Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20antarcticum_20[genbank_20GCA_5F002077065.1_20201
7-04-03] 267 sequences; 47,410,550 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq176 84.2 5e-11
>seq176
Length=738521
Score = 84.2 bits (92), Expect = 5e-11
Identities = 215/327 (66%), Gaps = 3/327 (1%)
Strand=Plus/Plus
Query 110682 GGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGT 110741
|| || || || ||| || | || |||||| |||| || | |||||| | || || ||
Sbjct 358597 GGTCTCGTACCCATGCTACGGGTGTTCAACAACACGGCTAGATATGTCGACCAGGGCGGC 358656
Query 110742 AAGAGAAAT---GGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAA 110798
|| | | ||| | ||||| ||||| || || || ||||| |||| || ||
Sbjct 358657 AACAAGCGTCCCGGCGCGTTTGCCATCTACCTTGAGCCATGGCACGCAGACATCTTGTCG 358716
Query 110799 TTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTAT 110858
||| | || || ||||| || || || || || | || ||||| | || ||
Sbjct 358717 TTCCTCGACCTCCGTAAGAACCACGGCAAGGAGGAGGTTCGCGCTCGTGACCTGTTCTAC 358776
Query 110859 GCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTT 110918
||| |||||||| | ||| | |||||||||||||| ||||| || | ||| | |
Sbjct 358777 GCACTGTGGATTCCCGATCTCTTCATGAAACGTGTGCAAGACAACGCTGATTGGACATTG 358836
Query 110919 ATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTT 110978
||||| || | | ||| ||||| | || || || ||| | || ||||||| ||
Sbjct 358837 ATGTGCCCGAACGAGTGTCCCGGTCTTGCCGACGTTTACGGAGACGAATTTGAAGCGCTC 358896
Query 110979 TACGAAAAATATGAAAAAGAAGGCAAG 111005
||| ||| || | |||||||||
Sbjct 358897 TACACTCGATACGAGAGCGAAGGCAAG 358923
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186808739987587
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |