Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rachicladosporium_20antarcticum_20[genbank_20GCA_5F002077065.1_20201 7-04-03] 267 sequences; 47,410,550 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq228 102 5e-17 seq184 87.8 1e-12 >seq228 Length=1254254 Score = 102 bits (112), Expect = 5e-17 Identities = 158/222 (71%), Gaps = 4/222 (2%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | || ||| | || | ||| || ||| ||| || || |||||||||||||| Sbjct 556013 ACCACCACGCAGACGGAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGA 556072 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| ||||| | || || | || || ||||| || ||||| |||||||| ||| |||| Sbjct 556073 GAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGCGG 556132 Query 33642 CACACCTTCTTTGTC-GGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | || |||||||| | | || || || |||| ||| | ||||||| ||| Sbjct 556133 GATGCCCTCTTTGTCTTGGATCTTGCTCTT--GACATTGTCGATGGTGTCGGAGCTCTCC 556190 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAG 33741 || |||| ||||| || || || || || || ||||| ||| Sbjct 556191 ACCTCAAGGGTGATGGTCTTGCCGGTCAAGGTCTTTACGAAG 556232 Score = 100 bits (110), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || || | |||||| | |||||| || || || ||| || || |||||||| ||| Sbjct 555558 CCTCCACGCAAACGCAGCACCAAGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCGCTC 555617 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 | || || |||| ||||| || || || || || || | ||||||||||||| | || Sbjct 555618 AACGTCCGGCCGTCCTCCAACTGCTTACCAGCGAAGATAAGACGCTGCTGATCTGGTGGG 555677 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||| || || || ||| ||| ||| || | ||| | ||||| ||||||||| Sbjct 555678 ATACCCTCCTTATCCTGAATCTTCGACTTC-ACGTTGTCGATTGTGTCTGATGATTCCAC 555736 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || | |||||| || || ||||| | || || || ||||| |||||| Sbjct 555737 CTCGAGCGTGATGGTCTTGCCTGTGAGAGTCTTGACGAAGATTTGCATA 555785 >seq184 Length=1511567 Score = 87.8 bits (96), Expect = 1e-12 Identities = 144/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || ||||| ||| || || ||||| || ||||| || ||||| |||| || | ||| Sbjct 735725 TGGAGAGTCGACTCCTTCTGGATGTTATAGTCGGAAAGAGTGCGGCCGTCCTCGAGTTGC 735784 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 || ||||| ||||| | ||||| || ||| | || | ||| || ||||| || ||| Sbjct 735785 TTGCCGGCGAAAATGAGGCGCTGTTGGTCTGGAGGAATACCCTCCTTGTCCTGGATCTTC 735844 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 || | | | ||| | ||||||| ||| || || || | ||||| || || || || Sbjct 735845 GACTTGA-CGTTGTCGATGGTGTCGGATGACTCAACCTCGAGGGTGATGGTCTTGCCGGT 735903 Query 33726 TAACGTTTTTACAAAGATCTGCATA 33750 | ||| || || |||||||||||| Sbjct 735904 GAGCGTCTTGACGAAGATCTGCATA 735928 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328702930376640