Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20antarcticum_20[genbank_20GCA_5F002077065.1_20201
7-04-03] 267 sequences; 47,410,550 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq176 161 9e-35
seq228 95.1 1e-14
>seq176
Length=738521
Score = 161 bits (178), Expect = 9e-35
Identities = 979/1544 (63%), Gaps = 56/1544 (4%)
Strand=Plus/Minus
Query 146891 GATTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGA-TACACATTGCTAGTGAAA 146949
||||||| ||||| ||||| || |||| ||||| | |||| || | |||||| ||| |
Sbjct 359701 GATTGACGACTTGGAACTCTCCGGCCAAGACACGAC-GAGAGTAGATATTGCTGGTGTAC 359643
Query 146950 GGCTCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCC 147009
|||||||| |||| || ||| | || || | ||| | || || ||||| ||
Sbjct 359642 GGCTCAAAGCACTCGTTGAAGCCCATGATCTGCGATGTGCTCGCTGTTGGCATAGGAGCA 359583
Query 147010 ACCAACAATGAATTTCGCAGACCGTACGCACGGATGTTGTC--CTTCAAAGTTTGCCAGT 147067
|| | || || || || | ||||| |||| | || | ||| | | || |||||
Sbjct 359582 ACGAGTAAGGAGTTGCGAACACCGT--GCACTGCAATTCGCGCCTTGAGGGCTTCCCAGT 359525
Query 147068 CCCACATCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTCCTCGACTGGCGG 147127
|||||| | ||| ||||| |||||||||||| |||||| | || | | ||
Sbjct 359524 CCCACAAGTCAGTGGGTGTCACACCCCACATGTCGTATTGGAGCTCGCCCTGTGAGATGG 359465
Query 147128 GACTGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCCAATTCACAGCTTGCCTCGA 147187
|| ||||| | | || |||| ||| || || | ||||| ||| |
Sbjct 359464 GAGAGCCAGGGTAGGTCTCGTAGGGACCGAGCTTCTCAGCAAGGTCACAAGATGCAGTAA 359405
Query 147188 GCGCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAG--GACGGTCGCTTCTTCGCT 147245
| || | | ||| ||||| ||| ||| || | || || |||| ||||| |
Sbjct 359404 GTGCGGCGTGGTACATGGTCTCGAAGATCTGCTGATTGAGAAGACGA--GCTTCCTTAGA 359347
Query 147246 CTCGTAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGAT 147305
|||| | ||||| |||||| | |||||| || |||| ||| || ||| | || ||
Sbjct 359346 CTCGAATGGCATGCGCAGAGCGAGAAAGGCGTCAGCCAGACCGCTGACACCAAGACCAAT 359287
Query 147306 AGGTCGATGCTTTTCGTTGCTGCGCTTCGCGCT-CGCT-ATGGGATAGTGGTTGCGATCA 147363
|| | || ||||||| | || ||| | | | || || | |||| ||
Sbjct 359286 TGGCCTGTGTCGCATGTTGCTGT--TGCGAGCTTCAATCACCGGGTACTTGTTGACTTCG 359229
Query 147364 ATAATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCA 147423
|| |||||||| ||||| || || || | || | | ||| |||| ||| ||
Sbjct 359228 ATGATCTTGTTCAGGTTGCGAGTGACGACCTGTGTGACCTCGTGGAGCTTCTTGAAGTCG 359169
Query 147424 TAAGTCC-CGTCT-----TCGACACGTACGCATTGGTTCACGGCGATAGACGCCAGATTG 147477
|| ||| | ||| |||||| || | |||| | || | || || ||||||
Sbjct 359168 TATGTCTGCTTCTGAATATCGACA--TATG--TTGGG--AGTGCCAACGATGCAAGATTG 359115
Query 147478 CAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCAT 147537
|| || ||| || || | | || |||||| | ||| |||| |||||| ||| ||
Sbjct 359114 CATACAGCCACTTCATCTGGGGCGGTGTACTCGATGATCTCGGTGCACAGATTGGAGCTG 359055
Query 147538 TTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATG 147597
||| ||||| |||| ||| ||||| || || ||| |||||||| | ||||||
Sbjct 359054 CGAATGGTGCCCAAGTTTTTCTGGTTGCTCTTGCGGTTGGCGGCGTCTTTATACAGCATG 358995
Query 147598 TACGGTCCGCCGGTCTCGACTTGCGTTTCAACGATAAACCTATGCAGGTC--CTGCGCTC 147655
||||| ||| |||||| || | |||| || | || ||| | ||| || |
Sbjct 358994 TACGGGTTGCCAGTCTCGGTCTGAGCCTCAAGAATGG-CATAC-CAGATTTTCTGGGCGC 358937
Query 147656 GCACCCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCGT 147715
||| || | | || | ||| | ||||| || ||| | | ||||| ||||
Sbjct 358936 GCATAGTCTCACCCTTGC---CTTCGCTCTCGTATCGAGTGTAGAGCGCTTCAAATTCGT 358880
Query 147716 CGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGACCACATGTCGT 147775
| ||||| |||||||| |||||||||| | ||| ||||||| | ||| |||
Sbjct 358879 CTCCGTAAACGTCGGCAAGACCGGGACACTCGTTCGGGCACATCAATGTCCAATCAGCGT 358820
Query 147776 CCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCGCGCG 147835
| | || ||| ||| || ||||| || | |||||| ||||| | || || || |
Sbjct 358819 TGTCTTGCACACGTTTCATGAAGAGATCGGGAATCCACAGTGCGTAGAACAGGTCACGAG 358760
Query 147836 CTTTGCAATCCTCGGCGC--CCATGTTGCGTTTCAAATT--AAGCACGCTATAGATGTCG 147891
| || | |||| | || || | | | | | | | ||| | |||||||
Sbjct 358759 C---GCGAACCTCCTCCTTGCCGTGGTTCTTACGGAGGTCGAGGAACGACA-AGATGTCT 358704
Query 147892 GCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGCTTT---CCGCCCTGGTCG 147948
|||||||| || |||| ||||| ||| | ||| || |||||| ||||||||||||
Sbjct 358703 GCGTGCCATGGCTCAAGGTAGATGGCAAACGCGCCGGGACGCTTGTTGCCGCCCTGGTCG 358644
Query 147949 ACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCCG 148008
|||| | || ||||||| ||||| || | ||||||| | || ||| ||| ||||||
Sbjct 358643 ACATATCTAGCCGTGTTGTTGAACACCCGTAGCATGGGTACGAGACCGTTCGATGTGCCG 358584
Query 148009 TTGGT----GGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCCAAT 148064
|| || | ||| | | | | ||| | || | ||| |||| | || ||
Sbjct 358583 TTTGTACCCGCAATGTACGATCCAGTCGCCCGAATGCGAT--GTG--CGTTGAGTCCGAT 358528
Query 148065 GCCGCCGCCGTACTTTGATATGGCAGCGCAATCGCC--CAATGTCGTGTAGATGCCGTCG 148122
||| ||| ||| || || || || |||| | | || ||| |||||| || ||
Sbjct 358527 GCCACCGGCGTTTTTCGAGAT--CATCGCACAAGTCTTCAGTGTGTCGTAGATACCCTCA 358470
Query 148123 ATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGTTCCC 148182
|| || |||| || | | | | ||| || || || | || | | || ||
Sbjct 358469 ATACTATCGTCCTTCATGTCGATCAAGAAGCATGAGGCAAGCTGTGCTTGTGGTGTGCCA 358410
Query 148183 GCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGATACGTC 148242
|| ||| || || || || || || || | || | ||| | ||||||
Sbjct 358409 GCGCTGAACAGCGTTGGCGAAGCATGTGTGAAGTACTTGTTGGACATGTAGTTGTACGTC 358350
Query 148243 TCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGC 148302
||||| || | |||||||| ||||| || || |||| || || ||||||| |||||||
Sbjct 358349 TCAATCGCCGCATCGATGTCTTCGCCATGTATACCCACTGCCACACGCATGATCATGTGC 358290
Query 148303 TGTGGTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTTTTG 148362
||||| | || || || | || || ||| |||||| || || || |||
Sbjct 358289 TGTGGCCTCTCCGCGACCTTTCCGTCAATGCGGAGCAGATATGAGCGCTCCAGCGTCTTG 358230
Query 148363 TAACCAAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGC 148406
| |||||||||| ||| | || || | ||||| |||| ||
Sbjct 358229 AAGCCAAAGTACTGGTAGTTGAAGTCGCGGTCGTAGACGATCGC 358186
>seq228
Length=1254254
Score = 95.1 bits (104), Expect = 1e-14
Identities = 154/222 (69%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961
|||||| |||| ||||| || | | ||||| || ||||||||||||||||||| ||
Sbjct 555563 ACGCAAACGCAGCACCAAGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCGCTCAACGT 555622
Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021
|| || || | ||| ||||| | |||| |||||||| |||||||| || || ||
Sbjct 555623 CCGGCCGTCCTCCAACTGCTTACCAGCGAAGATAAGACGCTGCTGATCTGGTGGGATACC 555682
Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081
|| ||||| ||| || |||| | || | || || | | ||||| ||||
Sbjct 555683 CTCCTTATCCTGAATCTTCGACTTCACGTTGTCGATTGTGTCTGATGATTCCACCTCGAG 555742
Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
||| | || || || || ||||| || | ||| || |||||
Sbjct 555743 CGTGATGGTCTTGCCTGTGAGAGTCTTGACGAAGATTTGCAT 555784
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476609609310120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |