Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20antarcticum_20[genbank_20GCA_5F002077065.1_20201
7-04-03] 267 sequences; 47,410,550 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq184 109 1e-18
seq228 95.1 3e-14
>seq184
Length=1511567
Score = 109 bits (120), Expect = 1e-18
Identities = 138/190 (73%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
||| || |||||||| || || ||||| | || |||||| || ||||| ||||
Sbjct 735685 CAAGACTCTCACAGGCAAGACCATCACGCTCGAGGTGGAATCATCAGACACGATCGACAA 735626
Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| ||| |||||||| || || || || || || ||| || | || |||||
Sbjct 735625 CGTGAAGTCGAAGATTCAGGATAAGGAGGGTATCCCACCAGACCAGCAGCGTCTCATCTT 735566
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
|||||| ||||||||||| || || ||||||||| ||| |||||| ||||||| |||||
Sbjct 735565 CGCCGGGAAGCAGTTGGAGGACGGCAGGACTTTGAGCGACTACAACATCCAGAAGGAGTC 735506
Query 206364 TACTCTTCAC 206373
|| || |||
Sbjct 735505 GACGCTGCAC 735496
Score = 91.5 bits (100), Expect = 3e-13
Identities = 137/195 (70%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
|||||| | || || || || ||||| | || ||||| || || ||||| ||||
Sbjct 736141 CAAAACCTTGACCGGCAAGACCATCACCCTTGAGGTGGAGAGCTCCGACACCATCGACAA 736082
Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| ||| ||||| ||||| || || || ||| || ||| || | | |||||
Sbjct 736081 TGTCAAGAGCAAGATCCAAGACAAGGAGGGCATTCCTCCAGACCAGCAGCGCTTGATCTT 736022
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
|||||| |||||| | || ||||| | || | |||| |||||| |||||||||||||
Sbjct 736021 CGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTACAACATCCAGAAAGAGTC 735962
Query 206364 TACTCTTCACCTTGT 206378
|| ||||| || ||
Sbjct 735961 CACCCTTCATCTCGT 735947
>seq228
Length=1254254
Score = 95.1 bits (104), Expect = 3e-14
Identities = 135/190 (71%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
||| || |||||||| || || ||||| | || |||||| || |||||| ||||
Sbjct 555770 CAAGACTCTCACAGGCAAGACCATCACGCTCGAGGTGGAATCATCAGACACAATCGACAA 555711
Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| ||| |||||||| || || || || || || || || | ||||||||
Sbjct 555710 CGTGAAGTCGAAGATTCAGGATAAGGAGGGTATCCCACCAGATCAGCAGCGTCTTATCTT 555651
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
||| || ||||||||||| || || |||| ||| ||| |||||| | ||||| |||||
Sbjct 555650 CGCTGGTAAGCAGTTGGAGGACGGCCGGACGTTGAGCGACTACAACATTCAGAAGGAGTC 555591
Query 206364 TACTCTTCAC 206373
|| || |||
Sbjct 555590 GACGCTGCAC 555581
Score = 86.0 bits (94), Expect = 1e-11
Identities = 130/185 (70%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253
|| || || || ||||| | || ||||| || || ||||| |||| || |||
Sbjct 556216 ACCGGCAAGACCATCACCCTTGAGGTGGAGAGCTCCGACACCATCGACAATGTCAAGAGC 556157
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
||||| ||||| ||||| || || ||| ||| || | | ||||||||||| |||
Sbjct 556156 AAGATCCAAGACAAAGAGGGCATCCCGCCAGACCAGCAGCGCTTGATCTTCGCCGGCAAG 556097
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
||| | || ||||| | || | ||||||||||| ||||||| ||||| || || ||
Sbjct 556096 CAGCTCGAGGATGGCCGCACCCTCTCCGATTACAACATCCAGAAGGAGTCCACCCTCCAT 556037
Query 206374 CTTGT 206378
|| ||
Sbjct 556036 CTCGT 556032
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181816757064907
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |