Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rachicladosporium_20antarcticum_20[genbank_20GCA_5F002077065.1_20201 7-04-03] 267 sequences; 47,410,550 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq228 107 2e-18 seq184 91.5 1e-13 >seq228 Length=1254254 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 |||||||| || ||||| ||| | |||||||| ||||| || |||| ||| | Sbjct 555784 ATGCAAATCTTCGTCAAGACTCTCACAGGCAAGACCATCACGCTCGAGGTGGAATCATCA 555725 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || ||| | | || || |||||| ||||| || || | || |||||| Sbjct 555724 GACACAATCGACAACGTGAAGTCGAAGATTCAGGATAAGGAGGGTATCCCACCAGATCAG 555665 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| | ||||| | || ||||| ||| ||||||||| | || || ||||||||| Sbjct 555664 CAGCGTCTTATCTTCGCTGGTAAGCAGTTGGAGGACGGCCGGACGTTGAGCGACTACAAC 555605 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 ||||| |||||||| ||| ||||| ||||| || | ||||| || || Sbjct 555604 ATTCAGAAGGAGTCGACGCTGCACTTGGTGCTGCGTTTGCGTGGAGG 555558 >seq184 Length=1511567 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||||||||| ||||| ||| | |||||||| ||||| || |||| ||| | Sbjct 735699 ATGCAAATTTTCGTCAAGACTCTCACAGGCAAGACCATCACGCTCGAGGTGGAATCATCA 735640 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || ||| | | || || |||||| ||||| || || | || || ||| Sbjct 735639 GACACGATCGACAACGTGAAGTCGAAGATTCAGGATAAGGAGGGTATCCCACCAGACCAG 735580 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| | || || | || || || ||| ||||||||| || || || ||||||||| Sbjct 735579 CAGCGTCTCATCTTCGCCGGGAAGCAGTTGGAGGACGGCAGGACTTTGAGCGACTACAAC 735520 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTG 107765 || || |||||||| ||| ||||| ||||| Sbjct 735519 ATCCAGAAGGAGTCGACGCTGCACTTGGTG 735490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398875502029963