Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rachicladosporium_20antarcticum_20[genbank_20GCA_5F002077065.1_20201 7-04-03] 267 sequences; 47,410,550 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq176 161 9e-35 seq228 95.1 1e-14 >seq176 Length=738521 Score = 161 bits (178), Expect = 9e-35 Identities = 979/1544 (63%), Gaps = 56/1544 (4%) Strand=Plus/Minus Query 146891 GATTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGA-TACACATTGCTAGTGAAA 146949 ||||||| ||||| ||||| || |||| ||||| | |||| || | |||||| ||| | Sbjct 359701 GATTGACGACTTGGAACTCTCCGGCCAAGACACGAC-GAGAGTAGATATTGCTGGTGTAC 359643 Query 146950 GGCTCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCC 147009 |||||||| |||| || ||| | || || | ||| | || || ||||| || Sbjct 359642 GGCTCAAAGCACTCGTTGAAGCCCATGATCTGCGATGTGCTCGCTGTTGGCATAGGAGCA 359583 Query 147010 ACCAACAATGAATTTCGCAGACCGTACGCACGGATGTTGTC--CTTCAAAGTTTGCCAGT 147067 || | || || || || | ||||| |||| | || | ||| | | || ||||| Sbjct 359582 ACGAGTAAGGAGTTGCGAACACCGT--GCACTGCAATTCGCGCCTTGAGGGCTTCCCAGT 359525 Query 147068 CCCACATCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTCCTCGACTGGCGG 147127 |||||| | ||| ||||| |||||||||||| |||||| | || | | || Sbjct 359524 CCCACAAGTCAGTGGGTGTCACACCCCACATGTCGTATTGGAGCTCGCCCTGTGAGATGG 359465 Query 147128 GACTGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCCAATTCACAGCTTGCCTCGA 147187 || ||||| | | || |||| ||| || || | ||||| ||| | Sbjct 359464 GAGAGCCAGGGTAGGTCTCGTAGGGACCGAGCTTCTCAGCAAGGTCACAAGATGCAGTAA 359405 Query 147188 GCGCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAG--GACGGTCGCTTCTTCGCT 147245 | || | | ||| ||||| ||| ||| || | || || |||| ||||| | Sbjct 359404 GTGCGGCGTGGTACATGGTCTCGAAGATCTGCTGATTGAGAAGACGA--GCTTCCTTAGA 359347 Query 147246 CTCGTAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGAT 147305 |||| | ||||| |||||| | |||||| || |||| ||| || ||| | || || Sbjct 359346 CTCGAATGGCATGCGCAGAGCGAGAAAGGCGTCAGCCAGACCGCTGACACCAAGACCAAT 359287 Query 147306 AGGTCGATGCTTTTCGTTGCTGCGCTTCGCGCT-CGCT-ATGGGATAGTGGTTGCGATCA 147363 || | || ||||||| | || ||| | | | || || | |||| || Sbjct 359286 TGGCCTGTGTCGCATGTTGCTGT--TGCGAGCTTCAATCACCGGGTACTTGTTGACTTCG 359229 Query 147364 ATAATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCA 147423 || |||||||| ||||| || || || | || | | ||| |||| ||| || Sbjct 359228 ATGATCTTGTTCAGGTTGCGAGTGACGACCTGTGTGACCTCGTGGAGCTTCTTGAAGTCG 359169 Query 147424 TAAGTCC-CGTCT-----TCGACACGTACGCATTGGTTCACGGCGATAGACGCCAGATTG 147477 || ||| | ||| |||||| || | |||| | || | || || |||||| Sbjct 359168 TATGTCTGCTTCTGAATATCGACA--TATG--TTGGG--AGTGCCAACGATGCAAGATTG 359115 Query 147478 CAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCAT 147537 || || ||| || || | | || |||||| | ||| |||| |||||| ||| || Sbjct 359114 CATACAGCCACTTCATCTGGGGCGGTGTACTCGATGATCTCGGTGCACAGATTGGAGCTG 359055 Query 147538 TTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATG 147597 ||| ||||| |||| ||| ||||| || || ||| |||||||| | |||||| Sbjct 359054 CGAATGGTGCCCAAGTTTTTCTGGTTGCTCTTGCGGTTGGCGGCGTCTTTATACAGCATG 358995 Query 147598 TACGGTCCGCCGGTCTCGACTTGCGTTTCAACGATAAACCTATGCAGGTC--CTGCGCTC 147655 ||||| ||| |||||| || | |||| || | || ||| | ||| || | Sbjct 358994 TACGGGTTGCCAGTCTCGGTCTGAGCCTCAAGAATGG-CATAC-CAGATTTTCTGGGCGC 358937 Query 147656 GCACCCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCGT 147715 ||| || | | || | ||| | ||||| || ||| | | ||||| |||| Sbjct 358936 GCATAGTCTCACCCTTGC---CTTCGCTCTCGTATCGAGTGTAGAGCGCTTCAAATTCGT 358880 Query 147716 CGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGACCACATGTCGT 147775 | ||||| |||||||| |||||||||| | ||| ||||||| | ||| ||| Sbjct 358879 CTCCGTAAACGTCGGCAAGACCGGGACACTCGTTCGGGCACATCAATGTCCAATCAGCGT 358820 Query 147776 CCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCGCGCG 147835 | | || ||| ||| || ||||| || | |||||| ||||| | || || || | Sbjct 358819 TGTCTTGCACACGTTTCATGAAGAGATCGGGAATCCACAGTGCGTAGAACAGGTCACGAG 358760 Query 147836 CTTTGCAATCCTCGGCGC--CCATGTTGCGTTTCAAATT--AAGCACGCTATAGATGTCG 147891 | || | |||| | || || | | | | | | | ||| | ||||||| Sbjct 358759 C---GCGAACCTCCTCCTTGCCGTGGTTCTTACGGAGGTCGAGGAACGACA-AGATGTCT 358704 Query 147892 GCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGCTTT---CCGCCCTGGTCG 147948 |||||||| || |||| ||||| ||| | ||| || |||||| |||||||||||| Sbjct 358703 GCGTGCCATGGCTCAAGGTAGATGGCAAACGCGCCGGGACGCTTGTTGCCGCCCTGGTCG 358644 Query 147949 ACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCCG 148008 |||| | || ||||||| ||||| || | ||||||| | || ||| ||| |||||| Sbjct 358643 ACATATCTAGCCGTGTTGTTGAACACCCGTAGCATGGGTACGAGACCGTTCGATGTGCCG 358584 Query 148009 TTGGT----GGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCCAAT 148064 || || | ||| | | | | ||| | || | ||| |||| | || || Sbjct 358583 TTTGTACCCGCAATGTACGATCCAGTCGCCCGAATGCGAT--GTG--CGTTGAGTCCGAT 358528 Query 148065 GCCGCCGCCGTACTTTGATATGGCAGCGCAATCGCC--CAATGTCGTGTAGATGCCGTCG 148122 ||| ||| ||| || || || || |||| | | || ||| |||||| || || Sbjct 358527 GCCACCGGCGTTTTTCGAGAT--CATCGCACAAGTCTTCAGTGTGTCGTAGATACCCTCA 358470 Query 148123 ATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGTTCCC 148182 || || |||| || | | | | ||| || || || | || | | || || Sbjct 358469 ATACTATCGTCCTTCATGTCGATCAAGAAGCATGAGGCAAGCTGTGCTTGTGGTGTGCCA 358410 Query 148183 GCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGATACGTC 148242 || ||| || || || || || || || | || | ||| | |||||| Sbjct 358409 GCGCTGAACAGCGTTGGCGAAGCATGTGTGAAGTACTTGTTGGACATGTAGTTGTACGTC 358350 Query 148243 TCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGC 148302 ||||| || | |||||||| ||||| || || |||| || || ||||||| ||||||| Sbjct 358349 TCAATCGCCGCATCGATGTCTTCGCCATGTATACCCACTGCCACACGCATGATCATGTGC 358290 Query 148303 TGTGGTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTTTTG 148362 ||||| | || || || | || || ||| |||||| || || || ||| Sbjct 358289 TGTGGCCTCTCCGCGACCTTTCCGTCAATGCGGAGCAGATATGAGCGCTCCAGCGTCTTG 358230 Query 148363 TAACCAAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGC 148406 | |||||||||| ||| | || || | ||||| |||| || Sbjct 358229 AAGCCAAAGTACTGGTAGTTGAAGTCGCGGTCGTAGACGATCGC 358186 >seq228 Length=1254254 Score = 95.1 bits (104), Expect = 1e-14 Identities = 154/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 |||||| |||| ||||| || | | ||||| || ||||||||||||||||||| || Sbjct 555563 ACGCAAACGCAGCACCAAGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCGCTCAACGT 555622 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 || || || | ||| ||||| | |||| |||||||| |||||||| || || || Sbjct 555623 CCGGCCGTCCTCCAACTGCTTACCAGCGAAGATAAGACGCTGCTGATCTGGTGGGATACC 555682 Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081 || ||||| ||| || |||| | || | || || | | ||||| |||| Sbjct 555683 CTCCTTATCCTGAATCTTCGACTTCACGTTGTCGATTGTGTCTGATGATTCCACCTCGAG 555742 Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||| | || || || || ||||| || | ||| || ||||| Sbjct 555743 CGTGATGGTCTTGCCTGTGAGAGTCTTGACGAAGATTTGCAT 555784 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476609609310120