Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20antarcticum_20[genbank_20GCA_5F002077065.1_20201
7-04-03] 267 sequences; 47,410,550 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq176 158 1e-33
seq228 131 2e-25
seq198 127 2e-24
seq184 118 1e-21
>seq176
Length=738521
Score = 158 bits (174), Expect = 1e-33
Identities = 553/855 (65%), Gaps = 24/855 (3%)
Strand=Plus/Plus
Query 7564 CAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTG 7623
|| |||||| | |||| ||||| ||||| || || ||||||||||| || || || |
Sbjct 358288 CAGCACATGATCATGCGTGTGGCAGTGGGTATACATGGCGAAGACATCGATGCGGCGATT 358347
Query 7624 GAAACGTACCAAATGATGTCTTTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTGCC 7683
|| |||||| | ||||| || | || || || |||||||| || |||| |
Sbjct 358348 GAGACGTACAACTACATGTCCAACAAGTACTTCACACATGCTTCGCCAACGCTGTTCAGC 358407
Query 7684 GCGGGCACAA-ACGCGCCTCAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAG 7742
|| |||||| || || ||| |||| || || ||| | |||| || || ||
Sbjct 358408 GCTGGCACACCACAAGCACAGCTTG-CCTCATGCTTCTTGATCGACATGAAGGACGATAG 358466
Query 7743 CATCGACGGCATTTACAACACGCTGCGCGATTGCGCCAATATTTCCAAATACGGCGGCGG 7802
|| || || || ||| |||| ||| ||| || | || || ||| ||| ||| ||
Sbjct 358467 TATTGAGGGTATCTACGACACACTGAAGACTTGTGCGATGATCTCGAAAAACGCCGGTGG 358526
Query 7803 AATAGGTCTGAACGTAAACGACGTGCGCGCCAACGGTAGCCGCATCGTGTCCACCAACGG 7862
|| || || |||| | | | | || || | || ||| | | || |||||
Sbjct 358527 CATCGGACTCAACGCACATCGCATTCGGGCGACTGGATCGTACATTGCGGGTACAAACGG 358586
Query 7863 AAAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCGACATGTAGA 7922
| | | | |||| | | |||||| | || |||||||| ||| ||| || |||| ||
Sbjct 358587 CACATCGAACGGTCTCGTACCCATGCTACGGGTGTTCAACAACACGGCTAGATATGTCGA 358646
Query 7923 CCAGGGGGGAAA---GCGCAAAGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACGCGGA 7979
|||||| || || ||| ||||| ||||||||| | ||||| |||||||| ||
Sbjct 358647 CCAGGGCGGCAACAAGCGTCCCGGCGCGTTTGCCATCTACCTTGAGCCATGGCACGCAGA 358706
Query 7980 CATTTACGCAGTGCTAAATCTGCGTCGCAACATGGGTTGCGAAGACAGCAAAGCGCGCGA 8039
||| | | | || | || ||| ||| || || || || || ||
Sbjct 358707 CATCTTGTCGTTCCTCGACCTCCGTAAGAACCACGGCAAGGAGGAGGTTCGCGCTCGTGA 358766
Query 8040 TCTATTCTTCGGATTGTGGGTGCCCGATCTGTTTATGAGGCGCGTTCATTTCGACGCACA 8099
|| |||| || | ||||| | |||||||| || |||| || || || | |||| |
Sbjct 358767 CCTGTTCTACGCACTGTGGATTCCCGATCTCTTCATGAAACGTGTGCAAGACAACGCTGA 358826
Query 8100 ATGGTCGCTCATGTGCCCCGATCGT-TG-CCCTTTATTAAAAAACGTTTACGGTTCAAAA 8157
||| | | |||||||| || || || ||| | || | ||||||||| ||
Sbjct 358827 TTGGACATTGATGTGCCC-GAACGAGTGTCCCGGTCTTGCCGA-CGTTTACGGAGACGAA 358884
Query 8158 TTTGAACAATTGTACAAACAATACGAACACGACGGCGCGTACGTGCGGCAAGTGAAAGCG 8217
|||||| | |||| | |||||| ||| ||| | ||| | | | |
Sbjct 358885 TTTGAAGCGCTCTACACTCGATACGAGAGCGAAGGCAAGG--GTGAGACTAT-------G 358935
Query 8218 CGCGACCTGCACCGC------GCCATTATCGAATGTCAAAACGAAACCGGTATGCCGTAC 8271
|||| || | | | |||||| | || ||| | ||| || || | ||||||
Sbjct 358936 CGCGCCCAGAAAATCTGGTATGCCATTCTTGAGGCTCAGACCGAGACTGGCAACCCGTAC 358995
Query 8272 ATGCTGTACAAAGACGCTTGCAACGCCAAAAGCAATCAAAGCAACGTGGGCACCATTTGT 8331
|||||||| |||||||| |||| ||| ||||| || | ||| ||||||||||| |
Sbjct 358996 ATGCTGTATAAAGACGCCGCCAACCGCAAGAGCAACCAGAAAAACTTGGGCACCATTCGC 359055
Query 8332 TGCAGCAATCTGTGCGCTGAAATTGTACAGTACAGCGCGCCCGACGAAGTGGCCGTTTGC 8391
|| |||||||||| | || || | |||||| ||| || || |||||||| || |||
Sbjct 359056 AGCTCCAATCTGTGCACCGAGATCATCGAGTACACCGCCCCAGATGAAGTGGCTGTATGC 359115
Query 8392 AATCTAGCGTCGGTG 8406
||||| || ||| ||
Sbjct 359116 AATCTTGCATCGTTG 359130
>seq228
Length=1254254
Score = 131 bits (144), Expect = 2e-25
Identities = 160/216 (74%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 134499 CGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC-CAACGGTGTGAGA 134557
|||| ||| | ||| ||||| || ||||| |||||||||||||||| |||| || |
Sbjct 555570 CGCAGCACCAAGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCGCTCAAC-GTCCGGCC 555628
Query 134558 GTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTT 134617
||| || | ||| || || || || || | |||||||||||| || || || || || ||
Sbjct 555629 GTCCTCCAACTGCTTACCAGCGAAGATAAGACGCTGCTGATCTGGTGGGATACCCTCCTT 555688
Query 134618 TTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAAT 134677
|| ||||| || || || ||| | |||||| || |||||||| ||||| || ||
Sbjct 555689 ATCCTGAATCTTCGACTTCACGTTGTCGATTGTGTCTGATGATTCCACCTCGAGCGTGAT 555748
Query 134678 GGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||| || || || | ||| || ||||| ||||||||
Sbjct 555749 GGTCTTGCCTGTGAGAGTCTTGACGAAGATTTGCAT 555784
Score = 113 bits (124), Expect = 5e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | |||||||| || || |||||||| || |||||||||||| |
Sbjct 555786 CCACCGCGGAGGCGAAGGACGAGGTGGAGAGTCGATTCCTTCTGGATGTTGTAGTCGGAA 555845
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| || || ||| |||||||| ||||| || || || | |||||||| || || ||
Sbjct 555846 AGAGTACGACCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCTGGAGGA 555905
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| || || || || || || || || || ||| | |||||||| || || ||
Sbjct 555906 ATACCCTCCTTATCCTGGATCTTCGACTTCACGTTGTCGATGGTGTCGGAGGACTCAACC 555965
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| || ||||| || || || | || || ||||| || |||||
Sbjct 555966 TCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 556012
Score = 93.3 bits (102), Expect = 4e-14
Identities = 105/141 (74%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 134481 GCCTTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAG 134540
||| | || || | ||| |||| || ||||| || || || ||||| || |||||||||
Sbjct 1165079 GCCATACCACCACGGAGGCGCAGGACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAG 1165020
Query 134541 TCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCG 134600
||| || |||| | ||| |||||||| ||||| || || ||||| |||||||| ||
Sbjct 1165019 TCGGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCA 1164960
Query 134601 GGCGGTATGCCTTCTTTTTCT 134621
|| || || || || || |||
Sbjct 1164959 GGTGGGATACCCTCCTTGTCT 1164939
>seq198
Length=398492
Score = 127 bits (140), Expect = 2e-24
Identities = 541/847 (64%), Gaps = 16/847 (2%)
Strand=Plus/Plus
Query 7564 CAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTG 7623
|| |||||| | |||| || || || || || |||||||| |||||||| || || |
Sbjct 354302 CAGCACATGATCATGCGTGTCGCTGTAGGTATACACGGCGAGGACATTGATGCGGCGATC 354361
Query 7624 GAAACGTACCAAATGATGTCTTTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTGCC 7683
|| |||||| | ||||| || | || || || |||||||| || |||| |
Sbjct 354362 GAGACGTACAACTACATGTCCAACAAGTATTTCACACATGCTTCGCCGACGCTGTTCAGC 354421
Query 7684 GCGGGCACAAACGCGCCTCAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAGC 7743
|| |||||| | ||| | | || || || || | |||| || ||||||
Sbjct 354422 GCTGGCACACCTCAAGCACAACTTGCTTCATGCTTCCTGATCGACATGAAGGACGACAGC 354481
Query 7744 ATCGACGGCATTTACAACACGCTGCGCGATTGCGCCAATATTTCCAAATACGGCGGCGGA 7803
|| || ||||||||| |||||||| ||| || | || || ||| ||| ||| ||
Sbjct 354482 ATTGAGGGCATTTACGACACGCTGAAGACTTGTGCGATGATCTCGAAAAACGCCGGTGGC 354541
Query 7804 ATAGGTCTGAACGTAAACGACGTGCGCGCCAACGGTAGCCGCATCGTGTCCACCAACGGA 7863
|| || || |||| | | | | || || | || ||| | | || || ||
Sbjct 354542 ATCGGACTCAACGCACATCGCATTCGGGCGACTGGCTCGTACATTGCGGGTACAAATGGC 354601
Query 7864 AAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCGACATGTAGAC 7923
| | | | |||| | | |||||| | || |||||||| ||| | | | |||| |||
Sbjct 354602 ACATCAAACGGTCTCGTACCCATGCTACGGGTGTTCAACAACACTGCTAGGTATGTCGAC 354661
Query 7924 CAGGGGGGAAA---GCGCAAAGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACGCGGAC 7980
||||| || || ||| ||||| |||||||| | |||||||||||||| |||
Sbjct 354662 CAGGGTGGCAACAAGCGACCCGGCGCATTCGCCATCTACCTCGAGCCGTGGCACGCAGAC 354721
Query 7981 ATTTACGCAGTGCTAAATCTGCGTCGCAACATGGGTTGCGAAGACAGCAAAGCGCGCGAT 8040
|| | | | || | ||||| ||| || || || | || || ||
Sbjct 354722 ATCTTGTCCTTCCTTGACCTGCGCAAGAACCACGGCAAGGAGGAGGTCCGCGCTCGTGAC 354781
Query 8041 CTATTCTTCGGATTGTGGGTGCCCGATCTGTTTATGAGGCGCGTTCATTTCGACGCACAA 8100
| |||| || ||||| | || ||||| || |||| ||| || || |||| |
Sbjct 354782 TTGTTCTACGCTCTGTGGATCCCTGATCTCTTCATGAAGCGTGTGCAAGATAACGCTGAT 354841
Query 8101 TGGTCGCTCATGTGCCCCGATCGT-TGCCCTTTATTAAAAAACGTTTACGGTTCAAAATT 8159
||| | || |||||||| || || ||||| | | || ||||| | ||
Sbjct 354842 TGGACACTGATGTGCCC-GAACGAGTGCCCCGGCCTTGCCGATGTGTACGGGGATGAGTT 354900
Query 8160 TGAACAATTGTACAAACAATACGAACACGACGGCGCGTACGTGCGGCAAGTGAAAGCGCG 8219
||| | |||| || |||||| ||| ||| | ||| | | | || ||||
Sbjct 354901 CGAAGCGCTCTACACACGGTACGAAAGCGAAGGCAAGG--GTGAGACTA-TGC--GCGCC 354955
Query 8220 C----GACCTGCACCGCGCCATTATCGAATGTCAAAACGAAACCGGTATGCCGTACATGC 8275
| || || || |||| |||| ||| | ||| || || | ||||||||||
Sbjct 354956 CAGAAGATTTGGTATGC--CATTCTCGAGGCTCAGACCGAGACTGGCAACCCGTACATGC 355013
Query 8276 TGTACAAAGACGCTTGCAACGCCAAAAGCAATCAAAGCAACGTGGGCACCATTTGTTGCA 8335
|||||||||||||| |||| ||| ||||| || | ||| ||||||| ||| | ||
Sbjct 355014 TGTACAAAGACGCTGCCAACCGCAAGAGCAACCAGAAGAACTTGGGCACAATTCGCAGCT 355073
Query 8336 GCAATCTGTGCGCTGAAATTGTACAGTACAGCGCGCCCGACGAAGTGGCCGTTTGCAATC 8395
||| ||||| | || || | |||||| ||| || |||||||| || || ||||| |
Sbjct 355074 CCAACTTGTGCACCGAGATCATCGAGTACACCGCTCCTGACGAAGTAGCTGTGTGCAACC 355133
Query 8396 TAGCGTC 8402
| || ||
Sbjct 355134 TTGCATC 355140
>seq184
Length=1511567
Score = 118 bits (130), Expect = 1e-21
Identities = 146/200 (73%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564
||||| || || ||||| || || || |||||||||||| | |||| | || |||
Sbjct 735947 ACGAGATGAAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCG 736006
Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624
||||| ||||| || || ||||| |||||||| || || || ||||| || || |||||
Sbjct 736007 AGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCTTGG 736066
Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684
|| || ||||| ||| | |||||||| ||||| || || || ||||| ||
Sbjct 736067 ATCTTGCTCTTGACATTGTCGATGGTGTCGGAGCTCTCCACCTCAAGGGTGATGGTCTTG 736126
Query 134685 CCGGTTAAAGTTTTAACGAA 134704
||||| || ||||| |||||
Sbjct 736127 CCGGTCAAGGTTTTGACGAA 736146
Score = 116 bits (128), Expect = 4e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC-C 134545
||||| | || || | ||| | ||| ||||| || ||||| || ||||||||||||| |
Sbjct 735473 CCTCCACGCAGACGTAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 735532
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|| | || ||| || | ||| || || || || || | ||||||||| || || ||
Sbjct 735533 AAAGTCCTGCC-GTCCTCCAACTGCTTCCCGGCGAAGATGAGACGCTGCTGGTCTGGTGG 735591
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| || || || || ||||| || || || ||| | ||||| || ||||||||
Sbjct 735592 GATACCCTCCTTATCCTGAATCTTCGACTTCACGTTGTCGATCGTGTCTGATGATTCCAC 735651
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| || ||||| || || || | ||| || ||||||||||||||
Sbjct 735652 CTCGAGCGTGATGGTCTTGCCTGTGAGAGTCTTGACGAAAATTTGCAT 735699
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505396713232840
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