Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rachicladosporium_20antarcticum_20[genbank_20GCA_5F002077065.1_20201 7-04-03] 267 sequences; 47,410,550 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq198 145 9e-30 seq112 131 2e-25 seq188 86.0 7e-12 >seq198 Length=398492 Score = 145 bits (160), Expect = 9e-30 Identities = 551/851 (65%), Gaps = 18/851 (2%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 |||||| ||||| ||||||| ||||| | || || ||||| || ||||||||| | | Sbjct 354299 CCACAGCACATGATCATGCGTGTCGCTGTAGGTATACACGGCGAGGACATTGATGCGGCG 354358 Query 75272 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 | ||||| ||| || | |||||| | | |||| |||| || || | || || || || Sbjct 354359 ATCGAGACGTACAACTACATGTCCAACAAGTAT-TTCACACATGCTTCGCCGACGCTGTT 354417 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 || ||||| ||||| | | || | | |||||||| |||| || ||||| || Sbjct 354418 CAGCGCTGGCACACCTCAAGCACAACTTGCTTCATGCTTCCTGATCGACATGAAGGACGA 354477 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 | || | || || || | || || | | |||||| ||||| || || || Sbjct 354478 CAGCATTGAGGGCATTTACGACACGCTGAAGACTTGTGCGATGATCTCGAAAAACGCCGG 354537 Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTA--TTCGGGGGACA 75508 || || || | || ||| | | || | | |||||| || ||| ||| Sbjct 354538 TGGCATCGGACTCAACGCACATCGCATTCGGGCGACTGG--CTCGTACATTGCGGGTACA 354595 Query 75509 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 75568 ||||| |||| | ||| | | || ||||| || || || ||| ||| || | ||| Sbjct 354596 AATGGCACATCAAACGGTCTCGTACCCATGCTACGGGTGTTCAACAACACTGCTAGGTAT 354655 Query 75569 GTAAATCAAGCGGGGCGTC--GCAAGGGGTC-CAT-CGCGGTCTACTTGGAACCATGGCA 75624 || | || | | ||| | || | | | ||| ||| ||||| | || || ||||| Sbjct 354656 GTCGACCAGG-GTGGCAACAAGCGACCCGGCGCATTCGCCATCTACCTCGAGCCGTGGCA 354714 Query 75625 TGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTG 75684 || || ||| || |||||||| | || ||||| || | || |||| || Sbjct 354715 CGCAGACATCTTGTCCTTCCTTGACCTGCGCAAGAACCACGGCAAGGAGGAGGTCCGCGC 354774 Query 75685 TAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGG 75744 | | || | || | | |||||||| || || || ||||||||||| || | || Sbjct 354775 TCGTGACTTGTTCTACGCTCTGTGGATCCCTGATCTCTTCATGAAGCGTGTGCAAGATAA 354834 Query 75745 TGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGA 75804 | | | ||| | || | || || || || || || || |||| | | || || Sbjct 354835 CGCTGATTGGACACTGATGTGCCCGAACGAGTGCCCCGGCCTTGCCGATGTGTACGGGGA 354894 Query 75805 GGAGTTTGAAGCCCTCTACACAAAGTATG-AAGAGGAGGGTAGAGCCAATGCGACTGTAC 75863 ||||| ||||| ||||||||| ||| | ||| | ||| || | || |||| | | Sbjct 354895 TGAGTTCGAAGCGCTCTACACACGGTACGAAAGCGAAGGCAAGGG----TGAGACTATGC 354950 Query 75864 CAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATAT 75922 ||| | || | ||||| | || |||||| | | ||||| |||||||| | || || Sbjct 354951 GCGCC-CAGAAGATTTGGTATGCCATTCTCGAGGCTCAGACCGAGACTGGCAACCCGTAC 355009 Query 75923 ATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAG 75982 ||||| ||||| || ||| ||| ||||| ||||| ||||| ||||| ||||| Sbjct 355010 ATGCTGTACAAAGACGCTGCCAACCGCAAGAGCAACCAGAAGAACTTGGGCACAATTCGC 355069 Query 75983 AGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGC 76042 ||||| || | ||||| || || | |||||||| | | || || ||||| ||| Sbjct 355070 AGCTCCAACTTGTGCACCGAGATCATCGAGTACACCGCTCCTGACGAAGTAGCTGTGTGC 355129 Query 76043 AATTTGGCATC 76053 || | ||||| Sbjct 355130 AACCTTGCATC 355140 >seq112 Length=1778705 Score = 131 bits (144), Expect = 2e-25 Identities = 338/502 (67%), Gaps = 16/502 (3%) Strand=Plus/Plus Query 65023 AAGAAGGCGAAATGGGCAATGAAATGGTTTGAC-ACAAAGTCTCGCTCCTTCGCCGAGCG 65081 |||||||| || |||||| | || ||| | | || | | ||| |||||| | || Sbjct 1416656 AAGAAGGCTAACTGGGCACTAAAGTGGATCAGCGACGACGCATCGA-CCTTCGGCTGCCG 1416714 Query 65082 CCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTA 65141 ||| | || || || ||| |||||||||||||||||||| || ||| || || | Sbjct 1416715 TCTTATCGCCTTCGCAGCTGTTGAGGGTATCTTCTTCTCCGGCTCCTTCGCTGCCATCTT 1416774 Query 65142 TTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCG 65201 ||| | |||||||| || |||||||| ||||| ||||| ||||| || || || || Sbjct 1416775 CTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCTCACGTTCTCTAATGAGCTCATCTCGCG 1416834 Query 65202 AGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAG-AC-TTTGCGTAATAGA 65259 || ||||| | ||| || |||||| || | || || | || | | || || | | Sbjct 1416835 TGACGAGGGCATGCACACCGACTTTGCC-TGCA-TGCTGCACGCACATCTCCGCAACA-A 1416891 Query 65260 CCCACTAC-CGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGATTGAGAAAGGGTT 65318 ||| || ||| ||||| ||| | | ||||| || ||||| ||| ||| ||| Sbjct 1416892 GCCATCACTCGACCTCGTCCACCAGATCATCACCGAGGCCGTCGAGATCGAGCAAGAGTT 1416951 Query 65319 CATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAGATGTCCGAGTA 65378 | | | |||||| || || || || |||| |||||| | || |||| | |||| Sbjct 1416952 CCTATCGGACGCCCTGCCCTGCGCACTTCTCGGCATGAACGCCAAGCTCATGTGCCAGTA 1417011 Query 65379 CATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGTGCCAC--CCATT--TGGA 65434 ||| |||| ||| | || ||||| ||| | | | ||||| | | | | | Sbjct 1417012 CATCGAGTTTGTCGCTGACCGTCTACTCCTCGCACTCG----GCCACAGCAAGTACTACA 1417067 Query 65435 ACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCAACTTCT 65494 | || | || || || ||||| ||||| ||||| ||| | || ||||| ||||||| Sbjct 1417068 ATGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGCCGGCAAGACAAACTTCT 1417127 Query 65495 TTGAGAAGCGAGTTGGGGACTA 65516 | |||||||| || || ||||| Sbjct 1417128 TCGAGAAGCGCGTAGGTGACTA 1417149 >seq188 Length=510084 Score = 86.0 bits (94), Expect = 7e-12 Identities = 187/273 (68%), Gaps = 8/273 (3%) Strand=Plus/Plus Query 175231 GAGATTGTGGATTTTCTCAAGCAACCCGAGAGATATTTTGGAAGTGGTGCCAAGATCCCC 175290 ||| ||||| | || | ||||||||||||| | | | ||| || ||||| || Sbjct 119065 GAGTTTGTGCAATTCTTGAAGCAACCCGAGATCTTCACTAAACTTGGCGCGAAGATTCCA 119124 Query 175291 CGAGGCGCCCTTCTC-GCGGGTAAGCCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCAT 175349 |||||||| |||| |||| | || ||||| || ||||| | ||||| ||||| Sbjct 119125 CGAGGCGCGATTCTGAGCGGACCA-CCTGGTACTGGTAAGACGTTGCTCGCAAAAGCCAC 119183 Query 175350 CGCGGGTGAATCAAATGTCCCATTCATCCA-GTGCTCTGCCGCAAACTTTGTGGAGATGT 175408 || |||||||| ||| || ||| || ||| || | | | || |||||||||| Sbjct 119184 GGCCGGTGAATCTGGTGTGCCCTTCTTCAGCGTG-TCAGGGTCCGAATTCGTGGAGATGT 119242 Query 175409 TTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCCCGCGAAAATCAAC 175468 |||||||||| ||| | | || || || || || | | || || ||| || || Sbjct 119243 TTGTTGGTGTCGGTCCTTCCCGTGTGCGAGACCTGTTCGCCAATGCACG--AAAGTCGAC 119300 Query 175469 --CATGTATTGTCTTCATTGATGAGATTGATGC 175499 |||| || |||||||||||||||| ||||| Sbjct 119301 ACCATGCATCATCTTCATTGATGAGATCGATGC 119333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596567608948960