Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rachicladosporium_20antarcticum_20[genbank_20GCA_5F002077065.1_20201 7-04-03] 267 sequences; 47,410,550 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq176 84.2 5e-11 >seq176 Length=738521 Score = 84.2 bits (92), Expect = 5e-11 Identities = 215/327 (66%), Gaps = 3/327 (1%) Strand=Plus/Plus Query 110682 GGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGT 110741 || || || || ||| || | || |||||| |||| || | |||||| | || || || Sbjct 358597 GGTCTCGTACCCATGCTACGGGTGTTCAACAACACGGCTAGATATGTCGACCAGGGCGGC 358656 Query 110742 AAGAGAAAT---GGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAA 110798 || | | ||| | ||||| ||||| || || || ||||| |||| || || Sbjct 358657 AACAAGCGTCCCGGCGCGTTTGCCATCTACCTTGAGCCATGGCACGCAGACATCTTGTCG 358716 Query 110799 TTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTAT 110858 ||| | || || ||||| || || || || || | || ||||| | || || Sbjct 358717 TTCCTCGACCTCCGTAAGAACCACGGCAAGGAGGAGGTTCGCGCTCGTGACCTGTTCTAC 358776 Query 110859 GCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTT 110918 ||| |||||||| | ||| | |||||||||||||| ||||| || | ||| | | Sbjct 358777 GCACTGTGGATTCCCGATCTCTTCATGAAACGTGTGCAAGACAACGCTGATTGGACATTG 358836 Query 110919 ATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTT 110978 ||||| || | | ||| ||||| | || || || ||| | || ||||||| || Sbjct 358837 ATGTGCCCGAACGAGTGTCCCGGTCTTGCCGACGTTTACGGAGACGAATTTGAAGCGCTC 358896 Query 110979 TACGAAAAATATGAAAAAGAAGGCAAG 111005 ||| ||| || | ||||||||| Sbjct 358897 TACACTCGATACGAGAGCGAAGGCAAG 358923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186808739987587