Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20antarcticum_20[genbank_20GCA_5F002077065.1_20201
7-04-03] 267 sequences; 47,410,550 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq198 145 9e-30
seq112 131 2e-25
seq188 86.0 7e-12
>seq198
Length=398492
Score = 145 bits (160), Expect = 9e-30
Identities = 551/851 (65%), Gaps = 18/851 (2%)
Strand=Plus/Plus
Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271
|||||| ||||| ||||||| ||||| | || || ||||| || ||||||||| | |
Sbjct 354299 CCACAGCACATGATCATGCGTGTCGCTGTAGGTATACACGGCGAGGACATTGATGCGGCG 354358
Query 75272 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 75330
| ||||| ||| || | |||||| | | |||| |||| || || | || || || ||
Sbjct 354359 ATCGAGACGTACAACTACATGTCCAACAAGTAT-TTCACACATGCTTCGCCGACGCTGTT 354417
Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390
|| ||||| ||||| | | || | | |||||||| |||| || ||||| ||
Sbjct 354418 CAGCGCTGGCACACCTCAAGCACAACTTGCTTCATGCTTCCTGATCGACATGAAGGACGA 354477
Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450
| || | || || || | || || | | |||||| ||||| || || ||
Sbjct 354478 CAGCATTGAGGGCATTTACGACACGCTGAAGACTTGTGCGATGATCTCGAAAAACGCCGG 354537
Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTA--TTCGGGGGACA 75508
|| || || | || ||| | | || | | |||||| || ||| |||
Sbjct 354538 TGGCATCGGACTCAACGCACATCGCATTCGGGCGACTGG--CTCGTACATTGCGGGTACA 354595
Query 75509 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 75568
||||| |||| | ||| | | || ||||| || || || ||| ||| || | |||
Sbjct 354596 AATGGCACATCAAACGGTCTCGTACCCATGCTACGGGTGTTCAACAACACTGCTAGGTAT 354655
Query 75569 GTAAATCAAGCGGGGCGTC--GCAAGGGGTC-CAT-CGCGGTCTACTTGGAACCATGGCA 75624
|| | || | | ||| | || | | | ||| ||| ||||| | || || |||||
Sbjct 354656 GTCGACCAGG-GTGGCAACAAGCGACCCGGCGCATTCGCCATCTACCTCGAGCCGTGGCA 354714
Query 75625 TGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTG 75684
|| || ||| || |||||||| | || ||||| || | || |||| ||
Sbjct 354715 CGCAGACATCTTGTCCTTCCTTGACCTGCGCAAGAACCACGGCAAGGAGGAGGTCCGCGC 354774
Query 75685 TAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGG 75744
| | || | || | | |||||||| || || || ||||||||||| || | ||
Sbjct 354775 TCGTGACTTGTTCTACGCTCTGTGGATCCCTGATCTCTTCATGAAGCGTGTGCAAGATAA 354834
Query 75745 TGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGA 75804
| | | ||| | || | || || || || || || || |||| | | || ||
Sbjct 354835 CGCTGATTGGACACTGATGTGCCCGAACGAGTGCCCCGGCCTTGCCGATGTGTACGGGGA 354894
Query 75805 GGAGTTTGAAGCCCTCTACACAAAGTATG-AAGAGGAGGGTAGAGCCAATGCGACTGTAC 75863
||||| ||||| ||||||||| ||| | ||| | ||| || | || |||| | |
Sbjct 354895 TGAGTTCGAAGCGCTCTACACACGGTACGAAAGCGAAGGCAAGGG----TGAGACTATGC 354950
Query 75864 CAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATAT 75922
||| | || | ||||| | || |||||| | | ||||| |||||||| | || ||
Sbjct 354951 GCGCC-CAGAAGATTTGGTATGCCATTCTCGAGGCTCAGACCGAGACTGGCAACCCGTAC 355009
Query 75923 ATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAG 75982
||||| ||||| || ||| ||| ||||| ||||| ||||| ||||| |||||
Sbjct 355010 ATGCTGTACAAAGACGCTGCCAACCGCAAGAGCAACCAGAAGAACTTGGGCACAATTCGC 355069
Query 75983 AGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGC 76042
||||| || | ||||| || || | |||||||| | | || || ||||| |||
Sbjct 355070 AGCTCCAACTTGTGCACCGAGATCATCGAGTACACCGCTCCTGACGAAGTAGCTGTGTGC 355129
Query 76043 AATTTGGCATC 76053
|| | |||||
Sbjct 355130 AACCTTGCATC 355140
>seq112
Length=1778705
Score = 131 bits (144), Expect = 2e-25
Identities = 338/502 (67%), Gaps = 16/502 (3%)
Strand=Plus/Plus
Query 65023 AAGAAGGCGAAATGGGCAATGAAATGGTTTGAC-ACAAAGTCTCGCTCCTTCGCCGAGCG 65081
|||||||| || |||||| | || ||| | | || | | ||| |||||| | ||
Sbjct 1416656 AAGAAGGCTAACTGGGCACTAAAGTGGATCAGCGACGACGCATCGA-CCTTCGGCTGCCG 1416714
Query 65082 CCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTA 65141
||| | || || || ||| |||||||||||||||||||| || ||| || || |
Sbjct 1416715 TCTTATCGCCTTCGCAGCTGTTGAGGGTATCTTCTTCTCCGGCTCCTTCGCTGCCATCTT 1416774
Query 65142 TTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCG 65201
||| | |||||||| || |||||||| ||||| ||||| ||||| || || || ||
Sbjct 1416775 CTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCTCACGTTCTCTAATGAGCTCATCTCGCG 1416834
Query 65202 AGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAG-AC-TTTGCGTAATAGA 65259
|| ||||| | ||| || |||||| || | || || | || | | || || | |
Sbjct 1416835 TGACGAGGGCATGCACACCGACTTTGCC-TGCA-TGCTGCACGCACATCTCCGCAACA-A 1416891
Query 65260 CCCACTAC-CGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGATTGAGAAAGGGTT 65318
||| || ||| ||||| ||| | | ||||| || ||||| ||| ||| |||
Sbjct 1416892 GCCATCACTCGACCTCGTCCACCAGATCATCACCGAGGCCGTCGAGATCGAGCAAGAGTT 1416951
Query 65319 CATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAGATGTCCGAGTA 65378
| | | |||||| || || || || |||| |||||| | || |||| | ||||
Sbjct 1416952 CCTATCGGACGCCCTGCCCTGCGCACTTCTCGGCATGAACGCCAAGCTCATGTGCCAGTA 1417011
Query 65379 CATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGTGCCAC--CCATT--TGGA 65434
||| |||| ||| | || ||||| ||| | | | ||||| | | | | |
Sbjct 1417012 CATCGAGTTTGTCGCTGACCGTCTACTCCTCGCACTCG----GCCACAGCAAGTACTACA 1417067
Query 65435 ACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCAACTTCT 65494
| || | || || || ||||| ||||| ||||| ||| | || ||||| |||||||
Sbjct 1417068 ATGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGCCGGCAAGACAAACTTCT 1417127
Query 65495 TTGAGAAGCGAGTTGGGGACTA 65516
| |||||||| || || |||||
Sbjct 1417128 TCGAGAAGCGCGTAGGTGACTA 1417149
>seq188
Length=510084
Score = 86.0 bits (94), Expect = 7e-12
Identities = 187/273 (68%), Gaps = 8/273 (3%)
Strand=Plus/Plus
Query 175231 GAGATTGTGGATTTTCTCAAGCAACCCGAGAGATATTTTGGAAGTGGTGCCAAGATCCCC 175290
||| ||||| | || | ||||||||||||| | | | ||| || ||||| ||
Sbjct 119065 GAGTTTGTGCAATTCTTGAAGCAACCCGAGATCTTCACTAAACTTGGCGCGAAGATTCCA 119124
Query 175291 CGAGGCGCCCTTCTC-GCGGGTAAGCCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCAT 175349
|||||||| |||| |||| | || ||||| || ||||| | ||||| |||||
Sbjct 119125 CGAGGCGCGATTCTGAGCGGACCA-CCTGGTACTGGTAAGACGTTGCTCGCAAAAGCCAC 119183
Query 175350 CGCGGGTGAATCAAATGTCCCATTCATCCA-GTGCTCTGCCGCAAACTTTGTGGAGATGT 175408
|| |||||||| ||| || ||| || ||| || | | | || ||||||||||
Sbjct 119184 GGCCGGTGAATCTGGTGTGCCCTTCTTCAGCGTG-TCAGGGTCCGAATTCGTGGAGATGT 119242
Query 175409 TTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCCCGCGAAAATCAAC 175468
|||||||||| ||| | | || || || || || | | || || ||| || ||
Sbjct 119243 TTGTTGGTGTCGGTCCTTCCCGTGTGCGAGACCTGTTCGCCAATGCACG--AAAGTCGAC 119300
Query 175469 --CATGTATTGTCTTCATTGATGAGATTGATGC 175499
|||| || |||||||||||||||| |||||
Sbjct 119301 ACCATGCATCATCTTCATTGATGAGATCGATGC 119333
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596567608948960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |