Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20antarcticum_20[genbank_20GCA_5F002077065.1_20201
7-04-03] 267 sequences; 47,410,550 total letters
Query= NC_023848.1
Length=163023
Score E
Sequences producing significant alignments: (Bits) Value
seq183 89.7 5e-13
seq217 84.2 2e-11
>seq183
Length=685938
Score = 89.7 bits (98), Expect = 5e-13
Identities = 109/149 (73%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 21749 CCCGAAATAGGCGACAAGTTCTGTTCCGGCATGGCCCAGAAAGGCACCTGCGGGATGATC 21808
||| | || ||||||||||| |||| || | |||||||| ||| || || | |
Sbjct 169593 CCCCAGATCGGCGACAAGTTTGCTTCCCGCCACGGTCAGAAAGGTACCATTGGTATCACC 169534
Query 21809 TATTCGCAAGAAAACATGCCATTCACATCTTCCGGCATGACCCCCGACATCATCATCAAC 21868
||| |||||| ||||||| |||||| | ||||| |||||||||||||||||
Sbjct 169533 TATCGCCAAGAAGACATGCCCTTCACAGCCGATGGCATCGTTCCCGACATCATCATCAAT 169474
Query 21869 CCCAACTGCATTCCCTCCAGAATGACCAT 21897
|| || |||||||||| | ||||||||
Sbjct 169473 CCTCACGCCATTCCCTCCCGCATGACCAT 169445
>seq217
Length=1262075
Score = 84.2 bits (92), Expect = 2e-11
Identities = 105/144 (73%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 21755 ATAGGCGACAAGTTCTGTTCCGGCATGGCCCAGAAAGGCACCTGCGGGATGATCTATTCG 21814
|| || ||||||||| ||| || | |||||||| || ||| || | |||
Sbjct 961052 ATTGGTGACAAGTTCGCCTCCCGCCACGGTCAGAAAGGTACAATCGGTATTACCTACCGC 961111
Query 21815 CAAGAAAACATGCCATTCACATCTTCCGGCATGACCCCCGACATCATCATCAACCCCAAC 21874
|||||| ||||||| |||||| | |||||| |||||||||||||||||||||| ||
Sbjct 961112 CAAGAAGACATGCCTTTCACAGCCGACGGCATCGTCCCCGACATCATCATCAACCCCCAC 961171
Query 21875 TGCATTCCCTCCAGAATGACCATT 21898
|| |||||| | ||||| |||
Sbjct 961172 GCTATCCCCTCCCGCATGACAATT 961195
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521543859341560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |