Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20antarcticum_20[genbank_20GCA_5F002077065.1_20201
7-04-03] 267 sequences; 47,410,550 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq198 152 5e-32
seq184 95.1 1e-14
seq228 89.7 5e-13
>seq198
Length=398492
Score = 152 bits (168), Expect = 5e-32
Identities = 1103/1756 (63%), Gaps = 77/1756 (4%)
Strand=Plus/Minus
Query 138286 ATGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATCAATGGCCATGTTAATTAAA 138345
||||| | |||||| |||||||||||| ||||| ||||| | ||| | || |
Sbjct 355929 ATGTTCAGCGATTGGGACTGATCGATGAAGGCGCCACGATCGGCTGACATCTGGATGA-- 355872
Query 138346 TTTTTACTTT---TCATCTCCCACACGGTCTTGTATAGATCACGAATAT-GTCGCGG-TA 138400
| || | | | |||||||| || ||||| || || || || | |||| || ||
Sbjct 355871 -TGTTGCGCTGGCTGATCTCCCAGACAGTCTTATACAGCTCCTTGATCTCGTCGGGGATA 355813
Query 138401 TTGTTGCAATATTTTGAAT---GCTCCCGTTGGCCGCAATGATGCGATTTCTCATGTCAT 138457
||| | ||| || || || || | | || |||||||| || |||||| |
Sbjct 355812 TTG--GGAATGCGCTGGATAGAGCCACCAT---CTGCGATGATGCGGTTCTTCATGTTGT 355758
Query 138458 CGTTGTACAGATTCAACTTGATCAAGTCGTTTATCAGATATCTGTTTATGACCTGAAATT 138517
|| | | || || | || | ||| || | ||| | ||| | ||| || || |
Sbjct 355757 CGCTCCAGAGGCCCATGTCGACAAGGTCCTTGAGCAGCCAGGGGTTGACGACTTGGAACT 355698
Query 138518 CACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAACGATTCGTTGT 138577
| ||||||| || |||||| ||| |||||| ||||| | |||||||| | || |||
Sbjct 355697 CGCCGGCCAGGACACGACGAGAGTAGATGTTGCTGGTGTACGGCTCAAAGCACTCATTGA 355638
Query 138578 TTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGAGAATTCCGTA 138637
|||| ||||| | ||| | || || ||||| ||| || | ||||| || || |
Sbjct 355637 ACCCCATGATCTGCGATGTGCTTGCTGTGGGCATAGGCGCGACGAGCAGAGAGTTGCGGA 355578
Query 138638 AACCGTGAAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCACAAATCGCTAGGTTTTT 138697
|| || | ||| || ||||||| | ||| |||||||| || | ||| |
Sbjct 355577 CGCCATGCACTGCGATCCGCGCCTTGAGGGCTTCCCAATCCCACAAGTCAGTGGGTGTCA 355518
Query 138698 TGTTCCACATATCGTACTGTAACATTCCC----AAACTTGCGGGACTGCCTTCGTACGAA 138753
|||||| ||||| || | | ||| ||| || |||| ||| ||| |
Sbjct 355517 CACCCCACATGTCGTATTGGAGCTCGCCCTGTGAAA--TGGGGGA--GCCAGGGTAAGTC 355462
Query 138754 TCGTATACACCAAACTCTTGCGCCAACTCGT----TGCTCGCCTCGAGCGCACCATAGTA 138809
||||| |||| || | || | ||| |||| | || || | | |||
Sbjct 355461 TCGTAAGGGCCAAGCTTCTCAGCGAGATCGCAAGATGCTGTC----AGTGCGGCGTGGTA 355406
Query 138810 AATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTACGGCATGCG 138869
|| || ||| |||||||||||||| | || || || |||| | ||||||||
Sbjct 355405 GATGGTCTCGAAGATCTGCTGATTGAGGAGACGAGCTTCCTTCGACTCGAATGGCATGCG 355346
Query 138870 GAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGATGGCGCAG 138929
|| ||| ||||| ||||| || || |||| |||| || | || ||||
Sbjct 355345 CAGAGAGAGGAAGGCGTCAGCCAGACCGCTGACACCCAGACCGATTGGCCTGTGTCGCAT 355286
Query 138930 ATTTGACGCTTTTGCG-GCTTCGATA---GGATAATAGTTTACATCGATGATTTTGTTTA 138985
|| ||| ||||| ||||| || || || | ||| || |||||||| ||||| |
Sbjct 355285 GTT----GCTGTTGCGAGCTTCAATCACTGGGTACTTGTTAACTTCGATGATCTTGTTCA 355230
Query 138986 AATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGTTCAAAATCGTATGTGCCCCCGT 139045
| || || ||| || | || | | || | || ||||| || | |
Sbjct 355229 AGTTGCGAGTGACTACTTGTGTGACCTCGTGCAACTTCTTGAAGTCGTAGGTCTGCTTCT 355170
Query 139046 TGTCGTCGACG-ACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGCACACCGCC 139104
||||||| | || | || | | || | || || | ||||||||| ||
Sbjct 355169 GAATGTCGACGTATGTAGGCAGA------GCCAGAGAT----GCAAGGTTGCACACAGCT 355120
Query 139105 ACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTTGATCGTA 139164
|||||||| || || |||| |||| || |||| ||||| || | || ||
Sbjct 355119 ACTTCGTCAGGAGCGGTGTACTCGATGATCTCGGTGCACAAGTTGGAGCTGCGAATTGTG 355060
Query 139165 CCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTG 139224
|| || || | || ||||| || ||||| ||| |||||||| ||||| ||||| ||
Sbjct 355059 CCCAAGTTCTTCTGGTTGCTCTTGCGGTTGGCAGCGTCTTTGTACAGCATGTACGGGTTG 355000
Query 139225 CCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAAGTCC-CTAG-CTTGTATTTGAC 139282
||||| || || | ||| | |||| | | ||| || || | | | || | |
Sbjct 354999 CCAGTCTCGGTCTGAGCCTCGAGAATGGCAT--ACCAAATCTTCTGGGCGCGCATA-GTC 354943
Query 139283 GCACGTAAAGTT--CGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAATCGTTCACCGTA 139340
||| || | |||| |||||| | |||||| | ||||| || |||||
Sbjct 354942 TCACCC----TTGCCTTCGCTTTCGTACCGTGTGTAGAGCGCTTCGAACTCATCCCCGTA 354887
Query 139341 GGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATACGCCGTTCGCCTT 139400
| || | ||| || | |||| || || ||||| || | ||| | |||| | |
Sbjct 354886 CACATCGGCAAGGCCGGGGCACTCGTTCGGGCACATCAGTGTCCAATCAGCGTTATCTTG 354827
Query 139401 GACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTT 139460
|| ||| ||||||| ||||| || ||||||| |||| | | ||| || || ||
Sbjct 354826 CACACGCTTCATGAAGAGATCAGGGATCCACAGAGCGTAGAACAAGTCACGAGCGCGGAC 354767
Query 139461 ATCTTCCGAACCCATGTTACGTTTCATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGG 139520
|| ||| || ||| || || |||||| || | ||| |||||||| ||
Sbjct 354766 CTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAAGGACAAGATGTCTGCGTGCCACGG 354707
Query 139521 TTCCAGATAGATGGCCATTGCGCCTTTCCGTTTG---CCACCTTGATCGACGTGTCGTAC 139577
|| || |||||||| | |||||| || ||| ||||| || ||||| | | |
Sbjct 354706 CTCGAGGTAGATGGCGAATGCGCCGGGTCGCTTGTTGCCACCCTGGTCGACATACCTAGC 354647
Query 139578 AGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGT----GC 139633
|| || ||||| || || | ||| || | |||||| | | ||| || || || ||
Sbjct 354646 AGTGTTGTTGAACACCCGTAGCATGGGTACGAGACCGTTTGATGTGCCATTTGTACCCGC 354587
Query 139634 TACGGATGGGACTGTTGCGAGCTCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAA 139693
| | | | | | || || || | | |||| | |||| ||||| || ||| |
Sbjct 354586 AATGTACGAGCCAGTCGCC----CGAATGCGATGTGCGTTGAGTCCGATGCCACCGGCGT 354531
Query 139694 ATTTGGATATTAAAACGCAATCGCGTAATGTCTCGTATATACCTCTTATGCTGTCGTCCT 139753
||| || || | | ||| | || ||||| || || |||||||||||||
Sbjct 354530 TTTTCGAGATCATCGCACAAGTCTTCAGCGTGTCGTAAATGCCCTCAATGCTGTCGTCCT 354471
Query 139754 GCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAG 139813
||| || ||| |||||||| | |||||| | | | ||||| || ||||| |
Sbjct 354470 TCATGTCGATCAGGAAGCATGAAGCAAGTTGTGCTTGAGGTGTGCCAGCGCTGAACAGCG 354411
Query 139814 TAGGACTCGCGTGCGTG-AACATTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCTC 139872
| || || || ||| || | ||| || ||||| | | |||||| ||||| || | |
Sbjct 354410 TCGGCGAAGCATGTGTGAAATACTTG-TTGGACATGTAGTTGTACGTCTCGATCGC-CGC 354353
Query 139873 A-CAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGCATATGTTGGATCCGTTC 139931
| |||| ||| ||||| ||||| |||| ||| ||||| | ||| || || || ||
Sbjct 354352 ATCAATGTCCTCGCCGTGTATACCTACAGCGACACGCATGATCATGTGCTGTGGCCTCTC 354293
Query 139932 GGCCACCGCGCCCTCGAtttttttCAGATAACCGTTCTCTAGGGTCTTGTAGCCAAAGTA 139991
|||||| || || || |||||| | ||| || |||||| |||| |||||
Sbjct 354292 CGCCACCTTCCCGTCAATGCGGAGCAGATATGAGCGCTCCAGCGTCTTGAAGCCGAAGTA 354233
Query 139992 CCTATAGTTGAAATCG 140007
| |||||||| |||
Sbjct 354232 CTGGTAGTTGAAGTCG 354217
>seq184
Length=1511567
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || ||||| ||||| || || || || ||||| || || | ||
Sbjct 735927 ATGCAGATCTTCGTCAAGACGCTCACCGGCAAGACCATCACCCTCGAGGTTGAGTCATCC 735868
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| || || || ||||| || |||
Sbjct 735867 GACACCATCGACAACGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCTCCAGACCAA 735808
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || | || || ||||| || || || ||||| | | | || || ||||||
Sbjct 735807 CAGCGCCTCATTTTCGCCGGCAAGCAACTCGAGGACGGCCGCACTCTTTCCGACTATAAC 735748
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| || ||||| ||||| || ||| | || | || | ||||| ||
Sbjct 735747 ATCCAGAAGGAGTCGACTCTCCACCTCGTCCTTCGCCTCCGCGGTGG 735701
Score = 82.4 bits (90), Expect = 7e-11
Identities = 131/188 (70%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACG 24778
||||| | ||||| || || || || || || || || | ||||||| | || |
Sbjct 736140 AAAACCTTGACCGGCAAGACCATCACCCTTGAGGTGGAGAGCTCCGACACCATCGACAAT 736081
Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838
|| || |||||||||||||| || || || ||||| || || || || ||||||||
Sbjct 736080 GTCAAGAGCAAGATCCAAGACAAGGAGGGCATTCCTCCAGACCAGCAGCGCTTGATCTTC 736021
Query 24839 GCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCG 24898
||||| || ||||| |||||| | | | | || || || ||||| || || || ||
Sbjct 736020 GCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTACAACATCCAGAAAGAGTCC 735961
Query 24899 ACACTACA 24906
|| || ||
Sbjct 735960 ACCCTTCA 735953
>seq228
Length=1254254
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || || || || || || || || ||||| || || || ||
Sbjct 556012 ATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACCCTCGAGGTTGAGTCCTCC 555953
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| || || || || || ||||| || ||
Sbjct 555952 GACACCATCGACAACGTGAAGTCGAAGATCCAGGATAAGGAGGGTATTCCTCCAGACCAG 555893
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || | ||||| ||||| || ||||| ||||| | | | || || || |||
Sbjct 555892 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGTCGTACTCTTTCCGACTACAAC 555833
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| || ||||||||||| || ||| | || | || | ||||| ||
Sbjct 555832 ATCCAGAAGGAATCGACTCTCCACCTCGTCCTTCGCCTCCGCGGTGG 555786
Score = 89.7 bits (98), Expect = 5e-13
Identities = 127/179 (71%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 24728 ACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAA 24787
||||| || || || || || || || || | ||||||| | || | || ||
Sbjct 556216 ACCGGCAAGACCATCACCCTTGAGGTGGAGAGCTCCGACACCATCGACAATGTCAAGAGC 556157
Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847
||||||||||||||||| || || || || || || || || |||||||| ||||| ||
Sbjct 556156 AAGATCCAAGACAAAGAGGGCATCCCGCCAGACCAGCAGCGCTTGATCTTCGCCGGCAAG 556097
Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACA 24906
||||| |||||| | | | | || ||||| ||||| || ||||| || || || ||
Sbjct 556096 CAGCTCGAGGATGGCCGCACCCTCTCCGATTACAACATCCAGAAGGAGTCCACCCTCCA 556038
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449896098466760
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