Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20antarcticum_20[genbank_20GCA_5F002077065.1_20201
7-04-03] 267 sequences; 47,410,550 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq198 147 3e-30
seq112 131 2e-25
seq188 98.7 1e-15
>seq198
Length=398492
Score = 147 bits (162), Expect = 3e-30
Identities = 544/843 (65%), Gaps = 16/843 (2%)
Strand=Plus/Minus
Query 106469 GATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACAC 106528
||||| | ||||| ||||| || || | | |||||||| | || || || |||
Sbjct 355140 GATGCAAGGTTGCACACAGCTACTTCGTCAGGAGCGGTGTACTCGATGATCTCGGTGCAC 355081
Query 106529 AAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCC 106588
|||||||| || ||| || ||||| ||||| ||||| ||||| |||| || ||
Sbjct 355080 AAGTTGGAGCTGCGAATTGTGCCCAAGTTCTTCTGGTTGCTCTTGCGGTTGGCAGCGTCT 355021
Query 106589 TTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-C 106647
||||| |||||||| || | || ||||| ||||| | || |||||| || | ||| | |
Sbjct 355020 TTGTACAGCATGTACGGGTTGCCAGTCTCGGTCTGAGCCTCGAGAATGGCATACCAAATC 354961
Query 106648 ATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGC-CTCGTACTTTGTGTAGAGGG 106706
|| | ||| | | | | | ||| | ||| ||| |||||| ||||||||| |
Sbjct 354960 TTCTG-GGCGCGCATAGT----CTCACCCTTGCCTTCGCTTTCGTACCGTGTGTAGAGCG 354906
Query 106707 CTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAG 106766
|||| ||||| || || | | |||| || || || || || || || | || |
Sbjct 354905 CTTCGAACTCATCCCCGTACACATCGGCAAGGCCGGGGCACTCGTTCGGGCACATCAGTG 354846
Query 106767 ACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAA 106826
||| | | | || | || ||||||||||| || || || |||||||| | | |
Sbjct 354845 TCCAATCAGCGTTATCTTGCACACGCTTCATGAAGAGATCAGGGATCCACAGAGCGTAGA 354786
Query 106827 AGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCA 106886
| | || | | || |||| || | || ||||| || | |||||||| ||
Sbjct 354785 ACAAGTCACGAGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAAGGACA 354726
Query 106887 TGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCG---ACGCCCAG 106943
||| || |||||||| ||||| || |||| |||| | || ||| |||
Sbjct 354725 AGATGTCTGCGTGCCACGGCTCGAGGTAGATGGCGAATGCGCCGGGTCGCTTGTTGCCAC 354666
Query 106944 CTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTG 107003
| || | ||||| | || ||| ||| || || || ||||| || | | ||| | ||
Sbjct 354665 CCTGGTCGACATACCTAGCAGTGTTGTTGAACACCCGTAGCATGGGTACGAGACCGTTTG 354606
Query 107004 ATTGACCATTTGTCCCCCGAA--TACGAGATTTATTGGCTCTCACATCATGGATGTGCAT 107061
|| |||||||| ||| || |||||| | | || | | ||| || |
Sbjct 354605 ATGTGCCATTTGTACCCGCAATGTACGAG--CCAGTCGCCCGAATGCGATGTGCGTTGAG 354548
Query 107062 CCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACC 107121
|| || || || || || ||||| |||||| | | || || | || || ||
Sbjct 354547 TCCGATGCCACCGGCGTTTTTCGAGATCATCGCACAAGTCTTCAGCGTGTCGTAAATGCC 354488
Query 107122 GTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGT 107181
| || ||| ||||| || |||| |||||||| | | || | | |||||
Sbjct 354487 CTCAATGCTGTCGTCCTTCATGTCGATCAGGAAGCATGAAGCAAGTTGTGCTTGAGGTGT 354428
Query 107182 ACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGT 107240
||||| |||| || || || | || || |||| |||| | | |||||| | || ||
Sbjct 354427 GCCAGCGCTGAACAGCGTCGGCGAAGCATGTGTGAA-ATACTTGTTGGACATGTAGTTGT 354369
Query 107241 ATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACA 107300
| ||||| | | | ||||||||| || ||||| || || | || |||||||| | ||
Sbjct 354368 ACGTCTCGATCGCCGCATCAATGTCCTCGCCGTGTATACCTACAGCGACACGCATGATCA 354309
Query 107301 TGT 107303
|||
Sbjct 354308 TGT 354306
>seq112
Length=1778705
Score = 131 bits (144), Expect = 2e-25
Identities = 338/502 (67%), Gaps = 16/502 (3%)
Strand=Plus/Minus
Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045
||||| || || |||||||| |||||||| ||||| || | ||| ||||| |||||
Sbjct 1417149 TAGTCACCTACGCGCTTCTCGAAGAAGTTTGTCTTGCCGGCGAGGGAGATGTTCTCCATG 1417090
Query 117046 AAGTCAAATGGATTCTTCGCGTTCCA--AATGG--GTGGCACCCCAACTTGTTTGAGGAG 117101
||||| || || || | || || | | | | ||||| | | | ||| ||
Sbjct 1417089 AAGTCGAAGGGGTTGGTGGCATTGTAGTACTTGCTGTGGC----CGAGTGCGAGGAGTAG 1417034
Query 117102 ACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGATT 117161
||| || | ||| |||| ||||||| | |||| || | |||||| |||| ||
Sbjct 1417033 ACGGTCAGCGACAAACTCGATGTACTGGCACATGAGCTTGGCGTTCATGCCGAGAAGTGC 1416974
Query 117162 ACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGC 117221
|| || || |||||| | | |||| ||| ||| ||||| || ||||| | | |||
Sbjct 1416973 GCAGGGCAGGGCGTCCGATAGGAACTCTTGCTCGATCTCGACGGCCTCGGTGATGATCTG 1416914
Query 117222 GTGGATAGTTTCG-GTAGTGGGTCTATTACGCAAA-GT-CTTGAAGAGCTCCACGGCAAA 117278
||||| ||| || ||| | | || || | | || | || || | || ||||||
Sbjct 1416913 GTGGACGAGGTCGAGTGATGGCT-TGTTGCGGAGATGTGCGTGCAGCA-TGCA-GGCAAA 1416857
Query 117279 CTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCAT 117338
|| ||| | ||||| || || || || || ||||| ||||| ||||| |||||
Sbjct 1416856 GTCGGTGTGCATGCCCTCGTCACGCGAGATGAGCTCATTAGAGAACGTGAGGCCGGGCAT 1416797
Query 117339 GAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTC 117398
||| || |||||||| | ||| | || || ||| || ||||||||||||||||||||
Sbjct 1416796 GAGGCCGCGCTTCTTGAGCCAGAAGATGGCAGCGAAGGAGCCGGAGAAGAAGATACCCTC 1416737
Query 117399 CACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAAACCATT 117457
||| || || || | ||| || | |||||| ||| | | || | | ||| |
Sbjct 1416736 AACAGCTGCGAAGGCGATAAGACGGCAGCCGAAGG-TCGATGCGTCGTCGCTGATCCACT 1416678
Query 117458 TCATTGCCCATTTCGCCTTCTT 117479
| | |||||| || ||||||||
Sbjct 1416677 TTAGTGCCCAGTTAGCCTTCTT 1416656
>seq188
Length=510084
Score = 98.7 bits (108), Expect = 1e-15
Identities = 199/287 (69%), Gaps = 9/287 (3%)
Strand=Plus/Minus
Query 9359 TTGCTTTCCCACG-GCATCAATCTCATCAATGAAGACAATACATG--GTTGATTTTCGCG 9415
||||||| ||| ||||| |||||||||||||||| || |||| || || ||| ||
Sbjct 119347 TTGCTTTTCCAATAGCATCGATCTCATCAATGAAGATGATGCATGGTGTCGACTTT--CG 119290
Query 9416 GGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAA 9475
|| | | || || || || || | | || |||||||||||||||||||| ||
Sbjct 119289 TGCATTGGCGAACAGGTCTCGCACACGGGAAGGACCGACACCAACAAACATCTCCACGAA 119230
Query 9476 GTTTGCGGCGGA-ACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGA 9534
| | | || || | || |||||| ||| ||||||||| || ||||| ||||
Sbjct 119229 TTCGGACCCTGACACGCT-GAAGAAGGGCACACCAGATTCACCGGCCGTGGCTTTTGCGA 119171
Query 9535 GAAGAGTCTTACCCGTACCTGGCTTACCCGC-GAGGAGGGCACCCCGTGGAATCTTGGCG 9593
| | |||||||| ||||| || | |||| || | || || ||||||||||| |||
Sbjct 119170 GCAACGTCTTACCAGTACCAGG-TGGTCCGCTCAGAATCGCGCCTCGTGGAATCTTCGCG 119112
Query 9594 CCACTTCCAAAGTATCTCTCAGGTTGCTTGAGAAAATCCACAATCTC 9640
||| | | | | |||| |||||||| | || | ||||| |||
Sbjct 119111 CCAAGTTTAGTGAAGATCTCGGGTTGCTTCAAGAATTGCACAAACTC 119065
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589978830939080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |