Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20antarcticum_20[genbank_20GCA_5F002077065.1_20201
7-04-03] 267 sequences; 47,410,550 total letters
Query= NC_018874.1
Length=211518
Score E
Sequences producing significant alignments: (Bits) Value
seq206 89.7 7e-13
seq113 84.2 3e-11
>seq206
Length=1270293
Score = 89.7 bits (98), Expect = 7e-13
Identities = 136/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 197391 CATAAGTTCCCTCCTCTCTCTGAAGCTCTTGTTGACCTGAGACACTCCGTTCATGTACAA 197450
|||||| || | | || | |||| |||||||||| | | | ||||| | | | |
Sbjct 366278 CATAAGGTCTCGTCGTTCGCGGAAGGGCTTGTTGACCAGTGCTTCGCCGTTGAGGAAGAG 366219
Query 197451 CACGTCAAAAGCAAAGACGCACACCTGGACGGTTATCTCTTCTTCCTTGACATCTTTACG 197510
|| || || || |||||||| || | ||| | || |||||| ||| ||||||||
Sbjct 366218 GACATCGAATGCGAAGACGCAGACTTTGACTTTGATATCTTCTGTCTTCACATCTTTCTT 366159
Query 197511 TTTTCTGGTCGCCAGCTTTTGAAAGGGAAGGATCTGCTTCTTCTCAACGTCCCAAGCAAC 197570
|| || ||| |||| ||| || || |||| ||||||||||| || ||||| || ||
Sbjct 366158 CTTCCTTGTCATGAGCTGTTGGAATGGTAGGACGTGCTTCTTCTCGACATCCCAGGCTAC 366099
Query 197571 TGCCTCAGCGTCCA 197584
|| |||| |||||
Sbjct 366098 TGTCTCACAGTCCA 366085
>seq113
Length=896820
Score = 84.2 bits (92), Expect = 3e-11
Identities = 118/166 (71%), Gaps = 0/166 (0%)
Strand=Plus/Minus
Query 197419 TTGTTGACCTGAGACACTCCGTTCATGTACAACACGTCAAAAGCAAAGACGCACACCTGG 197478
||||||||| | | | | ||||| | | | | ||||| || || |||||||| |||| |
Sbjct 195288 TTGTTGACCAGTGCCTCGCCGTTGAGGAATAGAACGTCGAAGGCGAAGACGCAGACCTTG 195229
Query 197479 ACGGTTATCTCTTCTTCCTTGACATCTTTACGTTTTCTGGTCGCCAGCTTTTGAAAGGGA 197538
|| | || || ||| ||||||||| || || || ||| |||| || || ||
Sbjct 195228 ACTTTGATGTCCTCTGTCTTGACATCCTTCTTCTTCCTCGTCATAAGCTGCTGGAATGGC 195169
Query 197539 AGGATCTGCTTCTTCTCAACGTCCCAAGCAACTGCCTCAGCGTCCA 197584
|||| ||||||||||| || ||||| || |||| ||| |||||
Sbjct 195168 AGGACGTGCTTCTTCTCGACATCCCAGGCTACTGTTTCACAGTCCA 195123
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 676727341414960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |