Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20antarcticum_20[genbank_20GCA_5F002077065.1_20201
7-04-03] 267 sequences; 47,410,550 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq228 105 4e-18
seq184 104 2e-17
>seq228
Length=1254254
Score = 105 bits (116), Expect = 4e-18
Identities = 139/193 (72%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849
||| ||||| ||||| ||||| ||||| | || | || || ||||| || ||||| ||
Sbjct 555821 TTCCTTCTGGATGTTGTAGTCGGAAAGAGTACGACCGTCCTCGAGCTGCTTGCCGGCGAA 555880
Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909
|| || || ||||||||| | || | |||||||| || |||||| || |||
Sbjct 555881 GATGAGGCGCTGCTGGTCTGGAGGAATACCCTCCTTATCCTGGATCTTCGACTTCACGTT 555940
Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969
| || | || || |||||| |||| ||| ||||| || || ||||| ||||| ||
Sbjct 555941 GTCGATGGTGTCGGAGGACTCAACCTCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTGAC 556000
Query 34970 AAAGATCTGCATA 34982
||||||||||||
Sbjct 556001 GAAGATCTGCATA 556013
>seq184
Length=1511567
Score = 104 bits (114), Expect = 2e-17
Identities = 138/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||| ||||||||||| ||||| | || | || || || || || ||||| ||
Sbjct 735737 TCCTTCTGGATGTTATAGTCGGAAAGAGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAA 735796
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || || || |||||| | || | ||||||||||| |||||| ||||||
Sbjct 735797 ATGAGGCGCTGTTGGTCTGGAGGAATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTG 735856
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970
| || | || | |||||| |||| ||| ||||| || || ||||| ||||| ||
Sbjct 735857 TCGATGGTGTCGGATGACTCAACCTCGAGGGTGATGGTCTTGCCGGTGAGCGTCTTGACG 735916
Query 34971 AAGATCTGCATA 34982
||||||||||||
Sbjct 735917 AAGATCTGCATA 735928
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324632543621976
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |