Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rachicladosporium_20antarcticum_20[genbank_20GCA_5F002077065.1_20201 7-04-03] 267 sequences; 47,410,550 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq198 152 5e-32 seq184 95.1 1e-14 seq228 89.7 5e-13 >seq198 Length=398492 Score = 152 bits (168), Expect = 5e-32 Identities = 1103/1756 (63%), Gaps = 77/1756 (4%) Strand=Plus/Minus Query 138286 ATGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATCAATGGCCATGTTAATTAAA 138345 ||||| | |||||| |||||||||||| ||||| ||||| | ||| | || | Sbjct 355929 ATGTTCAGCGATTGGGACTGATCGATGAAGGCGCCACGATCGGCTGACATCTGGATGA-- 355872 Query 138346 TTTTTACTTT---TCATCTCCCACACGGTCTTGTATAGATCACGAATAT-GTCGCGG-TA 138400 | || | | | |||||||| || ||||| || || || || | |||| || || Sbjct 355871 -TGTTGCGCTGGCTGATCTCCCAGACAGTCTTATACAGCTCCTTGATCTCGTCGGGGATA 355813 Query 138401 TTGTTGCAATATTTTGAAT---GCTCCCGTTGGCCGCAATGATGCGATTTCTCATGTCAT 138457 ||| | ||| || || || || | | || |||||||| || |||||| | Sbjct 355812 TTG--GGAATGCGCTGGATAGAGCCACCAT---CTGCGATGATGCGGTTCTTCATGTTGT 355758 Query 138458 CGTTGTACAGATTCAACTTGATCAAGTCGTTTATCAGATATCTGTTTATGACCTGAAATT 138517 || | | || || | || | ||| || | ||| | ||| | ||| || || | Sbjct 355757 CGCTCCAGAGGCCCATGTCGACAAGGTCCTTGAGCAGCCAGGGGTTGACGACTTGGAACT 355698 Query 138518 CACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAACGATTCGTTGT 138577 | ||||||| || |||||| ||| |||||| ||||| | |||||||| | || ||| Sbjct 355697 CGCCGGCCAGGACACGACGAGAGTAGATGTTGCTGGTGTACGGCTCAAAGCACTCATTGA 355638 Query 138578 TTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGAGAATTCCGTA 138637 |||| ||||| | ||| | || || ||||| ||| || | ||||| || || | Sbjct 355637 ACCCCATGATCTGCGATGTGCTTGCTGTGGGCATAGGCGCGACGAGCAGAGAGTTGCGGA 355578 Query 138638 AACCGTGAAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCACAAATCGCTAGGTTTTT 138697 || || | ||| || ||||||| | ||| |||||||| || | ||| | Sbjct 355577 CGCCATGCACTGCGATCCGCGCCTTGAGGGCTTCCCAATCCCACAAGTCAGTGGGTGTCA 355518 Query 138698 TGTTCCACATATCGTACTGTAACATTCCC----AAACTTGCGGGACTGCCTTCGTACGAA 138753 |||||| ||||| || | | ||| ||| || |||| ||| ||| | Sbjct 355517 CACCCCACATGTCGTATTGGAGCTCGCCCTGTGAAA--TGGGGGA--GCCAGGGTAAGTC 355462 Query 138754 TCGTATACACCAAACTCTTGCGCCAACTCGT----TGCTCGCCTCGAGCGCACCATAGTA 138809 ||||| |||| || | || | ||| |||| | || || | | ||| Sbjct 355461 TCGTAAGGGCCAAGCTTCTCAGCGAGATCGCAAGATGCTGTC----AGTGCGGCGTGGTA 355406 Query 138810 AATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTACGGCATGCG 138869 || || ||| |||||||||||||| | || || || |||| | |||||||| Sbjct 355405 GATGGTCTCGAAGATCTGCTGATTGAGGAGACGAGCTTCCTTCGACTCGAATGGCATGCG 355346 Query 138870 GAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGATGGCGCAG 138929 || ||| ||||| ||||| || || |||| |||| || | || |||| Sbjct 355345 CAGAGAGAGGAAGGCGTCAGCCAGACCGCTGACACCCAGACCGATTGGCCTGTGTCGCAT 355286 Query 138930 ATTTGACGCTTTTGCG-GCTTCGATA---GGATAATAGTTTACATCGATGATTTTGTTTA 138985 || ||| ||||| ||||| || || || | ||| || |||||||| ||||| | Sbjct 355285 GTT----GCTGTTGCGAGCTTCAATCACTGGGTACTTGTTAACTTCGATGATCTTGTTCA 355230 Query 138986 AATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGTTCAAAATCGTATGTGCCCCCGT 139045 | || || ||| || | || | | || | || ||||| || | | Sbjct 355229 AGTTGCGAGTGACTACTTGTGTGACCTCGTGCAACTTCTTGAAGTCGTAGGTCTGCTTCT 355170 Query 139046 TGTCGTCGACG-ACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGCACACCGCC 139104 ||||||| | || | || | | || | || || | ||||||||| || Sbjct 355169 GAATGTCGACGTATGTAGGCAGA------GCCAGAGAT----GCAAGGTTGCACACAGCT 355120 Query 139105 ACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTTGATCGTA 139164 |||||||| || || |||| |||| || |||| ||||| || | || || Sbjct 355119 ACTTCGTCAGGAGCGGTGTACTCGATGATCTCGGTGCACAAGTTGGAGCTGCGAATTGTG 355060 Query 139165 CCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTG 139224 || || || | || ||||| || ||||| ||| |||||||| ||||| ||||| || Sbjct 355059 CCCAAGTTCTTCTGGTTGCTCTTGCGGTTGGCAGCGTCTTTGTACAGCATGTACGGGTTG 355000 Query 139225 CCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAAGTCC-CTAG-CTTGTATTTGAC 139282 ||||| || || | ||| | |||| | | ||| || || | | | || | | Sbjct 354999 CCAGTCTCGGTCTGAGCCTCGAGAATGGCAT--ACCAAATCTTCTGGGCGCGCATA-GTC 354943 Query 139283 GCACGTAAAGTT--CGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAATCGTTCACCGTA 139340 ||| || | |||| |||||| | |||||| | ||||| || ||||| Sbjct 354942 TCACCC----TTGCCTTCGCTTTCGTACCGTGTGTAGAGCGCTTCGAACTCATCCCCGTA 354887 Query 139341 GGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATACGCCGTTCGCCTT 139400 | || | ||| || | |||| || || ||||| || | ||| | |||| | | Sbjct 354886 CACATCGGCAAGGCCGGGGCACTCGTTCGGGCACATCAGTGTCCAATCAGCGTTATCTTG 354827 Query 139401 GACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTT 139460 || ||| ||||||| ||||| || ||||||| |||| | | ||| || || || Sbjct 354826 CACACGCTTCATGAAGAGATCAGGGATCCACAGAGCGTAGAACAAGTCACGAGCGCGGAC 354767 Query 139461 ATCTTCCGAACCCATGTTACGTTTCATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGG 139520 || ||| || ||| || || |||||| || | ||| |||||||| || Sbjct 354766 CTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAAGGACAAGATGTCTGCGTGCCACGG 354707 Query 139521 TTCCAGATAGATGGCCATTGCGCCTTTCCGTTTG---CCACCTTGATCGACGTGTCGTAC 139577 || || |||||||| | |||||| || ||| ||||| || ||||| | | | Sbjct 354706 CTCGAGGTAGATGGCGAATGCGCCGGGTCGCTTGTTGCCACCCTGGTCGACATACCTAGC 354647 Query 139578 AGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGT----GC 139633 || || ||||| || || | ||| || | |||||| | | ||| || || || || Sbjct 354646 AGTGTTGTTGAACACCCGTAGCATGGGTACGAGACCGTTTGATGTGCCATTTGTACCCGC 354587 Query 139634 TACGGATGGGACTGTTGCGAGCTCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAA 139693 | | | | | | || || || | | |||| | |||| ||||| || ||| | Sbjct 354586 AATGTACGAGCCAGTCGCC----CGAATGCGATGTGCGTTGAGTCCGATGCCACCGGCGT 354531 Query 139694 ATTTGGATATTAAAACGCAATCGCGTAATGTCTCGTATATACCTCTTATGCTGTCGTCCT 139753 ||| || || | | ||| | || ||||| || || ||||||||||||| Sbjct 354530 TTTTCGAGATCATCGCACAAGTCTTCAGCGTGTCGTAAATGCCCTCAATGCTGTCGTCCT 354471 Query 139754 GCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAG 139813 ||| || ||| |||||||| | |||||| | | | ||||| || ||||| | Sbjct 354470 TCATGTCGATCAGGAAGCATGAAGCAAGTTGTGCTTGAGGTGTGCCAGCGCTGAACAGCG 354411 Query 139814 TAGGACTCGCGTGCGTG-AACATTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCTC 139872 | || || || ||| || | ||| || ||||| | | |||||| ||||| || | | Sbjct 354410 TCGGCGAAGCATGTGTGAAATACTTG-TTGGACATGTAGTTGTACGTCTCGATCGC-CGC 354353 Query 139873 A-CAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGCATATGTTGGATCCGTTC 139931 | |||| ||| ||||| ||||| |||| ||| ||||| | ||| || || || || Sbjct 354352 ATCAATGTCCTCGCCGTGTATACCTACAGCGACACGCATGATCATGTGCTGTGGCCTCTC 354293 Query 139932 GGCCACCGCGCCCTCGAtttttttCAGATAACCGTTCTCTAGGGTCTTGTAGCCAAAGTA 139991 |||||| || || || |||||| | ||| || |||||| |||| ||||| Sbjct 354292 CGCCACCTTCCCGTCAATGCGGAGCAGATATGAGCGCTCCAGCGTCTTGAAGCCGAAGTA 354233 Query 139992 CCTATAGTTGAAATCG 140007 | |||||||| ||| Sbjct 354232 CTGGTAGTTGAAGTCG 354217 >seq184 Length=1511567 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || ||||| ||||| || || || || ||||| || || | || Sbjct 735927 ATGCAGATCTTCGTCAAGACGCTCACCGGCAAGACCATCACCCTCGAGGTTGAGTCATCC 735868 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || ||||| || ||| Sbjct 735867 GACACCATCGACAACGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCTCCAGACCAA 735808 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || | || || ||||| || || || ||||| | | | || || |||||| Sbjct 735807 CAGCGCCTCATTTTCGCCGGCAAGCAACTCGAGGACGGCCGCACTCTTTCCGACTATAAC 735748 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| ||||| || ||| | || | || | ||||| || Sbjct 735747 ATCCAGAAGGAGTCGACTCTCCACCTCGTCCTTCGCCTCCGCGGTGG 735701 Score = 82.4 bits (90), Expect = 7e-11 Identities = 131/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACG 24778 ||||| | ||||| || || || || || || || || | ||||||| | || | Sbjct 736140 AAAACCTTGACCGGCAAGACCATCACCCTTGAGGTGGAGAGCTCCGACACCATCGACAAT 736081 Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838 || || |||||||||||||| || || || ||||| || || || || |||||||| Sbjct 736080 GTCAAGAGCAAGATCCAAGACAAGGAGGGCATTCCTCCAGACCAGCAGCGCTTGATCTTC 736021 Query 24839 GCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCG 24898 ||||| || ||||| |||||| | | | | || || || ||||| || || || || Sbjct 736020 GCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTACAACATCCAGAAAGAGTCC 735961 Query 24899 ACACTACA 24906 || || || Sbjct 735960 ACCCTTCA 735953 >seq228 Length=1254254 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || || || || ||||| || || || || Sbjct 556012 ATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACCCTCGAGGTTGAGTCCTCC 555953 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| || || || || || ||||| || || Sbjct 555952 GACACCATCGACAACGTGAAGTCGAAGATCCAGGATAAGGAGGGTATTCCTCCAGACCAG 555893 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || | ||||| ||||| || ||||| ||||| | | | || || || ||| Sbjct 555892 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGTCGTACTCTTTCCGACTACAAC 555833 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||||||||| || ||| | || | || | ||||| || Sbjct 555832 ATCCAGAAGGAATCGACTCTCCACCTCGTCCTTCGCCTCCGCGGTGG 555786 Score = 89.7 bits (98), Expect = 5e-13 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 24728 ACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAA 24787 ||||| || || || || || || || || | ||||||| | || | || || Sbjct 556216 ACCGGCAAGACCATCACCCTTGAGGTGGAGAGCTCCGACACCATCGACAATGTCAAGAGC 556157 Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 ||||||||||||||||| || || || || || || || || |||||||| ||||| || Sbjct 556156 AAGATCCAAGACAAAGAGGGCATCCCGCCAGACCAGCAGCGCTTGATCTTCGCCGGCAAG 556097 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACA 24906 ||||| |||||| | | | | || ||||| ||||| || ||||| || || || || Sbjct 556096 CAGCTCGAGGATGGCCGCACCCTCTCCGATTACAACATCCAGAAGGAGTCCACCCTCCA 556038 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449896098466760