Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rachicladosporium_20antarcticum_20[genbank_20GCA_5F002077065.1_20201 7-04-03] 267 sequences; 47,410,550 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq184 109 1e-18 seq228 95.1 3e-14 >seq184 Length=1511567 Score = 109 bits (120), Expect = 1e-18 Identities = 138/190 (73%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || |||||||| || || ||||| | || |||||| || ||||| |||| Sbjct 735685 CAAGACTCTCACAGGCAAGACCATCACGCTCGAGGTGGAATCATCAGACACGATCGACAA 735626 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| |||||||| || || || || || || ||| || | || ||||| Sbjct 735625 CGTGAAGTCGAAGATTCAGGATAAGGAGGGTATCCCACCAGACCAGCAGCGTCTCATCTT 735566 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 |||||| ||||||||||| || || ||||||||| ||| |||||| ||||||| ||||| Sbjct 735565 CGCCGGGAAGCAGTTGGAGGACGGCAGGACTTTGAGCGACTACAACATCCAGAAGGAGTC 735506 Query 206364 TACTCTTCAC 206373 || || ||| Sbjct 735505 GACGCTGCAC 735496 Score = 91.5 bits (100), Expect = 3e-13 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 |||||| | || || || || ||||| | || ||||| || || ||||| |||| Sbjct 736141 CAAAACCTTGACCGGCAAGACCATCACCCTTGAGGTGGAGAGCTCCGACACCATCGACAA 736082 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| ||||| ||||| || || || ||| || ||| || | | ||||| Sbjct 736081 TGTCAAGAGCAAGATCCAAGACAAGGAGGGCATTCCTCCAGACCAGCAGCGCTTGATCTT 736022 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 |||||| |||||| | || ||||| | || | |||| |||||| ||||||||||||| Sbjct 736021 CGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTACAACATCCAGAAAGAGTC 735962 Query 206364 TACTCTTCACCTTGT 206378 || ||||| || || Sbjct 735961 CACCCTTCATCTCGT 735947 >seq228 Length=1254254 Score = 95.1 bits (104), Expect = 3e-14 Identities = 135/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || |||||||| || || ||||| | || |||||| || |||||| |||| Sbjct 555770 CAAGACTCTCACAGGCAAGACCATCACGCTCGAGGTGGAATCATCAGACACAATCGACAA 555711 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| |||||||| || || || || || || || || | |||||||| Sbjct 555710 CGTGAAGTCGAAGATTCAGGATAAGGAGGGTATCCCACCAGATCAGCAGCGTCTTATCTT 555651 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||| || ||||||||||| || || |||| ||| ||| |||||| | ||||| ||||| Sbjct 555650 CGCTGGTAAGCAGTTGGAGGACGGCCGGACGTTGAGCGACTACAACATTCAGAAGGAGTC 555591 Query 206364 TACTCTTCAC 206373 || || ||| Sbjct 555590 GACGCTGCAC 555581 Score = 86.0 bits (94), Expect = 1e-11 Identities = 130/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || || || ||||| | || ||||| || || ||||| |||| || ||| Sbjct 556216 ACCGGCAAGACCATCACCCTTGAGGTGGAGAGCTCCGACACCATCGACAATGTCAAGAGC 556157 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| ||||| ||||| || || ||| ||| || | | ||||||||||| ||| Sbjct 556156 AAGATCCAAGACAAAGAGGGCATCCCGCCAGACCAGCAGCGCTTGATCTTCGCCGGCAAG 556097 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 ||| | || ||||| | || | ||||||||||| ||||||| ||||| || || || Sbjct 556096 CAGCTCGAGGATGGCCGCACCCTCTCCGATTACAACATCCAGAAGGAGTCCACCCTCCAT 556037 Query 206374 CTTGT 206378 || || Sbjct 556036 CTCGT 556032 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181816757064907