Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rachicladosporium_20antarcticum_20[genbank_20GCA_5F002077065.1_20201 7-04-03] 267 sequences; 47,410,550 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq176 158 1e-33 seq228 131 2e-25 seq198 127 2e-24 seq184 118 1e-21 >seq176 Length=738521 Score = 158 bits (174), Expect = 1e-33 Identities = 553/855 (65%), Gaps = 24/855 (3%) Strand=Plus/Plus Query 7564 CAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTG 7623 || |||||| | |||| ||||| ||||| || || ||||||||||| || || || | Sbjct 358288 CAGCACATGATCATGCGTGTGGCAGTGGGTATACATGGCGAAGACATCGATGCGGCGATT 358347 Query 7624 GAAACGTACCAAATGATGTCTTTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTGCC 7683 || |||||| | ||||| || | || || || |||||||| || |||| | Sbjct 358348 GAGACGTACAACTACATGTCCAACAAGTACTTCACACATGCTTCGCCAACGCTGTTCAGC 358407 Query 7684 GCGGGCACAA-ACGCGCCTCAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAG 7742 || |||||| || || ||| |||| || || ||| | |||| || || || Sbjct 358408 GCTGGCACACCACAAGCACAGCTTG-CCTCATGCTTCTTGATCGACATGAAGGACGATAG 358466 Query 7743 CATCGACGGCATTTACAACACGCTGCGCGATTGCGCCAATATTTCCAAATACGGCGGCGG 7802 || || || || ||| |||| ||| ||| || | || || ||| ||| ||| || Sbjct 358467 TATTGAGGGTATCTACGACACACTGAAGACTTGTGCGATGATCTCGAAAAACGCCGGTGG 358526 Query 7803 AATAGGTCTGAACGTAAACGACGTGCGCGCCAACGGTAGCCGCATCGTGTCCACCAACGG 7862 || || || |||| | | | | || || | || ||| | | || ||||| Sbjct 358527 CATCGGACTCAACGCACATCGCATTCGGGCGACTGGATCGTACATTGCGGGTACAAACGG 358586 Query 7863 AAAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCGACATGTAGA 7922 | | | | |||| | | |||||| | || |||||||| ||| ||| || |||| || Sbjct 358587 CACATCGAACGGTCTCGTACCCATGCTACGGGTGTTCAACAACACGGCTAGATATGTCGA 358646 Query 7923 CCAGGGGGGAAA---GCGCAAAGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACGCGGA 7979 |||||| || || ||| ||||| ||||||||| | ||||| |||||||| || Sbjct 358647 CCAGGGCGGCAACAAGCGTCCCGGCGCGTTTGCCATCTACCTTGAGCCATGGCACGCAGA 358706 Query 7980 CATTTACGCAGTGCTAAATCTGCGTCGCAACATGGGTTGCGAAGACAGCAAAGCGCGCGA 8039 ||| | | | || | || ||| ||| || || || || || || Sbjct 358707 CATCTTGTCGTTCCTCGACCTCCGTAAGAACCACGGCAAGGAGGAGGTTCGCGCTCGTGA 358766 Query 8040 TCTATTCTTCGGATTGTGGGTGCCCGATCTGTTTATGAGGCGCGTTCATTTCGACGCACA 8099 || |||| || | ||||| | |||||||| || |||| || || || | |||| | Sbjct 358767 CCTGTTCTACGCACTGTGGATTCCCGATCTCTTCATGAAACGTGTGCAAGACAACGCTGA 358826 Query 8100 ATGGTCGCTCATGTGCCCCGATCGT-TG-CCCTTTATTAAAAAACGTTTACGGTTCAAAA 8157 ||| | | |||||||| || || || ||| | || | ||||||||| || Sbjct 358827 TTGGACATTGATGTGCCC-GAACGAGTGTCCCGGTCTTGCCGA-CGTTTACGGAGACGAA 358884 Query 8158 TTTGAACAATTGTACAAACAATACGAACACGACGGCGCGTACGTGCGGCAAGTGAAAGCG 8217 |||||| | |||| | |||||| ||| ||| | ||| | | | | Sbjct 358885 TTTGAAGCGCTCTACACTCGATACGAGAGCGAAGGCAAGG--GTGAGACTAT-------G 358935 Query 8218 CGCGACCTGCACCGC------GCCATTATCGAATGTCAAAACGAAACCGGTATGCCGTAC 8271 |||| || | | | |||||| | || ||| | ||| || || | |||||| Sbjct 358936 CGCGCCCAGAAAATCTGGTATGCCATTCTTGAGGCTCAGACCGAGACTGGCAACCCGTAC 358995 Query 8272 ATGCTGTACAAAGACGCTTGCAACGCCAAAAGCAATCAAAGCAACGTGGGCACCATTTGT 8331 |||||||| |||||||| |||| ||| ||||| || | ||| ||||||||||| | Sbjct 358996 ATGCTGTATAAAGACGCCGCCAACCGCAAGAGCAACCAGAAAAACTTGGGCACCATTCGC 359055 Query 8332 TGCAGCAATCTGTGCGCTGAAATTGTACAGTACAGCGCGCCCGACGAAGTGGCCGTTTGC 8391 || |||||||||| | || || | |||||| ||| || || |||||||| || ||| Sbjct 359056 AGCTCCAATCTGTGCACCGAGATCATCGAGTACACCGCCCCAGATGAAGTGGCTGTATGC 359115 Query 8392 AATCTAGCGTCGGTG 8406 ||||| || ||| || Sbjct 359116 AATCTTGCATCGTTG 359130 >seq228 Length=1254254 Score = 131 bits (144), Expect = 2e-25 Identities = 160/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 134499 CGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC-CAACGGTGTGAGA 134557 |||| ||| | ||| ||||| || ||||| |||||||||||||||| |||| || | Sbjct 555570 CGCAGCACCAAGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCGCTCAAC-GTCCGGCC 555628 Query 134558 GTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTT 134617 ||| || | ||| || || || || || | |||||||||||| || || || || || || Sbjct 555629 GTCCTCCAACTGCTTACCAGCGAAGATAAGACGCTGCTGATCTGGTGGGATACCCTCCTT 555688 Query 134618 TTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAAT 134677 || ||||| || || || ||| | |||||| || |||||||| ||||| || || Sbjct 555689 ATCCTGAATCTTCGACTTCACGTTGTCGATTGTGTCTGATGATTCCACCTCGAGCGTGAT 555748 Query 134678 GGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||| || || || | ||| || ||||| |||||||| Sbjct 555749 GGTCTTGCCTGTGAGAGTCTTGACGAAGATTTGCAT 555784 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | |||||||| || || |||||||| || |||||||||||| | Sbjct 555786 CCACCGCGGAGGCGAAGGACGAGGTGGAGAGTCGATTCCTTCTGGATGTTGTAGTCGGAA 555845 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || || ||| |||||||| ||||| || || || | |||||||| || || || Sbjct 555846 AGAGTACGACCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCTGGAGGA 555905 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || || || || || || || ||| | |||||||| || || || Sbjct 555906 ATACCCTCCTTATCCTGGATCTTCGACTTCACGTTGTCGATGGTGTCGGAGGACTCAACC 555965 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || ||||| || || || | || || ||||| || ||||| Sbjct 555966 TCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 556012 Score = 93.3 bits (102), Expect = 4e-14 Identities = 105/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 134481 GCCTTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAG 134540 ||| | || || | ||| |||| || ||||| || || || ||||| || ||||||||| Sbjct 1165079 GCCATACCACCACGGAGGCGCAGGACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAG 1165020 Query 134541 TCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCG 134600 ||| || |||| | ||| |||||||| ||||| || || ||||| |||||||| || Sbjct 1165019 TCGGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCA 1164960 Query 134601 GGCGGTATGCCTTCTTTTTCT 134621 || || || || || || ||| Sbjct 1164959 GGTGGGATACCCTCCTTGTCT 1164939 >seq198 Length=398492 Score = 127 bits (140), Expect = 2e-24 Identities = 541/847 (64%), Gaps = 16/847 (2%) Strand=Plus/Plus Query 7564 CAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTG 7623 || |||||| | |||| || || || || || |||||||| |||||||| || || | Sbjct 354302 CAGCACATGATCATGCGTGTCGCTGTAGGTATACACGGCGAGGACATTGATGCGGCGATC 354361 Query 7624 GAAACGTACCAAATGATGTCTTTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTGCC 7683 || |||||| | ||||| || | || || || |||||||| || |||| | Sbjct 354362 GAGACGTACAACTACATGTCCAACAAGTATTTCACACATGCTTCGCCGACGCTGTTCAGC 354421 Query 7684 GCGGGCACAAACGCGCCTCAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAGC 7743 || |||||| | ||| | | || || || || | |||| || |||||| Sbjct 354422 GCTGGCACACCTCAAGCACAACTTGCTTCATGCTTCCTGATCGACATGAAGGACGACAGC 354481 Query 7744 ATCGACGGCATTTACAACACGCTGCGCGATTGCGCCAATATTTCCAAATACGGCGGCGGA 7803 || || ||||||||| |||||||| ||| || | || || ||| ||| ||| || Sbjct 354482 ATTGAGGGCATTTACGACACGCTGAAGACTTGTGCGATGATCTCGAAAAACGCCGGTGGC 354541 Query 7804 ATAGGTCTGAACGTAAACGACGTGCGCGCCAACGGTAGCCGCATCGTGTCCACCAACGGA 7863 || || || |||| | | | | || || | || ||| | | || || || Sbjct 354542 ATCGGACTCAACGCACATCGCATTCGGGCGACTGGCTCGTACATTGCGGGTACAAATGGC 354601 Query 7864 AAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCGACATGTAGAC 7923 | | | | |||| | | |||||| | || |||||||| ||| | | | |||| ||| Sbjct 354602 ACATCAAACGGTCTCGTACCCATGCTACGGGTGTTCAACAACACTGCTAGGTATGTCGAC 354661 Query 7924 CAGGGGGGAAA---GCGCAAAGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACGCGGAC 7980 ||||| || || ||| ||||| |||||||| | |||||||||||||| ||| Sbjct 354662 CAGGGTGGCAACAAGCGACCCGGCGCATTCGCCATCTACCTCGAGCCGTGGCACGCAGAC 354721 Query 7981 ATTTACGCAGTGCTAAATCTGCGTCGCAACATGGGTTGCGAAGACAGCAAAGCGCGCGAT 8040 || | | | || | ||||| ||| || || || | || || || Sbjct 354722 ATCTTGTCCTTCCTTGACCTGCGCAAGAACCACGGCAAGGAGGAGGTCCGCGCTCGTGAC 354781 Query 8041 CTATTCTTCGGATTGTGGGTGCCCGATCTGTTTATGAGGCGCGTTCATTTCGACGCACAA 8100 | |||| || ||||| | || ||||| || |||| ||| || || |||| | Sbjct 354782 TTGTTCTACGCTCTGTGGATCCCTGATCTCTTCATGAAGCGTGTGCAAGATAACGCTGAT 354841 Query 8101 TGGTCGCTCATGTGCCCCGATCGT-TGCCCTTTATTAAAAAACGTTTACGGTTCAAAATT 8159 ||| | || |||||||| || || ||||| | | || ||||| | || Sbjct 354842 TGGACACTGATGTGCCC-GAACGAGTGCCCCGGCCTTGCCGATGTGTACGGGGATGAGTT 354900 Query 8160 TGAACAATTGTACAAACAATACGAACACGACGGCGCGTACGTGCGGCAAGTGAAAGCGCG 8219 ||| | |||| || |||||| ||| ||| | ||| | | | || |||| Sbjct 354901 CGAAGCGCTCTACACACGGTACGAAAGCGAAGGCAAGG--GTGAGACTA-TGC--GCGCC 354955 Query 8220 C----GACCTGCACCGCGCCATTATCGAATGTCAAAACGAAACCGGTATGCCGTACATGC 8275 | || || || |||| |||| ||| | ||| || || | |||||||||| Sbjct 354956 CAGAAGATTTGGTATGC--CATTCTCGAGGCTCAGACCGAGACTGGCAACCCGTACATGC 355013 Query 8276 TGTACAAAGACGCTTGCAACGCCAAAAGCAATCAAAGCAACGTGGGCACCATTTGTTGCA 8335 |||||||||||||| |||| ||| ||||| || | ||| ||||||| ||| | || Sbjct 355014 TGTACAAAGACGCTGCCAACCGCAAGAGCAACCAGAAGAACTTGGGCACAATTCGCAGCT 355073 Query 8336 GCAATCTGTGCGCTGAAATTGTACAGTACAGCGCGCCCGACGAAGTGGCCGTTTGCAATC 8395 ||| ||||| | || || | |||||| ||| || |||||||| || || ||||| | Sbjct 355074 CCAACTTGTGCACCGAGATCATCGAGTACACCGCTCCTGACGAAGTAGCTGTGTGCAACC 355133 Query 8396 TAGCGTC 8402 | || || Sbjct 355134 TTGCATC 355140 >seq184 Length=1511567 Score = 118 bits (130), Expect = 1e-21 Identities = 146/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 ||||| || || ||||| || || || |||||||||||| | |||| | || ||| Sbjct 735947 ACGAGATGAAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCG 736006 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| ||||| || || ||||| |||||||| || || || ||||| || || ||||| Sbjct 736007 AGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCTTGG 736066 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || ||||| ||| | |||||||| ||||| || || || ||||| || Sbjct 736067 ATCTTGCTCTTGACATTGTCGATGGTGTCGGAGCTCTCCACCTCAAGGGTGATGGTCTTG 736126 Query 134685 CCGGTTAAAGTTTTAACGAA 134704 ||||| || ||||| ||||| Sbjct 736127 CCGGTCAAGGTTTTGACGAA 736146 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC-C 134545 ||||| | || || | ||| | ||| ||||| || ||||| || ||||||||||||| | Sbjct 735473 CCTCCACGCAGACGTAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 735532 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || | || ||| || | ||| || || || || || | ||||||||| || || || Sbjct 735533 AAAGTCCTGCC-GTCCTCCAACTGCTTCCCGGCGAAGATGAGACGCTGCTGGTCTGGTGG 735591 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || || || || || ||||| || || || ||| | ||||| || |||||||| Sbjct 735592 GATACCCTCCTTATCCTGAATCTTCGACTTCACGTTGTCGATCGTGTCTGATGATTCCAC 735651 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || ||||| || || || | ||| || |||||||||||||| Sbjct 735652 CTCGAGCGTGATGGTCTTGCCTGTGAGAGTCTTGACGAAAATTTGCAT 735699 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505396713232840