||||| | ||| ||||| ||||| |||||||| || || ||||| || ||||| ||| Sbjct 399583 CGGAAGAGATCCTGGCACAGCTCCTCGAAACGTGCGCGAGTGATGGAGGTGTAGAAGTCA 399524 Query 7286 ACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGC 7345 || || ||||| | || || ||||| |||| || || || | || || || ||| Sbjct 399523 ACACCCTCGTAGAGAGAGTCGATTTCGATGGAAGTCTGAGCGGAGCTGGACAATGTGCGC 399464 Query 7346 TTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTT 7392 || || ||||| || |||||||| | |||||||||||| || ||||| Sbjct 399463 TTCGCCCGCTCGCAGGCCGTTCGGAGACGACGAAGGGCGCGGGGGTT 399417 >seq202 Length=334784 Score = 118 bits (130), Expect = 1e-21 Identities = 232/340 (68%), Gaps = 5/340 (1%) Strand=Plus/Minus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||||||||| || ||||| | || || || || ||||| || | ||| || || | ||| Sbjct 104159 ATCGAAATCCTCGCCACCGAGATGGGTGTCACCGGCGGTGGCCTGGACCTCGAATACACC 104100 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 || | | || | |||||||| || || || ||||| || || | | || | Sbjct 104099 CTGATCGACAGTCAAGATGGAAACATCGAAGGTTCCTCCACCGAGATCGTAGACGATAAT 104040 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 | || | ||| | |||| ||||| || || |||| ||| ||||| || || || Sbjct 104039 CTGGCGCTCCTGGTC---GGTCTTGTCGAGGCCATAGGCGAGAGCGGCCGCGGTGGGCTC 103983 Query 7636 ATTAATAATACGAAG-ACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTC 7694 |||| || |||||| ||| || || || || || || | ||||| || || || | Sbjct 103982 GTTAACAACACGAAGGACA-TTGAGACCGGCGATTGTGCCTGCATCCTTGGTGGCAGCGC 103924 Query 7695 GTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGA 7754 | || | || || |||||||||||||| || ||||| |||| |||||| |||| |||| Sbjct 103923 GCTGAGCGTCATTGAAGTAGGCCGGGACAGTGACGACTGCGTTCGTGACCTTCTCGCCGA 103864 Query 7755 GATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCAT 7794 | || || |||| || ||||||||| | |||||| Sbjct 103863 GGTATTGCTCAGCGACTTCCTTCATTTTGCCCAAAACCAT 103824 >seq146 Length=780984 Score = 107 bits (118), Expect = 2e-18 Identities = 232/341 (68%), Gaps = 7/341 (2%) Strand=Plus/Minus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||||||||| |||||||| | || || || || ||||| || | ||| || || | ||| Sbjct 166951 ATCGAAATCCTCACCACCGAGATGGGTGTCACCGGCGGTGGCCTGGACCTCGAACACACC 166892 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 || | | || | || ||||| || || || ||||| || || | | || | Sbjct 166891 CTGGTCGACAGTCAAAATGGAGACATCGAAGGTTCCTCCACCGAGATCGTAGACGATGA- 166833 Query 7576 GTTCGTATCG-TCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTT 7634 || | || || | | | |||| ||||| || || |||| ||| ||||| || || | Sbjct 166832 --TC-TGGCGCTCCTGATCGGTCTTGTCGAGGCCATAGGCGAGAGCGGCCGCGGTGGGCT 166776 Query 7635 CATTAATAATACGAAG-ACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGT 7693 | || | || ||| || ||| || || || ||||| || | ||||| || || || Sbjct 166775 CGTTGACAACACGGAGGACA-TTGAGACCGGCAATTGTGCCTGCATCCTTGGTGGCAGCG 166717 Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCG 7753 || || | ||||| |||||||||||||| || || || |||| ||||| |||| ||| Sbjct 166716 CGCTGAGCGTCGTTGAAGTAGGCCGGGACAGTGACAACTGCGTTTGTGACCTTCTCGCCG 166657 Query 7754 AGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCAT 7794 ||||| || |||| || ||||| ||| || ||||| Sbjct 166656 AGATATTGCTCAGCGACTTCCTTCATCTTGCCCAGGACCAT 166616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635130680244280