Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20antarcticum_20[genbank_20GCA_5F002077065.1_20201
7-04-03] 267 sequences; 47,410,550 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq112 224 1e-52
seq1 210 3e-48
seq198 109 8e-18
seq176 96.9 5e-14
seq206 93.3 6e-13
seq199 87.8 3e-11
>seq112
Length=1778705
Score = 224 bits (248), Expect = 1e-52
Identities = 364/510 (71%), Gaps = 18/510 (4%)
Strand=Plus/Plus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||||||| |||||||| || ||||| ||||| || || ||||| || |||||| |||| |
Sbjct 1416307 GATATGGCAAATGTAC-AAGAAGGCAGAGGCATCGTTCTGGACAGCAGAGGAGATCGATC 1416365
Query 1455835 TCGGCGCCG-ACACGGTCCACTGG-----GTGTCGCTGAGCGACGACGAGCGCCATTTCA 1455888
| | || | || | | ||||| | ||| | | ||| |||||||| ||||
Sbjct 1416366 T-GTCGAAGGACCTGCACGACTGGAACAAGCGTCTC--AACGATGACGAGCGATTCTTCA 1416422
Query 1455889 TCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCC 1455948
| ||| ||||| ||||| || |||||| || ||||| || ||||||||||| |
Sbjct 1416423 TTTCGCATGTCCTTGCCTTCTT-CGCCGCATCAGACGGCATTGTCAACGAGAACCTGGTC 1416481
Query 1455949 GGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATC 1456008
| || || | ||||| ||| | || ||||| || | || ||||| |||||||||
Sbjct 1416482 GAGCGATTCAGTGGCGAGGTGCAAATACCCGAGGCTCGCTGCTTCTACGGCTTCCAGATC 1416541
Query 1456009 GCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGAC 1456068
|| || ||||||||||| || |||||||| || || |||||||||||| ||| ||
Sbjct 1416542 ATGATGGAGAACATCCACTCCGAGACCTACTCACTACTCATCGACACCTACATCAGCGAA 1416601
Query 1456069 CCGGTCGAGAA-GGAC-CACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAA 1456126
|| ||| || | || ||||||| ||| ||||||| | || | | | || |
Sbjct 1416602 CC--TCGCCAACGCACATACCTCTTCAACGCTATCGACAACATCCCCTGCATCCGCAAGA 1416659
Query 1456127 AGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCT 1456186
|||| ||||||| | |||||||||| | | || || ||||| ||| | | || ||
Sbjct 1416660 AGGCTAACTGGGCACTAAAGTGGATCAGCGACGA-CGCATCGAC-CTTCGGCTGCCGTCT 1416717
Query 1456187 CGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTG 1456245
||| ||| || || || ||||| ||||| ||||| ||| ||| |||||||| ||
Sbjct 1416718 TATCGCCTTCGCAGCTGTTGAGGGTATCTTCTTCTCCGGCTCCTTCGCTGCCATCTTCTG 1416777
Query 1456246 GCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275
||||||||||||||||||||||||||| ||
Sbjct 1416778 GCTCAAGAAGCGCGGCCTCATGCCCGGCCT 1416807
Score = 156 bits (172), Expect = 6e-32
Identities = 232/324 (72%), Gaps = 4/324 (1%)
Strand=Plus/Plus
Query 1456452 TGCACTGTGACTTTGCCTGTCTGCTCTACACGATGCTCGTCAACAAGCCGTCGACCGACG 1456511
||||| ||||||||||| |||| || | ||| ||||||||| || ||||
Sbjct 1416846 TGCACACCGACTTTGCCTGCATGCTGCACGCACATCTCCGCAACAAGCCATCACTCGACC 1416905
Query 1456512 TGCCCAAGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGC 1456571
| | | ||||||||| ||||||||||||||||||| ||||||| | || | |
Sbjct 1416906 TCGTCCACCAGATCATCACCGAGGCCGTCGAGATCGAGCAAGAGTTCCTATCGGACGCCC 1416965
Query 1456572 TGCCGGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGT 1456631
|||| || || ||||||||||||||| |||||||||||||||||| | | |||||
Sbjct 1416966 TGCCCTGCGCACTTCTCGGCATGAACGCCA-AGCTCATGTGCCAGTACATCG-AGTTTGT 1417023
Query 1456632 CGCCGACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGT 1456691
||| ||||| || ||| || |||||| | | ||| ||||| | ||||||| |
Sbjct 1417024 CGCTGACCGTCTACTCCTCGCACTCGGCCACAG-CAAGTACTACAATGCCACCAACCCCT 1417082
Query 1456692 TCCCATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-G 1456750
|| | |||||| ||||| |||| |||||||| ||||| |||||| ||||| |
Sbjct 1417083 TCGACTTCATGGAGAACATCTCCCTCGCCGGCAAGACAAACTTCTTCGAGAAGCGCGTAG 1417142
Query 1456751 GCGAGTACGCCAAGGCCGGCGTCA 1456774
| || ||| ||||| || ||||
Sbjct 1417143 GTGACTACCAAAAGGCTGGTGTCA 1417166
>seq1
Length=1805414
Score = 210 bits (232), Expect = 3e-48
Identities = 361/510 (71%), Gaps = 18/510 (4%)
Strand=Plus/Plus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||||||| | |||||| || ||||| ||||| || || ||||| || |||||| | || |
Sbjct 289382 GATATGGCAGATGTAC-AAGAAGGCAGAGGCATCATTCTGGACAGCAGAGGAGATTGATC 289440
Query 1455835 TCGGCGCC-GACACGGTCCACTGG-----GTGTCGCTGAGCGACGACGAGCGCCATTTCA 1455888
| | || || | | ||||| | ||| | | || |||||||| ||||
Sbjct 289441 T-GTCGAAAGATCTGCACGACTGGAACAAGCGTCTC--AATGATGACGAGCGATTCTTCA 289497
Query 1455889 TCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCC 1455948
| || || || ||||| || |||||| || |||||||| ||||||||||| |
Sbjct 289498 TTTCACATGTGCTTGCCTTCTT-CGCCGCATCAGACGGCATCGTCAACGAGAACCTGGTC 289556
Query 1455949 GGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATC 1456008
| || |||| ||||| ||| | || ||||| || | || ||||| |||||||||
Sbjct 289557 GAGCGATTTAGTGGCGAGGTGCAAATCCCTGAGGCTCGCTGCTTCTACGGCTTCCAGATC 289616
Query 1456009 GCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGAC 1456068
|| || || |||||||| || |||||||| || || |||||||||||| ||| ||
Sbjct 289617 ATGATGGAGAATATCCACTCCGAGACCTACTCACTACTTATCGACACCTACATCAGCGAA 289676
Query 1456069 CCGGTCGAGAA-GGAC-CACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAA 1456126
|| ||| || | || |||||||| ||| ||||||| | |||| | | || |
Sbjct 289677 CC--TCGCCAACGCACATACCTCTTTAACGCTATCGACAATATCCCGTGCATCCGCAAGA 289734
Query 1456127 AGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCT 1456186
||||| ||||||| | |||||||||| | | || || ||||| ||| | | || ||
Sbjct 289735 AGGCCAACTGGGCACTAAAGTGGATCAGCGACGA-CGCATCGAC-CTTCGGCTGCCGTCT 289792
Query 1456187 CGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTG 1456245
| ||| ||| || || ||||||||||| || ||||| || ||| ||| ||||| ||
Sbjct 289793 CATCGCCTTCGCAGCTGTCGAGGGCATTTTCTTCTCTGGTTCGTTCGCCGCTATCTTCTG 289852
Query 1456246 GCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275
||||||||||||||| || |||||||| ||
Sbjct 289853 GCTCAAGAAGCGCGGGCTGATGCCCGGCCT 289882
Score = 140 bits (154), Expect = 5e-27
Identities = 231/326 (71%), Gaps = 8/326 (2%)
Strand=Plus/Plus
Query 1456452 TGCACTGTGACTTTGCCTGTCTGCTCTACACGATGCTCGTCAACAAGCCGTCGACCGACG 1456511
||||| ||||| |||||| |||| || | ||| ||||||||| || ||||
Sbjct 289921 TGCACACCGACTTCGCCTGTATGCTGCACGCACATCTCCGCAACAAGCCATCACTCGACC 289980
Query 1456512 TGCCCAAGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTT--TGTCAGCGAGTC 1456569
| | | ||||||||| || || |||||||||||| ||||||| | ||| || |
Sbjct 289981 TTGTCCACCAGATCATCACGGAAGCTGTCGAGATCGAGCAAGAGTTCCTTTCA--GACGC 290038
Query 1456570 GCTGCCGGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTT 1456629
|| || || || ||||||||||||||| |||||||||||||||||| | | ||
Sbjct 290039 CCTACCCTGCGCACTTCTCGGCATGAACGCCA-AGCTCATGTGCCAGTACATCG-AGTTC 290096
Query 1456630 GTCGCCGACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCC 1456689
||||| |||||||| ||| || |||||| | | ||| ||||| | |||||||
Sbjct 290097 GTCGCTGACCGCCTACTCCTCGCACTCGGCCACAG-CAAGTACTACAACGCCACCAACCC 290155
Query 1456690 GTTCCCATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT 1456749
||| | |||||| ||||| |||| |||||||| ||||| |||||| |||||
Sbjct 290156 CTTCGACTTCATGGAGAACATCTCCCTCGCCGGCAAGACGAACTTCTTCGAGAAGCGCGT 290215
Query 1456750 -GGCGAGTACGCCAAGGCCGGCGTCA 1456774
|| || ||| ||||| || ||||
Sbjct 290216 AGGTGACTACCAGAAGGCTGGTGTCA 290241
>seq198
Length=398492
Score = 109 bits (120), Expect = 8e-18
Identities = 348/535 (65%), Gaps = 10/535 (2%)
Strand=Plus/Plus
Query 262879 TGGGACTGGGACGCACTGCGGGCGTCGGTTCG-ACAGCATGGCCTGCGCAACTCGTTGCT 262937
||||| ||||| || || |||| ||| ||| | ||||||| | |||||||| ||||
Sbjct 355535 TGGGATTGGGAAGCCCTCAAGGCG-CGGATCGCAGTGCATGGCGTCCGCAACTCTCTGCT 355593
Query 262938 CGTGGCGCTCATGCCCACGGCCACGACGTCGCAGATCCTGGGCAACACCGAGGCGTTCGA 262997
||| |||| |||||||| || | || ||||||||| |||| || ||| || ||
Sbjct 355594 CGTCGCGCCTATGCCCACAGCAAGCACATCGCAGATCATGGGGTTCAATGAGTGCTTTGA 355653
Query 262998 GGTCATCACGAGCAACATCTACACGCGCCGCGTGCTCTCGGGCGACTTTACCGTGGTCAA 263057
| ||| |||||||||||| | || || || || | ||||| || || |||||
Sbjct 355654 GCCGTACACCAGCAACATCTACTCTCGTCGTGTCCTGGCCGGCGAGTTCCAAGTCGTCAA 355713
Query 263058 CCGCCACCTGGTCAAGCGCATGGTGGCGCGCGGCCTGTGGACGCCCGACTTTCGCGACCG 263117
|| | ||| ||||| | | || | ||||| |||| | || | ||||
Sbjct 355714 CCCCTGGCTGCTCAAGGACCTTGTCGACATGGGCCTCTGGAGCGACAACATGAAGAACCG 355773
Query 263118 GCTCATTGCGGCACAGGGCTCGGTGCAGGGCTTTGACGACGAGGAGGTGCCGCCCGATCT 263177
|||| || | ||||| | ||| || || | | | || ||| |
Sbjct 355774 CATCATCGCAGATGGTGGCTCTATCCAGCGCATTCCC------AATATCCCCGACGAGAT 355827
Query 263178 CAAGGCTCTCTTCAAGACCGTGTGGGAGGTGCCCAACCGGGTGACCATTGATATGGCGGC 263237
||||| || | ||||| || |||||| | | | || | ||| | ||| | ||
Sbjct 355828 CAAGGAGCTGTATAAGACTGTCTGGGAGATCAGCCAGCGCAACATCATCCAGATGTCAGC 355887
Query 263238 CGACCGCGCGCCCTATGTCGACCAGAGCCAGTCGCTCAACCTGTACCTCGCCGACCCGAC 263297
||| || | ||| |||| ||| ||| ||||| ||| | || | || |||||
Sbjct 355888 CGATCGTGGCGCCTTCATCGATCAGTCCCAATCGCTGAACATCCACATGAAGGAGCCGAC 355947
Query 263298 GGCCGAGAGCATCACGTCGATGCACGCCTATGCGTGGCGTCGCGGCCTCAAGACTGGCAT 263357
| | | |||||||| |||||| | | ||||||| || ||||||||||||||
Sbjct 355948 GATGGGCAAGATCACGTCCATGCACTTCACCGGCTGGCGTCTAGGACTCAAGACTGGCAT 356007
Query 263358 GTACTATCTGCGCACCCGGCCCGCTGCCAACG-CCATTCAATTCACCGTCGATCA 263411
|||||| || |||||| | |||| || || |||| || ||||| ||||||||
Sbjct 356008 GTACTACCTCCGCACCATGGCCGC-CTCAGCGCCCATCCAGTTCACTGTCGATCA 356061
Score = 102 bits (112), Expect = 1e-15
Identities = 131/177 (74%), Gaps = 4/177 (2%)
Strand=Plus/Plus
Query 262092 AGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATGGTCTACA 262151
|||| |||| |||||| ||| ||| || | |||||| |||| || |||||| | ||||
Sbjct 354960 AGATTTGGTATGCCATTCTCGAGGCTCAGACCGAGACTGGCAACCCGTACATGCTGTACA 355019
Query 262152 AGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCA--CGACAGAGGCCAA 262209
| ||||| | ||||| | ||||||||| ||||| ||||||| | || ||| ||||
Sbjct 355020 AAGACGCTGCCAACCGCAAGAGCAACCAGAAGAACTTGGGCACAATTCG-CAGCT-CCAA 355077
Query 262210 CCTGTGCACCGAGATCGTCCAGTTTTCGTCGCCCACCGAGGCAAGTGTGTGCAACCT 262266
| |||||||||||||| || ||| | | || ||| | | ||||||||||||
Sbjct 355078 CTTGTGCACCGAGATCATCGAGTACACCGCTCCTGACGAAGTAGCTGTGTGCAACCT 355134
>seq176
Length=738521
Score = 96.9 bits (106), Expect = 5e-14
Identities = 108/141 (77%), Gaps = 4/141 (3%)
Strand=Plus/Plus
Query 262094 ATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATGGTCTACAAG 262153
||||||| |||||| | | ||| || | |||||| |||| || |||||| | || ||
Sbjct 358948 ATCTGGTATGCCATTCTTGAGGCTCAGACCGAGACTGGCAACCCGTACATGCTGTATAAA 359007
Query 262154 GACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCA--CGACAGAGGCCAACC 262211
||||||| ||||| | ||||||||| | ||| ||||||||| || ||| |||| |
Sbjct 359008 GACGCCGCCAACCGCAAGAGCAACCAGAAAAACTTGGGCACCATTCG-CAGCT-CCAATC 359065
Query 262212 TGTGCACCGAGATCGTCCAGT 262232
|||||||||||||| || |||
Sbjct 359066 TGTGCACCGAGATCATCGAGT 359086
>seq206
Length=1270293
Score = 93.3 bits (102), Expect = 6e-13
Identities = 111/148 (75%), Gaps = 6/148 (4%)
Strand=Plus/Minus
Query 724998 GACATGATCGACCGCATCGGCACCGAGGCCGGTC---GCCTGGCGCGCTCCAACAAGCGC 725054
||||| |||| ||| ||| || |||||| || || | ||| || |||||||
Sbjct 994764 GACATCTTCGAGCGCGTCGCAACAGAGGCC--TCCAAGCTCGCCGC-CTACAACAAGAAG 994708
Query 725055 AACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTG 725114
||| ||| | ||||||| ||||||||| |||||||||| ||| | | ||| || ||
Sbjct 994707 TCCACCATCTCCTCGCGCGAAATCCAGACCTCCGTGCGCCTCATCCTCCCCGGTGAGCTC 994648
Query 725115 GCCAGGCACGCCGTCTCCGAGGGCACCA 725142
|||| ||||||||| |||||||||||||
Sbjct 994647 GCCAAGCACGCCGTGTCCGAGGGCACCA 994620
>seq199
Length=371282
Score = 87.8 bits (96), Expect = 3e-11
Identities = 110/148 (74%), Gaps = 6/148 (4%)
Strand=Plus/Minus
Query 724998 GACATGATCGACCGCATCGGCACCGAGGCCGGTC---GCCTGGCGCGCTCCAACAAGCGC 725054
||||| |||| ||| ||| || |||||| || || | ||| || |||||||
Sbjct 227826 GACATCTTCGAGCGCGTCGCAACAGAGGCC--TCCAAGCTCGCCGC-CTACAACAAGAAG 227770
Query 725055 AACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTG 725114
||| ||| | ||||||| |||||||| |||||||||| ||| | | ||| || ||
Sbjct 227769 TCCACCATCTCCTCGCGCGAAATCCAGACTTCCGTGCGCCTCATCCTTCCCGGTGAGCTC 227710
Query 725115 GCCAGGCACGCCGTCTCCGAGGGCACCA 725142
|||| ||||||||| |||||||||||||
Sbjct 227709 GCCAAGCACGCCGTGTCCGAGGGCACCA 227682
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177785447359254
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