Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rachicladosporium_20antarcticum_20[genbank_20GCA_5F002077065.1_20201 7-04-03] 267 sequences; 47,410,550 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq228 143 2e-29 seq184 141 8e-29 >seq228 Length=1254254 Score = 143 bits (158), Expect = 2e-29 Identities = 216/305 (71%), Gaps = 4/305 (1%) Strand=Plus/Minus Query 34321 GTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGG 34380 ||||| || || | ||| ||| || ||||| |||||| ||| || ||||| || || Sbjct 206415 GTCTCGGGATTCTTACAGTCCTTGCATAACACGAACTTGGCGATAAAGCCATCGAGATGG 206356 Query 34381 TCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATCG 34440 ||||| | || || ||||| | |||||||| ||| | || |||| ||| ||| Sbjct 206355 TCCTGCAGTTTGCTGGCTTCGTGAGCGCCGTTGATGATCCAGCGATCGTCCTTGGGGTCG 206296 Query 34441 ACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACGT 34500 | | || |||||||| || ||| | ||||| ||||| || ||| | | || || Sbjct 206295 ATGTTGGTCTGCGCGCCAAGTTCGAAGCCGAAATACTTGATCACGTAGTTCGGGGGCCGG 206236 Query 34501 CCAAGCGCCTTGGCGA--TTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCT 34558 ||||| | |||| || | | | |||||||||||| ||||||||||||||||| | Sbjct 206235 GCAAGCTGGTGCGCGACATTACTG--AGGTTGACGATGACGGTCTTGATGCCGTTGCCTT 206178 Query 34559 TTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACAT 34618 | ||||| || |||| ||||||| ||| |||||||||||||| | ||||| | || Sbjct 206177 TGCCTTCCACTTTGGACTGGATGCGCTCCATCTTGTAGCGGTAGAAGGGATCCGCGATAT 206118 Query 34619 TGCGG 34623 |||| Sbjct 206117 CGCGG 206113 >seq184 Length=1511567 Score = 141 bits (156), Expect = 8e-29 Identities = 223/317 (70%), Gaps = 7/317 (2%) Strand=Plus/Plus Query 34309 ACGATGAGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAA 34368 ||||||| | ||||| || || | || ||| ||| | ||| |||||| ||| || Sbjct 993588 ACGATGA---CGGTCTCGGGATTCTTGCAGTCCTTACAGAGCACGAACTTGGCGATAAAG 993644 Query 34369 CCATCAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCG 34428 ||||| || ||||||| | || || || || | ||||||| ||| | || ||| Sbjct 993645 CCATCCAGATGGTCCTGCAGTTTGCTGGCTTCATGAGCACCGTTGATGATCCAGCGATCG 993704 Query 34429 TTTTTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAA 34488 | || |||| | || |||||||| || ||| | ||||||||||| || ||| Sbjct 993705 TCCTTAGGGTCGATGTTGGTCTGCGCGCCGAGTTCGAAGCCGAAGTACTTGATCACGTAG 993764 Query 34489 ATGGCCGGACGTCCAAGCGCCTTGGCGA--TTTCGGGCATGTTGACGATGACAGTCTTGA 34546 ||| ||| ||| ||||| | |||| || | | | |||||||||||| || |||| Sbjct 993765 TTGGGCGGGCGTGCAAGCTGGTGCGCGACATTACTG--AGGTTGACGATGACGGTTTTGA 993822 Query 34547 TGCCGTTGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACG 34606 |||||||||| || ||||| || |||| ||||||| ||| |||||||||||||| | Sbjct 993823 TGCCGTTGCCTTTGCCTTCCACTTTGGACTGGATGCGCTCCATCTTGTAGCGGTAGAAGG 993882 Query 34607 CGTCCGCCACATTGCGG 34623 ||||| | || |||| Sbjct 993883 GATCCGCGATATCGCGG 993899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412840256587631